Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0080421 Rosa chinensis HOM05D004698 ORTHO05D005699 1.9e-50 202.2 101 100.0
RcHm_v2.0_Chr5g0080391 Rosa chinensis HOM05D004698 ORTHO05D005699 6.7e-40 167.2 88 94.3
FAN16G2726 Fragaria x ananassa HOM05D004698 ORTHO05D005699 9.0e-37 156.8 87 89.7
FAN25G1145 Fragaria x ananassa HOM05D004698 ORTHO05D005699 9.0e-37 156.8 87 89.7
FAN21G3006 Fragaria x ananassa HOM05D004698 ORTHO05D005699 2.0e-36 155.6 87 88.5
FvH4_3g44090 Fragaria vesca HOM05D004698 ORTHO05D005699 4.5e-36 154.5 87 87.4
FAN11G2375 Fragaria x ananassa HOM05D004698 ORTHO05D005699 4.5e-36 154.5 87 87.4
COL.COLO4_10392 Corchorus olitorius HOM05D004698 ORTHO05D005699 9.3e-34 146.7 99 72.7
Prupe.6G018000 Prunus persica HOM05D004698 ORTHO05D005699 1.6e-33 146.0 88 83.0
Ciclev10016541m.g Citrus clementina HOM05D004698 ORTHO05D005699 4.6e-33 144.4 86 79.1
MELO3C015673.2 Cucumis melo HOM05D004698 ORTHO05D005699 1.0e-32 143.3 87 80.5
MD03G1018500 Malus domestica HOM05D004698 ORTHO05D005699 1.3e-32 142.9 88 81.8
Dinv36316 Davidia involucrata HOM05D004698 ORTHO05D005699 1.8e-32 142.5 84 81.0
CsaV3_1G042380 Cucumis sativus L. HOM05D004698 ORTHO05D005699 2.3e-32 142.1 87 79.3
Dinv08060 Davidia involucrata HOM05D004698 ORTHO05D005699 3.0e-32 141.7 84 79.8
CiPaw.13G168500 Carya illinoinensis HOM05D004698 ORTHO05D005699 3.9e-32 141.4 84 81.0
Potri.001G013700 Populus trichocarpa HOM05D004698 ORTHO05D005699 3.9e-32 141.4 84 79.8
PSO339G6590 Papaver somniferum HOM05D004698 ORTHO05D005699 6.7e-32 140.6 86 80.2
Aqoxy1G00174 Aquilegia oxysepala HOM05D004698 ORTHO05D005699 8.7e-32 140.2 84 81.0
Sabra01G0010100 Salix brachista HOM05D004698 ORTHO05D005699 1.1e-31 139.8 88 76.1
Haze_23028 Corylus avellana HOM05D004698 ORTHO05D005699 1.5e-31 139.4 86 76.7
Nn2g15650 Nelumbo nucifera HOM05D004698 ORTHO05D005699 1.5e-31 139.4 84 77.4
Cfa009658 Carpinus fangiana HOM05D004698 ORTHO05D005699 2.5e-31 138.7 83 79.5
ClCG03G013670 Citrullus lanatus HOM05D004698 ORTHO05D005699 5.7e-31 137.5 83 78.3
Nn7g36023 Nelumbo nucifera HOM05D004698 ORTHO05D005699 5.7e-31 137.5 88 71.6
Atru.chr3.2431 Acer truncatum HOM05D004698 ORTHO05D005699 7.4e-31 137.1 84 77.4
Sc09g0000410 Simmondsia chinensis HOM05D004698 ORTHO05D005699 7.4e-31 137.1 88 73.9
Atru.chr3.2436 Acer truncatum HOM05D004698 ORTHO05D005699 1.3e-30 136.3 84 76.2
QL01p009119 Quercus lobata HOM05D004698 ORTHO05D005699 1.6e-30 136.0 84 72.6
Duzib150G1219 Durio zibethinus HOM05D004698 ORTHO05D005699 2.2e-30 135.6 84 72.6
Hma1.2p1_0183F.1_g080820 Hydrangea macrophylla HOM05D004698 ORTHO05D005699 2.8e-30 135.2 87 75.9
Manes.10G126700 Manihot esculenta HOM05D004698 ORTHO05D005699 2.8e-30 135.2 82 79.3
Manes.14G015500 Manihot esculenta HOM05D004698 ORTHO05D005699 2.8e-30 135.2 82 79.3
Ah.06g193310 Amaranthus hybridus HOM05D004698 ORTHO05D005699 4.8e-30 134.4 80 81.2
MD11G1019500 Malus domestica HOM05D004698 ORTHO05D005699 4.8e-30 134.4 78 84.6
Potri.003G212400 Populus trichocarpa HOM05D004698 ORTHO05D005699 4.8e-30 134.4 91 72.5
Potri.T056064 Populus trichocarpa HOM05D004698 ORTHO05D005699 4.8e-30 134.4 91 72.5
PGSC0003DMG400032153 Solanum tuberosum HOM05D004698 ORTHO05D005699 4.8e-30 134.4 88 71.6
vmacro07926 Vaccinium macrocarpon HOM05D004698 ORTHO05D005699 4.8e-30 134.4 89 70.8
Sabra03G0158600 Salix brachista HOM05D004698 ORTHO05D005699 6.3e-30 134.0 91 72.5
TWI60G0418 Tripterygium wilfordii HOM05D004698 ORTHO05D005699 6.3e-30 134.0 84 77.4
Duzib168G2110 Durio zibethinus HOM05D004698 ORTHO05D005699 8.2e-30 133.7 84 71.4
Manes.06G169600 Manihot esculenta HOM05D004698 ORTHO05D005699 8.2e-30 133.7 82 78.0
Actinidia40436 Actinidia chinensis HOM05D004698 ORTHO05D005699 1.1e-29 133.3 82 76.8
EL10Ac4g10324 Beta vulgaris HOM05D004698 ORTHO05D005699 1.1e-29 133.3 80 81.2
CANSAT54G0070 Cannabis sativa HOM05D004698 ORTHO05D005699 1.1e-29 133.3 87 71.3
Thecc.09G219100 Theobroma cacao HOM05D004698 ORTHO05D005699 1.1e-29 133.3 84 72.6
Migut.K00041 Erythranthe guttata HOM05D004698 ORTHO05D005699 1.4e-29 132.9 82 76.8
Lj2C370G0 Lonicera japonica HOM05D004698 ORTHO05D005699 1.4e-29 132.9 94 69.1
Solyc01g006480.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 1.4e-29 132.9 88 70.5
Sopen01g002460 Solanum pennellii HOM05D004698 ORTHO05D005699 1.4e-29 132.9 88 70.5
Nitab4.5_0013751g0010 Nicotiana tabacum HOM05D004698 ORTHO05D005699 1.8e-29 132.5 87 73.6
Sabra03G0155400 Salix brachista HOM05D004698 ORTHO05D005699 1.8e-29 132.5 84 75.0
Duzib170G0131 Durio zibethinus HOM05D004698 ORTHO05D005699 2.4e-29 132.1 84 72.6
MBI01_g33892_MAGBIO Magnolia biondii HOM05D004698 ORTHO05D005699 2.4e-29 132.1 84 76.2
Sed0023233 Sechium edule HOM05D004698 ORTHO05D005699 2.4e-29 132.1 88 75.0
Lsat_1_v5_gn_9_26700 Lactuca sativa HOM05D004698 ORTHO05D005699 5.3e-29 131.0 87 69.0
Nitab4.5_0001146g0120 Nicotiana tabacum HOM05D004698 ORTHO05D005699 5.3e-29 131.0 87 73.6
Actinidia22026 Actinidia chinensis HOM05D004698 ORTHO05D005699 6.9e-29 130.6 82 76.8
Hund21659 Selenicereus undatus HOM05D004698 ORTHO05D005699 6.9e-29 130.6 88 71.6
SGA_v2.0_scaffold94G28426 Striga asiatica HOM05D004698 ORTHO05D005699 6.9e-29 130.6 83 73.5
ATR0605G157 Amborella trichopoda HOM05D004698 ORTHO05D005699 1.2e-28 129.8 84 75.0
AUR62000051 Chenopodium quinoa HOM05D004698 ORTHO05D005699 1.5e-28 129.4 83 74.7
ECA247G2042 Erigeron canadensis HOM05D004698 ORTHO05D005699 1.5e-28 129.4 84 72.6
Gorai.013G249300 Gossypium raimondii HOM05D004698 ORTHO05D005699 2.0e-28 129.0 84 69.0
Hund07554 Selenicereus undatus HOM05D004698 ORTHO05D005699 2.0e-28 129.0 83 75.9
Gohir.A05G066748 Gossypium hirsutum HOM05D004698 ORTHO05D005699 2.6e-28 128.6 84 73.8
TAR633G2590 Trochodendron aralioides HOM05D004698 ORTHO05D005699 2.6e-28 128.6 88 70.5
Carub.0006s1798 Capsella rubella HOM05D004698 ORTHO05D005699 3.4e-28 128.3 86 67.4
Peaxi162Scf00403g00114 Petunia axillaris HOM05D004698 ORTHO05D005699 3.4e-28 128.3 87 65.5
MSTRG.26088 Avicennia marina HOM05D004698 ORTHO05D005699 4.5e-28 127.9 82 76.8
CDE10G0673 Ceratophyllum demersum HOM05D004698 ORTHO05D005699 4.5e-28 127.9 87 69.0
Gohir.A13G214800 Gossypium hirsutum HOM05D004698 ORTHO05D005699 4.5e-28 127.9 84 67.9
PGR102G0099 Punica granatum HOM05D004698 ORTHO05D005699 4.5e-28 127.9 86 73.3
Gohir.D05G069500 Gossypium hirsutum HOM05D004698 ORTHO05D005699 5.9e-28 127.5 84 72.6
BcaB01g04838 Brassica carinata HOM05D004698 ORTHO05D005699 7.7e-28 127.1 83 72.3
BolC3t13583H Brassica oleracea HOM05D004698 ORTHO05D005699 7.7e-28 127.1 88 67.0
CAN.G649.13 Capsicum annuum HOM05D004698 ORTHO05D005699 1.3e-27 126.3 81 69.1
AUR62019223 Chenopodium quinoa HOM05D004698 ORTHO05D005699 1.3e-27 126.3 84 72.6
AL6G31140 Arabidopsis lyrata HOM05D004698 ORTHO05D005699 1.7e-27 125.9 88 63.6
Lj5g0001870 Lotus japonicus HOM05D004698 ORTHO05D005699 1.7e-27 125.9 87 70.1
A03p09560 Brassica napus HOM05D004698 ORTHO05D005699 2.2e-27 125.6 83 72.3
C03p11130 Brassica napus HOM05D004698 ORTHO05D005699 2.2e-27 125.6 88 65.9
BraA03t10273Z Brassica rapa HOM05D004698 ORTHO05D005699 2.2e-27 125.6 83 72.3
CARHR193280 Cardamine hirsuta HOM05D004698 ORTHO05D005699 2.9e-27 125.2 83 69.9
Gorai.009G070500 Gossypium raimondii HOM05D004698 ORTHO05D005699 2.9e-27 125.2 84 71.4
AT5G19630 Arabidopsis thaliana HOM05D004698 ORTHO05D005699 3.8e-27 124.8 88 62.5
Thhalv10014585m.g Eutrema salsugineum HOM05D004698 ORTHO05D005699 3.8e-27 124.8 86 67.4
SalBow1G8278 Salvia bowleyana HOM05D004698 ORTHO05D005699 3.8e-27 124.8 82 74.4
SalBow1G8507 Salvia bowleyana HOM05D004698 ORTHO05D005699 3.8e-27 124.8 82 74.4
Aa31LG7G13160 Aethionema arabicum HOM05D004698 ORTHO05D005699 5.0e-27 124.4 86 65.1
arahy.Tifrunner.gnm1.ann1.5V818H Arachis hypogaea HOM05D004698 ORTHO05D005699 5.0e-27 124.4 82 73.2
arahy.Tifrunner.gnm1.ann1.Y8WF3A Arachis hypogaea HOM05D004698 ORTHO05D005699 5.0e-27 124.4 82 73.2
Lju124A28T33 Lonicera japonica HOM05D004698 ORTHO05D005699 5.0e-27 124.4 83 73.5
Manes.08G046200 Manihot esculenta HOM05D004698 ORTHO05D005699 5.0e-27 124.4 87 70.1
Glyma.20G247000 Glycine max HOM05D004698 ORTHO05D005699 8.5e-27 123.6 82 70.7
Eucgr.B03647 Eucalyptus grandis HOM05D004698 ORTHO05D005699 1.1e-26 123.2 85 70.6
Eucgr.L01569 Eucalyptus grandis HOM05D004698 ORTHO05D005699 1.1e-26 123.2 85 70.6
Sp6g24760 Schrenkiella parvula HOM05D004698 ORTHO05D005699 1.1e-26 123.2 83 67.5
MD03G1115900 Malus domestica HOM05D004698 ORTHO05D005699 1.4e-26 122.9 88 71.6
VMungo0720G2032 Vigna mungo HOM05D004698 ORTHO05D005699 1.4e-26 122.9 87 67.8
SEGI_09892 Sequoiadendron giganteum HOM05D004698 ORTHO05D005699 1.9e-26 122.5 84 67.9
DCAR_003213 Daucus carota HOM05D004698 ORTHO05D005699 2.5e-26 122.1 87 67.8
Phvul.007G003200 Phaseolus vulgaris HOM05D004698 ORTHO05D005699 3.2e-26 121.7 87 66.7
THA.LOC104811123 Tarenaya hassleriana HOM05D004698 ORTHO05D005699 3.2e-26 121.7 87 62.1
Lalb_Chr06g0164501 Lupinus albus HOM05D004698 ORTHO05D005699 4.2e-26 121.3 83 68.7
HPP92_022782 Vanilla planifolia HOM05D004698 ORTHO05D005699 4.2e-26 121.3 83 69.9
HanXRQChr10g0300701 Helianthus annuus HOM05D004698 ORTHO05D005699 7.2e-26 120.6 78 75.6
Manes.08G045900 Manihot esculenta HOM05D004698 ORTHO05D005699 7.2e-26 120.6 80 72.5
unitig_0.g767 Utricularia gibba HOM05D004698 ORTHO05D005699 7.2e-26 120.6 82 69.5
Peaxi162Scf00258g00313 Petunia axillaris HOM05D004698 ORTHO05D005699 9.4e-26 120.2 84 67.9
Psat2g056640 Pisum sativum HOM05D004698 ORTHO05D005699 9.4e-26 120.2 88 65.9
Psat6g242840 Pisum sativum HOM05D004698 ORTHO05D005699 9.4e-26 120.2 88 65.9
PGSC0003DMG400033344 Solanum tuberosum HOM05D004698 ORTHO05D005699 9.4e-26 120.2 87 65.5
Lalb_Chr02g0144411 Lupinus albus HOM05D004698 ORTHO05D005699 1.2e-25 119.8 88 67.0
TPR.G32598 Trifolium pratense HOM05D004698 ORTHO05D005699 2.1e-25 119.0 83 66.3
Sopen03g015850 Solanum pennellii HOM05D004698 ORTHO05D005699 3.6e-25 118.2 87 64.4
Solyc03g063290.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 4.6e-25 117.9 87 64.4
Os02g0717100 Oryza sativa ssp. japonica HOM05D004698 ORTHO05D005699 6.1e-25 117.5 83 66.3
Zm00001eb252760 Zea mays HOM05D004698 ORTHO05D005699 6.1e-25 117.5 83 65.1
Medtr8g092560 Medicago truncatula HOM05D004698 ORTHO05D005699 7.9e-25 117.1 84 65.5
AagrBONN_evm.TU.Sc2ySwM_228.4678 Anthoceros agrestis HOM05D004698 ORTHO05D005699 2.3e-24 115.5 83 63.9
CAN.G364.5 Capsicum annuum HOM05D004698 ORTHO05D005699 3.9e-24 114.8 87 63.2
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 3.9e-24 114.8 84 66.7
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 3.9e-24 114.8 84 66.7
BcaC03g13695 Brassica carinata HOM05D004698 ORTHO05D005699 8.8e-24 113.6 86 59.3
Pp3c7_25270 Physcomitrium patens HOM05D004698 ORTHO05D005699 2.5e-23 112.1 83 61.4
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 9.7e-23 110.2 82 68.3
SMO117G0218 Selaginella moellendorffii HOM05D004698 ORTHO05D005699 4.1e-21 104.8 83 57.8
Pp3c25_340 Physcomitrium patens HOM05D004698 ORTHO05D005699 6.9e-21 104.0 82 58.5
SHI30529 Sapria himalayana HOM05D004698 ORTHO05D005699 3.4e-20 101.7 84 66.7
Mapoly0046s0043 Marchantia polymorpha HOM05D004698 ORTHO05D005699 7.7e-20 100.5 88 51.1
BcaB05g23400 Brassica carinata HOM05D004698 ORTHO05D005699 1.3e-19 99.8 86 51.2
RcHm_v2.0_Chr1g0343461 Rosa chinensis HOM05D004698 ORTHO05D005699 5.0e-19 97.8 59 86.4
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 1.9e-18 95.9 71 63.4
Sabra16G0026900 Salix brachista HOM05D004698 ORTHO05D005699 3.3e-15 85.1 84 53.6
MD03G1017500 Malus domestica HOM05D004698 ORTHO05D005699 6.3e-14 80.9 46 87.0
Glyma.18G020100 Glycine max HOM05D004698 ORTHO05D005699 1.6e-12 76.3 86 50.0
GSVIVG01025354001 Vitis vinifera HOM05D004698 ORTHO05D005699 4.5e-12 74.7 45 77.8
Dinv15836 Davidia involucrata HOM05D004698 ORTHO05D005699 1.7e-11 72.8 48 72.9
Cc06_g16050 Coffea canephora HOM05D004698 ORTHO05D005699 3.8e-11 71.6 45 71.1
BolC2t06975H Brassica oleracea HOM05D004698 ORTHO05D005699 3.6e-09 65.1 48 58.3
MD13G1112600 Malus domestica HOM05D000829 ORTHO05D000690 8.0e-09 63.9 41 75.6
BNapus_Darmor_BZH_scaffold_38p02250 Brassica napus HOM05D004698 ORTHO05D005699 1.8e-08 62.8 44 61.4
Potri.006G191700 Populus trichocarpa HOM05D004698 ORTHO05D005699 5.2e-08 61.2 44 65.9
Cc01_g03800 Coffea canephora HOM05D004698 ORTHO05D005699 2.0e-07 59.3 38 68.4
PRCOL_00006777 Prasinoderma coloniale HOM05D004698 ORTHO05D005699 2.0e-07 59.3 87 37.9


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