Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0079721 Rosa chinensis HOM05D046827 ORTHO05D007107 5.1e-34 147.1 72 100.0
RcHm_v2.0_Chr6g0258861 Rosa chinensis HOM05D046827 ORTHO05D007107 1.3e-32 142.5 71 97.2
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 2.8e-08 61.6 40 82.5
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 8.2e-08 60.1 40 80.0
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 4.1e-07 57.8 39 79.5
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.1e-07 57.8 39 79.5
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.1e-07 57.8 39 79.5
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.1e-07 57.8 39 79.5
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.1e-07 57.8 39 79.5
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 5.3e-07 57.4 40 75.0
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 6.9e-07 57.0 40 75.0
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 1.2e-06 56.2 43 67.4
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 1.5e-06 55.8 40 70.0
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 2.6e-06 55.1 40 70.0
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 2.6e-06 55.1 39 71.8
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 2.6e-06 55.1 39 71.8
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 2.6e-06 55.1 39 71.8
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 3.4e-06 54.7 40 72.5
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 5.9e-06 53.9 40 67.5
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 7.7e-06 53.5 39 66.7


User provided reference genes

Program Settings