Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0079631 Rosa chinensis HOM05D008813 ORTHO05D010456 2.8e-129 465.3 236 100.0
RcHm_v2.0_Chr1g0352511 Rosa chinensis HOM05D000017 ORTHO05D000013 2.3e-128 462.2 235 99.1
FvH4_6g32521 Fragaria vesca HOM05D008813 ORTHO05D010456 2.9e-62 242.7 209 63.2
FAN03G2854 Fragaria x ananassa HOM05D008813 ORTHO05D010456 4.1e-56 222.2 235 51.9
FAN19G2017 Fragaria x ananassa HOM05D008813 ORTHO05D010456 1.2e-55 220.7 264 47.0
FAN21G2578 Fragaria x ananassa HOM05D008813 ORTHO05D010456 1.5e-53 213.8 235 51.1
FvH4_1g10353 Fragaria vesca HOM05D008813 ORTHO05D010456 2.5e-53 213.0 237 48.9
FvH4_6g39832 Fragaria vesca HOM05D008813 ORTHO05D010456 1.4e-51 207.2 241 51.5
FvH4_4g05150 Fragaria vesca HOM05D008813 ORTHO05D010456 1.6e-47 193.7 230 49.1
FAN24G0435 Fragaria x ananassa HOM05D008813 ORTHO05D010456 8.5e-46 188.0 239 44.8
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 2.3e-43 179.9 207 48.3
FAN16G3596 Fragaria x ananassa HOM05D008813 ORTHO05D010456 8.8e-43 177.9 236 42.4
FvH4_2g11356 Fragaria vesca HOM05D008248 ORTHO05D010456 7.0e-40 168.3 229 42.4
FvH4_2g00550 Fragaria vesca HOM05D000005 ORTHO05D000012 2.7e-39 166.4 151 56.3
FAN16G1353 Fragaria x ananassa HOM05D008248 ORTHO05D010456 3.5e-39 166.0 229 41.9
FAN02G0012 Fragaria x ananassa HOM05D008813 ORTHO05D010456 4.5e-39 165.6 173 49.1
FvH4_1g09981 Fragaria vesca HOM05D000017 ORTHO05D010456 7.7e-39 164.9 229 41.9
FAN26G1971 Fragaria x ananassa HOM05D008813 ORTHO05D003284 1.7e-38 163.7 125 63.2
FAN02G4042 Fragaria x ananassa HOM05D008248 ORTHO05D010456 2.9e-38 162.9 229 41.5
FAN20G1641 Fragaria x ananassa HOM05D008813 ORTHO05D010456 6.6e-38 161.8 177 45.8
FAN03G0843 Fragaria x ananassa HOM05D008813 ORTHO05D010456 1.9e-37 160.2 167 49.7
FAN21G1652 Fragaria x ananassa HOM05D008813 ORTHO05D010456 5.6e-37 158.7 217 45.2
FAN14G2120 Fragaria x ananassa HOM05D008248 ORTHO05D010456 3.6e-36 156.0 228 39.9
FAN28G0424 Fragaria x ananassa HOM05D008248 ORTHO05D010456 8.0e-36 154.8 237 40.5
FvH4_4g08121 Fragaria vesca HOM05D008813 ORTHO05D010456 5.2e-35 152.1 134 55.2
FvH4_1g29251 Fragaria vesca HOM05D008248 ORTHO05D010456 1.3e-33 147.5 225 39.6
FvH4_2g04622 Fragaria vesca HOM05D008248 ORTHO05D010456 2.2e-33 146.7 227 39.6
FvH4_1g02993 Fragaria vesca HOM05D008813 ORTHO05D010456 9.2e-32 141.4 236 41.1
FvH4_6g31091 Fragaria vesca HOM05D008248 ORTHO05D029481 2.0e-31 140.2 211 39.3
FvH4_3g31622 Fragaria vesca HOM05D008248 ORTHO05D010456 5.9e-31 138.7 227 37.4
FAN03G2697 Fragaria x ananassa HOM05D008248 ORTHO05D010456 4.7e-28 129.0 111 52.3
FAN05G4323 Fragaria x ananassa HOM05D008248 ORTHO05D010456 6.2e-28 128.6 199 39.2
FAN14G1231 Fragaria x ananassa HOM05D008248 ORTHO05D010456 5.2e-27 125.6 232 36.2
FAN16G2968 Fragaria x ananassa HOM05D008813 ORTHO05D010456 3.4e-26 122.9 146 50.7
FAN09G4441 Fragaria x ananassa HOM05D008813 ORTHO05D010456 4.4e-26 122.5 190 37.9
RcHm_v2.0_Chr6g0266931 Rosa chinensis HOM05D000017 ORTHO05D000013 2.9e-25 119.8 176 39.2
FvH4_6g43711 Fragaria vesca HOM05D008248 ORTHO05D010456 3.2e-24 116.3 229 35.8
FAN21G1303 Fragaria x ananassa HOM05D008248 ORTHO05D010456 1.6e-23 114.0 210 34.3
FAN19G1555 Fragaria x ananassa HOM05D008813 ORTHO05D010456 1.0e-22 111.3 178 39.3
FvH4_6g09062 Fragaria vesca HOM05D008813 ORTHO05D010456 8.6e-22 108.2 190 35.8
FAN13G2510 Fragaria x ananassa HOM05D008248 ORTHO05D010456 6.8e-19 98.6 98 46.9
FAN17G1423 Fragaria x ananassa HOM05D008813 ORTHO05D010456 2.9e-17 93.2 178 37.6
FAN16G1733 Fragaria x ananassa HOM05D008813 ORTHO05D010456 3.7e-17 92.8 149 36.2
FAN28G2685 Fragaria x ananassa HOM05D008248 ORTHO05D010456 4.6e-15 85.9 176 35.8
FAN10G2484 Fragaria x ananassa HOM05D008248 ORTHO05D046273 1.7e-14 84.0 176 35.2
FAN19G0254 Fragaria x ananassa HOM05D047127 ORTHO05D004107 5.1e-14 82.4 146 36.3
FAN25G3563 Fragaria x ananassa HOM05D008248 ORTHO05D010456 1.5e-13 80.9 70 55.7
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 1.2e-12 77.8 121 38.0
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 1.2e-12 77.8 142 31.7
FvH4_6g18391 Fragaria vesca HOM05D008248 ORTHO05D010456 3.6e-12 76.3 168 33.9
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 4.7e-12 75.9 120 30.8
FvH4_1g21221 Fragaria vesca HOM05D008813 ORTHO05D010456 6.2e-12 75.5 117 40.2
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 4.0e-11 72.8 120 30.0
FAN16G0852 Fragaria x ananassa HOM05D008248 ORTHO05D010456 4.0e-11 72.8 45 68.9
FvH4_1g28550 Fragaria vesca HOM05D008248 ORTHO05D046273 5.2e-11 72.4 168 32.7
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 2.0e-10 70.5 102 33.3
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 3.4e-10 69.7 102 33.3
FvH4_1g29131 Fragaria vesca HOM05D008813 ORTHO05D010456 1.3e-09 67.8 103 41.7
FvH4_5g20181 Fragaria vesca HOM05D000017 ORTHO05D009451 8.4e-09 65.1 110 33.6
FAN18G3463 Fragaria x ananassa HOM05D008248 ORTHO05D046529 8.4e-09 65.1 210 28.1
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-08 64.7 146 29.5
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-08 64.7 146 29.5
FAN23G2780 Fragaria x ananassa HOM05D008248 ORTHO05D010456 1.4e-08 64.3 94 37.2
DCAR_025699 Daucus carota HOM05D040820 ORTHO05D004107 1.9e-08 63.9 92 40.2
FAN09G2706 Fragaria x ananassa HOM05D008248 ORTHO05D010456 3.2e-08 63.2 58 44.8
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.1e-08 62.8 114 31.6
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.1e-08 62.8 136 33.8
FAN11G3226 Fragaria x ananassa HOM05D009570 ORTHO05D009451 1.2e-07 61.2 110 31.8
Prupe.3G123400 Prunus persica HOM05D000017 ORTHO05D000013 1.2e-07 61.2 147 25.9
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-07 60.8 114 28.9
FAN17G2186 Fragaria x ananassa HOM05D027620 ORTHO05D029384 2.1e-07 60.5 93 33.3
DCAR_031246 Daucus carota HOM05D023779 ORTHO05D004107 2.7e-07 60.1 109 36.7
DCAR_012597 Daucus carota HOM05D023779 ORTHO05D004107 7.8e-07 58.5 107 32.7
vmacro00428 Vaccinium macrocarpon HOM05D008248 ORTHO05D010456 1.0e-06 58.2 91 34.1
Dinv11566 Davidia involucrata HOM05D008850 ORTHO05D004107 1.3e-06 57.8 98 32.7
DCAR_017137 Daucus carota HOM05D037401 ORTHO05D004107 2.3e-06 57.0 108 33.3
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-06 57.0 109 32.1
Hma1.2p1_1076F.1_g254590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.0e-06 56.6 101 32.7
Rhsim13G0199100 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.9e-06 56.2 106 37.7
vmacro07968 Vaccinium macrocarpon HOM05D008850 ORTHO05D004107 5.1e-06 55.8 122 30.3


User provided reference genes

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