Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0077541 Rosa chinensis HOM05D009519 ORTHO05D000090 2.8e-26 124.0 57 100.0
RcHm_v2.0_Chr5g0072831 Rosa chinensis HOM05D000162 ORTHO05D010307 2.4e-09 67.8 36 80.6
FvH4_4g22280 Fragaria vesca HOM05D000162 ORTHO05D000090 3.1e-09 67.4 40 72.5
FAN02G2649 Fragaria x ananassa HOM05D000162 ORTHO05D000090 3.1e-09 67.4 40 72.5
FAN21G2460 Fragaria x ananassa HOM05D009519 ORTHO05D000090 3.1e-09 67.4 40 70.0
FAN07G1899 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.0e-09 66.2 53 60.4
FAN25G0292 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.2e-08 65.5 40 70.0
RcHm_v2.0_Chr5g0077511 Rosa chinensis HOM05D000162 ORTHO05D010307 1.2e-08 65.5 36 80.6
RcHm_v2.0_Chr5g0074231 Rosa chinensis HOM05D009519 ORTHO05D010307 2.0e-08 64.7 38 73.7
FAN11G2459 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.5e-08 63.5 40 67.5
FvH4_3g39650 Fragaria vesca HOM05D000162 ORTHO05D003288 5.9e-08 63.2 40 70.0
FAN11G0438 Fragaria x ananassa HOM05D000027 ORTHO05D001163 5.9e-08 63.2 40 70.0
FAN16G1933 Fragaria x ananassa HOM05D000027 ORTHO05D001163 5.9e-08 63.2 40 70.0
RcHm_v2.0_Chr5g0071481 Rosa chinensis HOM05D000162 ORTHO05D000090 5.9e-08 63.2 38 73.7
FAN05G1965 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.7e-08 62.8 40 67.5
MD11G1117400 Malus domestica HOM05D000162 ORTHO05D010307 1.3e-07 62.0 38 68.4
FvH4_3g42430 Fragaria vesca HOM05D000162 ORTHO05D000090 1.7e-07 61.6 40 70.0
FAN05G5528 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.2e-07 61.2 40 65.0
FvH4_4g22270 Fragaria vesca HOM05D000162 ORTHO05D000090 3.8e-07 60.5 40 67.5
FvH4_3g39940 Fragaria vesca HOM05D000162 ORTHO05D000090 5.0e-07 60.1 37 70.3
FAN25G0683 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.0e-07 60.1 37 70.3
Prupe.6G087400 Prunus persica HOM05D000162 ORTHO05D010307 5.0e-07 60.1 38 63.2
FAN25G3795 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.5e-07 59.7 40 62.5
FvH4_3g37480 Fragaria vesca HOM05D000162 ORTHO05D000090 8.5e-07 59.3 40 62.5
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 1.1e-06 58.9 35 74.3
RcHm_v2.0_Chr5g0077521 Rosa chinensis HOM05D000162 ORTHO05D000090 1.1e-06 58.9 33 78.8
FAN05G3453 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.5e-06 58.5 40 62.5
Prupe.6G080500 Prunus persica HOM05D000162 ORTHO05D000090 1.5e-06 58.5 37 64.9
Prupe.8G078200 Prunus persica HOM05D000162 ORTHO05D000090 1.5e-06 58.5 38 60.5
FvH4_3g39890 Fragaria vesca HOM05D000162 ORTHO05D000090 1.9e-06 58.2 37 67.6
FAN21G3095 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.9e-06 58.2 37 67.6
FAN21G3177 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.9e-06 58.2 37 67.6
Prupe.3G114600 Prunus persica HOM05D009519 ORTHO05D010307 1.9e-06 58.2 38 60.5
FAN16G0919 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.5e-06 57.8 37 64.9
FvH4_3g40130 Fragaria vesca HOM05D000162 ORTHO05D000090 4.2e-06 57.0 37 64.9
FAN11G3989 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.2e-06 57.0 37 67.6
FAN16G1190 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.2e-06 56.2 40 62.5
FAN16G2089 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.4e-06 55.8 40 60.0
MD11G1115600 Malus domestica HOM05D000162 ORTHO05D000090 9.4e-06 55.8 45 55.6
RcHm_v2.0_Chr5g0065171 Rosa chinensis HOM05D014620 ORTHO05D016319 9.4e-06 55.8 32 75.0


User provided reference genes

Program Settings