Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.5e-83 312.8 155 100.0
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 6.8e-68 260.8 155 85.8
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.0e-63 246.9 155 81.3
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.4e-50 200.7 138 73.2
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.4e-50 200.7 138 73.2
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 1.2e-48 196.8 145 68.3
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 5.6e-46 188.0 138 68.1
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.0e-44 180.6 139 66.9
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.8e-42 175.3 154 59.7
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.4e-41 173.3 155 60.6
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.4e-41 172.6 155 62.6
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.2e-41 171.8 129 68.2
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.3e-41 170.6 138 65.2
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.1e-40 169.5 129 67.4
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.1e-40 169.5 129 67.4
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.0e-39 165.6 130 66.9
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.6e-38 161.4 129 66.7
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.8e-36 156.4 129 63.6
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.8e-35 151.4 129 61.2
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 7.6e-35 151.0 144 59.0
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-34 150.2 156 54.5
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-34 148.7 147 54.4
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.4e-34 147.9 129 61.2
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.4e-34 147.9 129 61.2
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-33 146.7 156 53.8
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 4.6e-32 141.7 137 54.7
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.3e-31 140.2 165 52.1
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.3e-31 140.2 156 51.3
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-31 139.8 110 65.5
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-30 137.1 122 58.2
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 9.6e-30 134.0 127 54.3
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.4e-28 130.2 127 53.5
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.4e-28 130.2 127 53.5
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.8e-28 129.8 124 54.8
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 7.6e-27 124.4 136 51.5
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 2.2e-26 122.9 127 49.6
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.9e-26 121.7 154 42.9
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 1.1e-25 120.6 127 48.0
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 2.5e-25 119.4 127 48.8
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 4.2e-25 118.6 155 44.5
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.1e-25 117.9 154 44.2
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 9.3e-25 117.5 127 47.2
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 9.3e-25 117.5 129 48.1
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-24 116.7 129 48.8
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.1e-24 116.3 124 54.8
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-24 116.3 154 43.5
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 4.6e-24 115.2 129 48.1
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 5.1e-23 111.7 127 49.6
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 5.1e-23 111.7 127 49.6
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 5.1e-23 111.7 127 49.6
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 5.1e-23 111.7 127 49.6
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 5.1e-23 111.7 127 49.6
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-23 111.7 125 48.8
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.7e-23 111.3 125 48.8
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 8.7e-23 110.9 125 48.0
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.1e-22 110.5 155 43.9
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-22 110.5 125 46.4
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-22 110.2 125 48.8
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-22 110.2 125 47.2
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 7.4e-22 107.8 127 48.8
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.4e-22 107.8 124 45.2
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 9.6e-22 107.5 127 45.7
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.8e-21 105.9 141 41.1
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 4.8e-21 105.1 128 45.3
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 4.8e-21 105.1 125 44.8
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.2e-21 104.8 125 46.4
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.2e-21 104.8 125 46.4
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.2e-21 104.8 125 46.4
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-20 104.0 133 41.4
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.1e-20 102.4 135 43.0
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 9.0e-20 100.9 125 45.6
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 9.0e-20 100.9 125 45.6
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-19 99.4 128 41.4
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.4e-19 99.0 125 44.0
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.5e-19 98.6 137 43.1
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 7.6e-19 97.8 121 43.8
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.3e-18 97.1 127 47.2
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 2.2e-18 96.3 128 46.1
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.9e-18 95.9 127 46.5
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-18 95.9 115 45.2
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 6.5e-18 94.7 125 47.2
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 8.4e-18 94.4 127 44.9
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 8.4e-18 94.4 114 48.2
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 7.1e-17 91.3 127 39.4
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-16 90.1 158 42.4
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.1e-16 88.2 131 42.0
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.3e-15 87.0 144 35.4
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.3e-15 87.0 135 43.0
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.9e-15 85.5 127 39.4
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 1.1e-14 84.0 110 46.4
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-14 83.6 107 43.9
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 2.5e-14 82.8 158 38.6
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 7.4e-14 81.3 125 41.6
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.2e-13 77.8 113 38.1
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.4e-12 77.0 134 39.6
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.8e-12 76.6 62 64.5
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 1.8e-12 76.6 66 56.1
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 3.1e-12 75.9 96 42.7
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.1e-12 75.5 65 60.0
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 6.9e-12 74.7 125 40.0
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 9.0e-12 74.3 124 39.5
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 1.0e-10 70.9 100 44.0
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 2.9e-10 69.3 46 71.7
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.9e-09 66.6 123 33.3
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 3.2e-09 65.9 81 48.1
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-09 65.9 100 42.0
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.2e-09 65.5 137 33.6
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 5.5e-09 65.1 73 46.6
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.6e-08 63.5 108 38.0
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.7e-08 62.8 100 43.0
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-08 62.4 123 34.1
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-07 60.5 123 30.9
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-07 60.5 132 34.8
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 3.0e-07 59.3 57 47.4
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 5.1e-07 58.5 126 31.7
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.5e-06 56.2 97 35.1
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 3.3e-06 55.8 95 40.0
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 5.7e-06 55.1 113 31.9


User provided reference genes

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