Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0076361 Rosa chinensis HOM05D000759 ORTHO05D000574 9.7e-14 79.0 41 100.0
RcHm_v2.0_Chr5g0058981 Rosa chinensis HOM05D000759 ORTHO05D000574 1.8e-12 74.7 41 95.1
RcHm_v2.0_Chr7g0213641 Rosa chinensis HOM05D000759 ORTHO05D000574 4.7e-08 60.1 36 86.1
FvH4_5g24110 Fragaria vesca HOM05D000759 ORTHO05D000574 6.1e-08 59.7 36 86.1
FAN13G0726 Fragaria x ananassa HOM05D000759 ORTHO05D000574 6.1e-08 59.7 36 86.1
FAN04G0302 Fragaria x ananassa HOM05D000759 ORTHO05D000574 1.8e-07 58.2 36 83.3
FAN13G1470 Fragaria x ananassa HOM05D000759 ORTHO05D000574 1.8e-07 58.2 36 83.3
FAN13G2278 Fragaria x ananassa HOM05D000759 ORTHO05D000574 1.8e-07 58.2 36 83.3
Rhsim11G0034400 Rhododendron simsii HOM05D000759 ORTHO05D000574 5.2e-07 56.6 36 75.0
SGA_v2.0_scaffold111G31358 Striga asiatica HOM05D000759 ORTHO05D000574 5.2e-07 56.6 36 77.8
Migut.E01356 Erythranthe guttata HOM05D000759 ORTHO05D000574 6.7e-07 56.2 36 77.8
vmacro00051 Vaccinium macrocarpon HOM05D000759 ORTHO05D000574 6.7e-07 56.2 36 75.0
vmacro00074 Vaccinium macrocarpon HOM05D000759 ORTHO05D000574 6.7e-07 56.2 36 75.0
Glyma.04G123600 Glycine max HOM05D000759 ORTHO05D000574 8.8e-07 55.8 36 77.8
Glyma.09G215100 Glycine max HOM05D000759 ORTHO05D000574 8.8e-07 55.8 36 77.8
Lj8C331G14 Lonicera japonica HOM05D000759 ORTHO05D000574 1.1e-06 55.5 36 75.0
Hund11095 Selenicereus undatus HOM05D000759 ORTHO05D000574 1.1e-06 55.5 36 77.8
SMO364G0131 Selaginella moellendorffii HOM05D000759 ORTHO05D000574 1.5e-06 55.1 36 72.2
SMO367G1153 Selaginella moellendorffii HOM05D000759 ORTHO05D000574 1.5e-06 55.1 36 72.2
SMO367G1272 Selaginella moellendorffii HOM05D000759 ORTHO05D000574 1.5e-06 55.1 36 72.2
Lsat_1_v5_gn_3_23420 Lactuca sativa HOM05D000759 ORTHO05D000574 2.0e-06 54.7 36 72.2
QL10p059078 Quercus lobata HOM05D000759 ORTHO05D000574 2.0e-06 54.7 36 77.8
Ah.07g201400 Amaranthus hybridus HOM05D000759 ORTHO05D000574 2.6e-06 54.3 36 72.2
arahy.Tifrunner.gnm1.ann1.NV0QLC Arachis hypogaea HOM05D000759 ORTHO05D000574 2.6e-06 54.3 36 75.0
arahy.Tifrunner.gnm1.ann1.VMB8PU Arachis hypogaea HOM05D000759 ORTHO05D000574 2.6e-06 54.3 36 75.0
CiPaw.01G199300 Carya illinoinensis HOM05D000759 ORTHO05D000574 2.6e-06 54.3 36 75.0
Hma1.2p1_1873F.1_g306210 Hydrangea macrophylla HOM05D000759 ORTHO05D000574 2.6e-06 54.3 36 72.2
MD06G1017200 Malus domestica HOM05D000759 ORTHO05D000574 2.6e-06 54.3 36 75.0
Phvul.002G127300 Phaseolus vulgaris HOM05D000759 ORTHO05D000574 2.6e-06 54.3 36 75.0
Prupe.5G019200 Prunus persica HOM05D000759 ORTHO05D000574 2.6e-06 54.3 36 75.0
QL02p019130 Quercus lobata HOM05D000759 ORTHO05D000574 2.6e-06 54.3 30 90.0
CSS0008609 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 3.3e-06 53.9 36 72.2
SalBow8G1874 Salvia bowleyana HOM05D000319 ORTHO05D000574 3.3e-06 53.9 33 78.8
SMO275G0026 Selaginella moellendorffii HOM05D000759 ORTHO05D000574 3.3e-06 53.9 36 72.2
SMO367G0718 Selaginella moellendorffii HOM05D000759 ORTHO05D000574 3.3e-06 53.9 36 72.2
EL10Ac5g11910 Beta vulgaris HOM05D000759 ORTHO05D000574 4.4e-06 53.5 36 75.0
Eucgr.D02585 Eucalyptus grandis HOM05D000759 ORTHO05D000574 4.4e-06 53.5 36 72.2
HanXRQChr10g0288621 Helianthus annuus HOM05D000759 ORTHO05D000574 4.4e-06 53.5 36 72.2
Peaxi162Scf00193g00215 Petunia axillaris HOM05D000759 ORTHO05D000574 4.4e-06 53.5 36 72.2
CsaV3_3G030300 Cucumis sativus L. HOM05D000759 ORTHO05D000574 5.7e-06 53.1 36 75.0
ECA246G1447 Erigeron canadensis HOM05D000759 ORTHO05D000574 5.7e-06 53.1 36 69.4
Psat2g142600 Pisum sativum HOM05D000759 ORTHO05D000574 5.7e-06 53.1 36 75.0
Aqoxy1G00214 Aquilegia oxysepala HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
CAN.G800.9 Capsicum annuum HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
AUR62007418 Chenopodium quinoa HOM05D000759 ORTHO05D000574 7.5e-06 52.8 30 83.3
AUR62027314 Chenopodium quinoa HOM05D000759 ORTHO05D000574 7.5e-06 52.8 30 83.3
ClCG07G002400 Citrullus lanatus HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
Ciclev10000052m.g Citrus clementina HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
Medtr5g026645 Medicago truncatula HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 75.0
Nn4g24983 Nelumbo nucifera HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
Nitab4.5_0000898g0080 Nicotiana tabacum HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
Nitab4.5_0001023g0040 Nicotiana tabacum HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
Sed0017654 Sechium edule HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
Solyc08g075650.3 Solanum lycopersicum HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
Sopen08g024320 Solanum pennellii HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
PGSC0003DMG402030866 Solanum tuberosum HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
TAR622G1113 Trochodendron aralioides HOM05D000759 ORTHO05D000574 7.5e-06 52.8 36 72.2
HanXRQChr06g0173451 Helianthus annuus HOM05D000759 ORTHO05D000574 9.7e-06 52.4 30 83.3
Rhsim10G0207100 Rhododendron simsii HOM05D000759 ORTHO05D000574 9.7e-06 52.4 30 83.3
HPP92_007400 Vanilla planifolia HOM05D000759 ORTHO05D000574 9.7e-06 52.4 36 72.2


User provided reference genes

Program Settings