Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 2.8e-64 248.4 122 100.0
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.7e-32 141.4 103 67.0
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.8e-31 137.5 99 65.7
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.5e-30 136.3 94 70.2
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.7e-29 132.9 103 64.1
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.7e-29 132.9 98 66.3
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.4e-29 131.0 99 63.6
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-28 129.8 108 61.1
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.9e-28 129.4 99 64.6
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.9e-28 129.4 99 64.6
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 9.3e-28 127.1 108 60.2
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 9.3e-28 127.1 108 60.2
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.3e-28 127.1 98 63.3
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-27 126.7 103 62.1
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.7e-27 125.6 103 60.2
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.8e-27 124.0 102 62.7
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 7.8e-27 124.0 102 60.8
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 8.7e-26 120.6 102 60.8
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-25 120.2 102 60.8
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-25 119.8 102 60.8
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.3e-23 111.3 86 60.5
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-22 110.2 86 61.6
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-20 103.6 107 51.4
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 5.4e-20 101.3 102 52.0
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 9.3e-20 100.5 102 52.0
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 9.3e-20 100.5 102 52.0
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 9.3e-20 100.5 107 49.5
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-19 100.1 112 48.2
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-19 99.0 113 43.4
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.7e-18 96.3 102 48.0
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 3.0e-18 95.5 102 48.0
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 3.9e-18 95.1 100 52.0
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 5.1e-18 94.7 102 49.0
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-17 92.4 102 45.1
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-17 92.0 113 38.9
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-17 92.0 113 38.9
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-17 92.0 113 38.9
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 4.3e-17 91.7 102 47.1
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 9.6e-17 90.5 94 57.4
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-16 90.1 113 38.1
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-16 90.1 102 47.1
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 1.3e-16 90.1 102 47.1
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-16 89.7 102 46.1
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 2.8e-16 89.0 102 47.1
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 4.8e-16 88.2 113 40.7
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 4.8e-16 88.2 103 49.5
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 4.8e-16 88.2 103 49.5
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 8.1e-16 87.4 114 40.4
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 8.1e-16 87.4 102 47.1
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 8.1e-16 87.4 102 46.1
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-15 87.0 102 45.1
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.4e-15 86.7 113 38.9
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-15 86.3 102 47.1
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-15 86.3 102 45.1
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.8e-15 86.3 99 45.5
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-15 85.9 102 45.1
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-15 85.9 102 44.1
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 2.4e-15 85.9 101 45.5
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 2.4e-15 85.9 101 45.5
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.1e-15 85.5 113 41.6
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.1e-15 85.5 113 41.6
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 6.9e-15 84.3 104 41.3
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.9e-15 84.3 102 42.2
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.2e-14 83.6 102 45.1
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-14 82.8 102 44.1
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-14 82.8 102 42.2
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-14 82.0 102 42.2
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-14 81.6 93 46.2
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.5e-14 81.6 101 48.5
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-13 80.1 88 42.0
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-13 80.1 88 42.0
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.3e-13 80.1 93 47.3
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-13 79.3 102 41.2
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 2.2e-13 79.3 93 46.2
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 2.2e-13 79.3 60 65.0
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 2.9e-13 79.0 102 40.2
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 6.4e-13 77.8 110 43.6
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.4e-13 77.4 132 37.1
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.4e-13 77.4 132 37.1
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 8.4e-13 77.4 95 41.1
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.4e-12 75.9 102 44.1
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-12 75.1 97 45.4
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.1e-12 74.3 102 41.2
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 2.1e-11 72.8 104 43.3
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 6.0e-11 71.2 104 43.3
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 6.0e-11 71.2 79 48.1
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 7.9e-11 70.9 41 80.5
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 1.0e-10 70.5 87 40.2
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.0e-10 70.5 46 71.7
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 1.0e-10 70.5 119 37.8
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.0e-10 68.9 89 43.8
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.9e-10 68.6 86 45.3
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-10 68.2 102 39.2
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 8.7e-10 67.4 104 43.3
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.3e-09 65.5 86 43.0
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 7.4e-09 64.3 92 42.4
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-08 63.5 86 41.9
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 1.3e-08 63.5 43 62.8
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-08 62.0 89 40.4
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 8.1e-08 60.8 110 36.4
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 1.1e-07 60.5 83 45.8
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-07 60.5 92 38.0
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 1.4e-07 60.1 102 39.2
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-07 60.1 84 44.0
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-07 58.9 92 38.0
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 6.9e-07 57.8 121 31.4
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.9e-07 57.8 86 41.9
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 1.2e-06 57.0 76 42.1
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-06 56.6 97 40.2
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 2.6e-06 55.8 58 44.8
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-06 55.5 97 40.2
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.4e-06 55.5 89 39.3
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 7.6e-06 54.3 90 31.1
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 7.6e-06 54.3 92 40.2


User provided reference genes

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