Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0073891 Rosa chinensis HOM05D038788 ORTHO05D017814 1.1e-170 603.2 305 100.0
FAN21G1617 Fragaria x ananassa HOM05D001078 ORTHO05D017814 1.6e-68 263.8 288 53.8
FvH4_3g41110 Fragaria vesca HOM05D001078 ORTHO05D017814 2.3e-67 260.0 302 53.0
FAN11G3507 Fragaria x ananassa HOM05D001078 ORTHO05D017814 3.0e-67 259.6 302 53.0
FAN25G3400 Fragaria x ananassa HOM05D001078 ORTHO05D017814 1.9e-66 256.9 287 53.7
FAN16G1957 Fragaria x ananassa HOM05D001078 ORTHO05D017814 9.6e-66 254.6 302 52.3
MD03G1047400 Malus domestica HOM05D038788 ORTHO05D017814 5.5e-21 105.9 256 35.5
Cfa011858 Carpinus fangiana HOM05D001078 ORTHO05D000927 2.1e-12 77.4 113 44.2
MD11G1049900 Malus domestica HOM05D038788 ORTHO05D017814 1.2e-10 71.6 248 30.6
Thecc.04G146600 Theobroma cacao HOM05D001078 ORTHO05D000927 7.5e-10 68.9 107 38.3
TAR623G1781 Trochodendron aralioides HOM05D001078 ORTHO05D000927 9.8e-10 68.6 86 45.3
TAR633G1652 Trochodendron aralioides HOM05D001078 ORTHO05D000927 1.3e-09 68.2 88 42.0
Rhsim05G0233900 Rhododendron simsii HOM05D001078 ORTHO05D000927 1.7e-09 67.8 75 48.0
CSS0004498 Camellia sinensis var. sinensis HOM05D001078 ORTHO05D000927 2.2e-09 67.4 104 40.4
Ciclev10013346m.g Citrus clementina HOM05D001078 ORTHO05D000927 4.8e-09 66.2 96 40.6
Glyma.16G221600 Glycine max HOM05D001078 ORTHO05D000927 8.3e-09 65.5 90 47.8
QL01p023694 Quercus lobata HOM05D001078 ORTHO05D000927 1.4e-08 64.7 119 37.0
Dinv12294 Davidia involucrata HOM05D001078 ORTHO05D000927 1.8e-08 64.3 120 35.8
Manes.08G167600 Manihot esculenta HOM05D001078 ORTHO05D000927 2.4e-08 63.9 71 45.1
QL07p031378 Quercus lobata HOM05D001078 ORTHO05D000927 3.1e-08 63.5 106 38.7
Cpa.g.sc0.55 Carica papaya HOM05D001078 ORTHO05D000927 4.1e-08 63.2 79 41.8
Cfa016996 Carpinus fangiana HOM05D001478 ORTHO05D002240 4.1e-08 63.2 80 42.5
Phvul.010G059800 Phaseolus vulgaris HOM05D001078 ORTHO05D000927 4.1e-08 63.2 89 38.2
MBI15_g31021_MAGBIO Magnolia biondii HOM05D001078 ORTHO05D000927 5.4e-08 62.8 118 37.3
TPR.G30728 Trifolium pratense HOM05D001078 ORTHO05D000927 7.0e-08 62.4 74 43.2
Dinv16935 Davidia involucrata HOM05D001078 ORTHO05D000927 9.1e-08 62.0 104 36.5
MD04G1178300 Malus domestica HOM05D001078 ORTHO05D000927 9.1e-08 62.0 108 38.0
Dinv28759 Davidia involucrata HOM05D001078 ORTHO05D000927 1.2e-07 61.6 125 36.0
Haze_21209 Corylus avellana HOM05D001078 ORTHO05D000927 1.6e-07 61.2 80 42.5
Duzib151G0405 Durio zibethinus HOM05D001078 ORTHO05D000927 1.6e-07 61.2 187 28.3
Potri.019G132601 Populus trichocarpa HOM05D001078 ORTHO05D000927 3.5e-07 60.1 105 36.2
Lj3g0000933 Lotus japonicus HOM05D001078 ORTHO05D000927 4.5e-07 59.7 66 54.5
Atru.chr8.58 Acer truncatum HOM05D001078 ORTHO05D000927 5.9e-07 59.3 117 35.0
FAN02G1981 Fragaria x ananassa HOM05D001078 ORTHO05D000927 1.0e-06 58.5 146 34.2
COL.COLO4_06159 Corchorus olitorius HOM05D001078 ORTHO05D000927 1.7e-06 57.8 164 31.1
FAN09G3692 Fragaria x ananassa HOM05D001078 ORTHO05D000927 1.7e-06 57.8 146 33.6
TWI53G1322 Tripterygium wilfordii HOM05D001078 ORTHO05D000927 1.7e-06 57.8 83 41.0
Sabra06G0087300 Salix brachista HOM05D001078 ORTHO05D000927 2.3e-06 57.4 104 32.7
Actinidia11638 Actinidia chinensis HOM05D001078 ORTHO05D000927 2.9e-06 57.0 121 35.5
Actinidia11478 Actinidia chinensis HOM05D001078 ORTHO05D000927 3.8e-06 56.6 97 40.2
Lsat_1_v5_gn_9_39821 Lactuca sativa HOM05D001078 ORTHO05D000927 3.8e-06 56.6 109 36.7
CANSAT54G2443 Cannabis sativa HOM05D001078 ORTHO05D000927 5.0e-06 56.2 161 29.8
Ca_23105_v3 Cicer arietinum L. HOM05D001078 ORTHO05D000273 5.0e-06 56.2 112 35.7
Haze_24492 Corylus avellana HOM05D001078 ORTHO05D000927 5.0e-06 56.2 131 36.6
VMungo0331G0009 Vigna mungo HOM05D001078 ORTHO05D000927 5.0e-06 56.2 68 44.1
Psat2g191080 Pisum sativum HOM05D001478 ORTHO05D002240 8.6e-06 55.5 83 38.6


User provided reference genes

Program Settings