Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0072771 Rosa chinensis HOM05D009519 ORTHO05D010307 1.8e-15 87.8 40 100.0
RcHm_v2.0_Chr5g0078471 Rosa chinensis HOM05D009519 ORTHO05D010307 2.6e-09 67.4 40 70.0
FAN21G2679 Fragaria x ananassa HOM05D009519 ORTHO05D010307 5.7e-09 66.2 38 73.7
RcHm_v2.0_Chr5g0076251 Rosa chinensis HOM05D009519 ORTHO05D010307 9.7e-09 65.5 34 85.3
RcHm_v2.0_Chr5g0071931 Rosa chinensis HOM05D009519 ORTHO05D010307 3.7e-08 63.5 34 79.4
RcHm_v2.0_Chr5g0074191 Rosa chinensis HOM05D009519 ORTHO05D010307 6.3e-08 62.8 34 79.4
MD03G1113800 Malus domestica HOM05D019995 ORTHO05D012019 8.2e-08 62.4 37 64.9
FAN25G3245 Fragaria x ananassa HOM05D009519 ORTHO05D010307 1.4e-07 61.6 33 78.8
RcHm_v2.0_Chr5g0069571 Rosa chinensis HOM05D009709 ORTHO05D010307 1.8e-07 61.2 34 82.4
RcHm_v2.0_Chr7g0226421 Rosa chinensis HOM05D009519 ORTHO05D010307 4.1e-07 60.1 34 79.4
FvH4_3g42700 Fragaria vesca HOM05D009519 ORTHO05D010307 9.1e-07 58.9 40 65.0
Dinv10023 Davidia involucrata HOM05D010072 ORTHO05D011797 1.6e-06 58.2 39 69.2
Prupe.6G088600 Prunus persica HOM05D009519 ORTHO05D010307 1.6e-06 58.2 34 70.6
Haze_27337 Corylus avellana HOM05D019995 ORTHO05D012019 2.0e-06 57.8 38 60.5
RcHm_v2.0_Chr5g0078541 Rosa chinensis HOM05D009346 ORTHO05D012019 3.5e-06 57.0 33 75.8


User provided reference genes

Program Settings