Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 3.4e-286 987.6 501 100.0
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 4.8e-264 914.1 501 93.6
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 4.8e-264 914.1 494 93.7
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.4e-263 912.5 501 93.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 4.1e-263 911.0 501 93.2
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 3.2e-244 848.2 501 85.6
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 3.6e-243 844.7 501 85.4
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 5.3e-239 830.9 501 84.0
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.9e-212 742.7 507 73.4
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.9e-212 742.7 494 76.1
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 7.3e-212 740.7 506 75.1
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 2.8e-211 738.8 515 74.2
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 6.1e-211 737.6 507 75.1
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 2.9e-208 728.8 513 73.7
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 2.9e-208 728.8 506 72.9
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 4.9e-208 728.0 506 72.9
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 6.4e-208 727.6 467 77.9
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 1.9e-207 726.1 476 76.5
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 3.2e-207 725.3 508 72.8
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.0e-206 722.6 510 72.2
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 2.0e-206 722.6 464 78.2
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 2.7e-206 722.2 510 72.7
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 3.5e-206 721.8 506 72.1
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 6.0e-206 721.1 460 77.8
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.7e-205 719.5 504 72.2
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 3.0e-205 718.8 463 77.1
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 5.0e-205 718.0 512 71.5
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 6.6e-205 717.6 541 70.6
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 4.3e-204 714.9 512 72.1
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 9.5e-204 713.8 514 69.8
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 1.6e-203 713.0 511 71.0
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 2.1e-203 712.6 505 72.1
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 3.6e-203 711.8 505 71.9
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.3e-202 709.1 507 70.6
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 4.0e-202 708.4 476 74.2
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 5.2e-202 708.0 463 76.5
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.0e-201 706.1 514 70.8
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.6e-201 705.7 505 71.3
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 3.4e-201 705.3 503 71.0
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.7e-200 703.0 509 69.7
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 2.2e-200 702.6 518 71.6
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 4.9e-200 701.4 511 71.0
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.4e-199 699.9 512 68.9
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 1.9e-199 699.5 508 70.3
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 1.2e-198 696.8 503 70.0
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 7.3e-196 687.6 479 71.8
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 7.3e-196 687.6 465 73.8
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 4.7e-195 684.9 452 76.3
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.4e-194 683.3 503 69.0
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 2.3e-194 682.6 512 67.4
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 8.9e-194 680.6 453 75.3
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.2e-193 680.2 470 73.0
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 5.8e-193 677.9 463 74.3
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 1.7e-192 676.4 464 73.1
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 9.2e-191 670.6 443 74.5
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.2e-190 670.2 463 72.6
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 2.7e-190 669.1 463 72.4
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 6.0e-190 667.9 463 72.6
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 2.1e-187 659.4 433 77.4
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 6.8e-186 654.4 465 70.3
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 5.8e-185 651.4 502 65.3
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 6.4e-184 647.9 506 66.4
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 6.4e-184 647.9 488 68.4
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 5.4e-183 644.8 480 66.7
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.2e-182 643.7 506 66.4
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 6.6e-181 637.9 476 66.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.1e-180 637.1 476 66.0
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 1.9e-180 636.3 470 66.6
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 4.7e-179 631.7 453 70.4
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 5.3e-178 628.2 469 65.9
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 1.5e-177 626.7 414 74.6
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 5.8e-177 624.8 457 70.5
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 6.4e-176 621.3 441 69.2
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 3.2e-175 619.0 514 61.7
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 1.6e-174 616.7 466 67.4
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 6.0e-174 614.8 513 62.4
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.3e-173 613.6 476 64.3
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 8.7e-173 610.9 467 67.0
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.5e-172 610.1 516 61.0
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 4.3e-172 608.6 518 60.6
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.6e-171 606.7 510 62.4
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 4.8e-171 605.1 513 60.8
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 8.1e-171 604.4 511 60.7
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 2.6e-169 599.4 513 60.4
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 2.7e-166 589.3 443 65.9
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 3.5e-166 589.0 508 61.8
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.1e-164 583.9 457 63.0
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 3.3e-164 582.4 452 63.3
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 3.3e-164 582.4 453 63.6
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 4.3e-164 582.0 453 63.6
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 4.8e-163 578.6 504 58.7
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 3.2e-159 565.8 444 63.3
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.6e-158 563.5 398 71.1
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 5.1e-157 558.5 381 75.6
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.7e-150 536.2 354 73.7
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 2.1e-142 510.0 415 59.8
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 4.3e-140 502.3 455 55.6
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 3.7e-139 499.2 427 58.5
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 5.7e-132 475.3 452 57.5
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.0e-125 454.5 295 75.9
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 3.8e-112 409.5 257 79.4
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 8.5e-112 408.3 342 59.4
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 2.6e-108 396.7 413 47.0
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 4.4e-92 342.8 449 42.1
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.1e-90 336.3 423 48.0
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.2e-86 324.7 228 70.6
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.7e-80 304.3 223 69.5
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 8.4e-67 258.8 426 35.9
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 4.2e-66 256.5 151 82.1
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 3.9e-64 250.0 418 35.6
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 5.8e-60 236.1 134 85.8
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 2.8e-54 217.2 176 61.9
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 3.8e-43 180.3 228 46.9
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 7.9e-41 172.6 228 46.5
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.2e-34 150.6 127 60.6
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 4.2e-34 150.2 149 55.0
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 1.2e-33 148.7 192 42.2
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 3.4e-28 130.6 108 57.4
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 3.6e-17 94.0 143 39.9


User provided reference genes

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