Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0069251 Rosa chinensis HOM05D010115 ORTHO05D014601 8.7e-19 97.8 44 100.0
RcHm_v2.0_Chr5g0069221 Rosa chinensis HOM05D010115 ORTHO05D014601 5.0e-14 82.0 44 79.5
RcHm_v2.0_Chr5g0027691 Rosa chinensis HOM05D009709 ORTHO05D003288 2.7e-12 76.3 44 79.5
Prupe.6G093300 Prunus persica HOM05D000162 ORTHO05D000090 1.6e-09 67.0 43 72.1
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.8e-09 65.5 44 70.5
FAN16G3170 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-08 64.3 44 68.2
MD11G1117500 Malus domestica HOM05D010115 ORTHO05D014601 4.5e-07 58.9 43 60.5
RcHm_v2.0_Chr5g0075791 Rosa chinensis HOM05D000162 ORTHO05D003288 1.0e-06 57.8 35 74.3
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 1.3e-06 57.4 44 63.6
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 1.3e-06 57.4 44 63.6
MD11G1128300 Malus domestica HOM05D014620 ORTHO05D016319 3.8e-06 55.8 42 59.5
RcHm_v2.0_Chr6g0265891 Rosa chinensis HOM05D010115 ORTHO05D000090 5.0e-06 55.5 42 64.3
Ah.13g076900 Amaranthus hybridus HOM05D000162 ORTHO05D000090 6.5e-06 55.1 45 60.0
RcHm_v2.0_Chr5g0076121 Rosa chinensis HOM05D010115 ORTHO05D014601 6.5e-06 55.1 42 64.3


User provided reference genes

Program Settings