Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0065961 Rosa chinensis HOM05D003221 ORTHO05D033910 4.6e-18 93.6 50 100.0
FvH4_3g25540 Fragaria vesca HOM05D003221 ORTHO05D004432 1.1e-16 89.0 49 95.9
FAN11G1198 Fragaria x ananassa HOM05D003221 ORTHO05D004432 1.1e-16 89.0 49 95.9
MD06G1151500 Malus domestica HOM05D003221 ORTHO05D004432 1.1e-16 89.0 49 95.9
MD14G1163300 Malus domestica HOM05D003221 ORTHO05D004432 1.1e-16 89.0 49 95.9
Prupe.5G156700 Prunus persica HOM05D003221 ORTHO05D004432 1.1e-16 89.0 49 95.9
RcHm_v2.0_Chr5g0017921 Rosa chinensis HOM05D003221 ORTHO05D033910 1.1e-16 89.0 49 95.9
RcHm_v2.0_Chr7g0191061 Rosa chinensis HOM05D003221 ORTHO05D004432 1.1e-16 89.0 49 95.9
FAN16G0231 Fragaria x ananassa HOM05D003221 ORTHO05D004432 2.5e-16 87.8 49 93.9
FAN21G3720 Fragaria x ananassa HOM05D003221 ORTHO05D004432 2.5e-16 87.8 49 93.9
FAN25G3633 Fragaria x ananassa HOM05D003221 ORTHO05D004432 2.5e-16 87.8 49 93.9
Cfa018890 Carpinus fangiana HOM05D003221 ORTHO05D004432 7.4e-16 86.3 49 91.8
Haze_07275 Corylus avellana HOM05D003221 ORTHO05D004630 7.4e-16 86.3 49 91.8
Lalb_Chr08g0236971 Lupinus albus HOM05D003221 ORTHO05D004432 7.4e-16 86.3 49 91.8
Lalb_Chr23g0273491 Lupinus albus HOM05D003221 ORTHO05D004432 7.4e-16 86.3 49 91.8
SEGI_11838 Sequoiadendron giganteum HOM05D003221 ORTHO05D004432 7.4e-16 86.3 49 89.8
SEGI_32179 Sequoiadendron giganteum HOM05D003221 ORTHO05D004432 7.4e-16 86.3 49 89.8
Nitab4.5_0000366g0070 Nicotiana tabacum HOM05D003221 ORTHO05D004432 9.7e-16 85.9 49 91.8
Nitab4.5_0006219g0010 Nicotiana tabacum HOM05D003221 ORTHO05D004432 9.7e-16 85.9 49 91.8
Peaxi162Scf00324g00334 Petunia axillaris HOM05D003221 ORTHO05D004432 9.7e-16 85.9 49 91.8
CiPaw.12G035900 Carya illinoinensis HOM05D003221 ORTHO05D004432 1.3e-15 85.5 49 91.8
Hma1.2p1_0046F.1_g027520 Hydrangea macrophylla HOM05D003221 ORTHO05D004432 1.3e-15 85.5 49 91.8
Hma1.2p1_0209F.1_g088430 Hydrangea macrophylla HOM05D003221 ORTHO05D004432 1.3e-15 85.5 49 91.8
QL05p040991 Quercus lobata HOM05D003221 ORTHO05D004432 1.3e-15 85.5 49 91.8
CAN.G5443.1 Capsicum annuum HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 89.8
CAN.G990.4 Capsicum annuum HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 89.8
ECA232G2465 Erigeron canadensis HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 91.8
Migut.I00477 Erythranthe guttata HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 89.8
HanXRQChr09g0272871 Helianthus annuus HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 91.8
Potri.012G093500 Populus trichocarpa HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 89.8
Solyc07g009140.3 Solanum lycopersicum HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 89.8
Sopen07g017130 Solanum pennellii HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 89.8
PGSC0003DMG402024210 Solanum tuberosum HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 89.8
TWI39G0859 Tripterygium wilfordii HOM05D003221 ORTHO05D004432 1.7e-15 85.1 49 91.8
Aqoxy1G01463 Aquilegia oxysepala HOM05D003221 ORTHO05D004432 2.2e-15 84.7 49 89.8
Oeu011575.1 Olea europaea HOM05D003221 ORTHO05D004432 2.2e-15 84.7 49 91.8
Oeu033323.1 Olea europaea HOM05D003221 ORTHO05D004432 2.2e-15 84.7 49 89.8
Potri.015G090900 Populus trichocarpa HOM05D003221 ORTHO05D004432 2.2e-15 84.7 49 89.8
Sabra15G0113000 Salix brachista HOM05D003221 ORTHO05D004432 2.2e-15 84.7 49 89.8
MSTRG.22924 Avicennia marina HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
CANSAT80G0340 Cannabis sativa HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 91.8
ClCG03G003520 Citrullus lanatus HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
MELO3C002335.2 Cucumis melo HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
CsaV3_1G009320 Cucumis sativus L. HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Dinv11105 Davidia involucrata HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Duzib205G0731 Durio zibethinus HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Gohir.A03G062400 Gossypium hirsutum HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Gohir.A12G188100 Gossypium hirsutum HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Gohir.D03G103700 Gossypium hirsutum HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Gohir.D12G190900 Gossypium hirsutum HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Gorai.003G109300 Gossypium raimondii HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Gorai.008G204800 Gossypium raimondii HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Lsat_1_v5_gn_4_78821 Lactuca sativa HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Thecc.03G123100 Theobroma cacao HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
TAR371G1119 Trochodendron aralioides HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
GSVIVG01007538001 Vitis vinifera HOM05D003221 ORTHO05D004432 2.8e-15 84.3 49 89.8
Atru.chr9.1015 Acer truncatum HOM05D003221 ORTHO05D004432 3.7e-15 84.0 49 89.8
ATR0681G172 Amborella trichopoda HOM05D003221 ORTHO05D004432 3.7e-15 84.0 49 89.8
AUR62025726 Chenopodium quinoa HOM05D003221 ORTHO05D004432 3.7e-15 84.0 49 89.8
Ciclev10020559m.g Citrus clementina HOM05D003221 ORTHO05D004432 3.7e-15 84.0 49 89.8
HanXRQChr16g0497921 Helianthus annuus HOM05D003221 ORTHO05D004432 3.7e-15 84.0 49 89.8
PGR083G1499 Punica granatum HOM05D003221 ORTHO05D004432 3.7e-15 84.0 49 87.8
Rhsim08G0185100 Rhododendron simsii HOM05D003221 ORTHO05D004432 3.7e-15 84.0 49 89.8
arahy.Tifrunner.gnm1.ann1.BX07LP Arachis hypogaea HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
arahy.Tifrunner.gnm1.ann1.UKG7ME Arachis hypogaea HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
Dinv38467 Davidia involucrata HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
Glyma.17G127100 Glycine max HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
Manes.06G115400 Manihot esculenta HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
Phvul.003G208200 Phaseolus vulgaris HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
SalBow5G2462 Salvia bowleyana HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
Sc04g0000950 Simmondsia chinensis HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 87.8
SGA_v2.0_scaffold350G49637 Striga asiatica HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
unitig_747.g21330 Utricularia gibba HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 87.8
VMungo1215G0589 Vigna mungo HOM05D003221 ORTHO05D004432 4.8e-15 83.6 49 89.8
Ah.08g218090 Amaranthus hybridus HOM05D003221 ORTHO05D004432 6.3e-15 83.2 49 87.8
Lj4g0007668 Lotus japonicus HOM05D003221 ORTHO05D004432 6.3e-15 83.2 49 87.8
MBI11_g19363_MAGBIO Magnolia biondii HOM05D003221 ORTHO05D004432 6.3e-15 83.2 49 89.8
ATR0824G170 Amborella trichopoda HOM05D003221 ORTHO05D004432 8.2e-15 82.8 49 87.8
MBI06_g43853_MAGBIO Magnolia biondii HOM05D003221 ORTHO05D004432 8.2e-15 82.8 49 87.8
QL10p005036 Quercus lobata HOM05D003221 ORTHO05D004432 8.2e-15 82.8 49 87.8
Actinidia16191 Actinidia chinensis HOM05D003221 ORTHO05D004432 1.1e-14 82.4 49 87.8
Actinidia25611 Actinidia chinensis HOM05D003221 ORTHO05D004432 1.1e-14 82.4 49 87.8
MBI06_g05239_MAGBIO Magnolia biondii HOM05D003221 ORTHO05D004432 1.1e-14 82.4 49 87.8
Os04g0485000 Oryza sativa ssp. japonica HOM05D003221 ORTHO05D004432 1.1e-14 82.4 49 85.7
Sed0024107 Sechium edule HOM05D003221 ORTHO05D004432 1.1e-14 82.4 49 87.8
Hund05648 Selenicereus undatus HOM05D003221 ORTHO05D004432 1.1e-14 82.4 49 85.7
HPP92_024646 Vanilla planifolia HOM05D003221 ORTHO05D004432 1.1e-14 82.4 49 87.8
Aa31LG7G11020 Aethionema arabicum HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
AL7G28360 Arabidopsis lyrata HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
AT4G24820 Arabidopsis thaliana HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
BcaB03g12449 Brassica carinata HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
BcaC06g32856 Brassica carinata HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
BcaC07g38153 Brassica carinata HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
BcaNung07243 Brassica carinata HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
A01p16130 Brassica napus HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
A03p55560 Brassica napus HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
A08p21360 Brassica napus HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
C07p53800 Brassica napus HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
BolC8t48588H Brassica oleracea HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
BraA01t01549Z Brassica rapa HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
BraA03t14625Z Brassica rapa HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
BraA08t34085Z Brassica rapa HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
Carub.0007s1623 Capsella rubella HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
CARHR232220 Cardamine hirsuta HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
Ca_05563_v3 Cicer arietinum L. HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
Thhalv10025431m.g Eutrema salsugineum HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
Glyma.05G044500 Glycine max HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
Lj5g0004669 Lotus japonicus HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
Manes.14G055233 Manihot esculenta HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
Nn4g22458 Nelumbo nucifera HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 85.7
Sp7g22810 Schrenkiella parvula HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 87.8
TPR.G16844 Trifolium pratense HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 85.7
Zm00001eb246330 Zea mays HOM05D003221 ORTHO05D004432 1.4e-14 82.0 49 85.7
C01p20120 Brassica napus HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 87.8
BolC1t01941H Brassica oleracea HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 87.8
CSS0000638 Camellia sinensis var. sinensis HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 87.8
CSS0000758 Camellia sinensis var. sinensis HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 87.8
CSS0008999 Camellia sinensis var. sinensis HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 87.8
CSS0042115 Camellia sinensis var. sinensis HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 87.8
Duzib068G0069 Durio zibethinus HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 87.8
Duzib084G0381 Durio zibethinus HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 87.8
Nn3g16577 Nelumbo nucifera HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 85.7
Sed0014675 Sechium edule HOM05D003221 ORTHO05D004432 1.8e-14 81.6 49 85.7
TAR629G2346 Trochodendron aralioides HOM05D005223 ORTHO05D006449 1.8e-14 81.6 49 85.7
EL10Ac7g18076 Beta vulgaris HOM05D003221 ORTHO05D004432 2.4e-14 81.3 49 85.7
Cpa.g.sc4.74 Carica papaya HOM05D003221 ORTHO05D004432 2.4e-14 81.3 49 87.8
Cc04_g10290 Coffea canephora HOM05D003221 ORTHO05D004432 2.4e-14 81.3 49 87.8
Lalb_Chr07g0183231 Lupinus albus HOM05D003221 ORTHO05D004432 2.4e-14 81.3 49 85.7
TPR.G37528 Trifolium pratense HOM05D003221 ORTHO05D004432 2.4e-14 81.3 49 85.7
TWI14G1333 Tripterygium wilfordii HOM05D003221 ORTHO05D004432 2.4e-14 81.3 49 85.7
vmacro19238 Vaccinium macrocarpon HOM05D003221 ORTHO05D004432 2.4e-14 81.3 49 87.8
CDE04G0976 Ceratophyllum demersum HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 85.7
Eucgr.I00301 Eucalyptus grandis HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 83.7
Medtr4g104080 Medicago truncatula HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 85.7
PSO063G7046 Papaver somniferum HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 87.8
PSO170G4862 Papaver somniferum HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 87.8
PSO445G0024 Papaver somniferum HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 87.8
PSO782G0707 Papaver somniferum HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 87.8
Psat4g064960 Pisum sativum HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 85.7
QL10p005029 Quercus lobata HOM05D003221 ORTHO05D004432 3.1e-14 80.9 49 85.7
MSTRG.4587 Avicennia marina HOM05D003221 ORTHO05D004432 4.1e-14 80.5 49 87.8
BolC7t45870H Brassica oleracea HOM05D003221 ORTHO05D004432 4.1e-14 80.5 49 85.7
Lj5A100G57 Lonicera japonica HOM05D003221 ORTHO05D004432 4.1e-14 80.5 49 85.7
Os02g0600100 Oryza sativa ssp. japonica HOM05D003221 ORTHO05D004432 4.1e-14 80.5 49 81.6
THA.LOC104825005 Tarenaya hassleriana HOM05D003221 ORTHO05D004432 4.1e-14 80.5 49 85.7
DCAR_027511 Daucus carota HOM05D003221 ORTHO05D004432 5.3e-14 80.1 49 85.7
Eucgr.K02756 Eucalyptus grandis HOM05D003221 ORTHO05D004432 5.3e-14 80.1 49 81.6
Glyma.05G044900 Glycine max HOM05D003221 ORTHO05D004432 5.3e-14 80.1 49 87.8
Ah.15g095310 Amaranthus hybridus HOM05D003221 ORTHO05D004432 6.9e-14 79.7 49 85.7
Lj9A475T64 Lonicera japonica HOM05D003221 ORTHO05D004432 6.9e-14 79.7 49 85.7
CSS0006566 Camellia sinensis var. sinensis HOM05D003221 ORTHO05D004432 9.1e-14 79.3 48 87.5
Gohir.D09G245900 Gossypium hirsutum HOM05D003221 ORTHO05D004432 9.1e-14 79.3 49 83.7
Gorai.006G270400 Gossypium raimondii HOM05D003221 ORTHO05D004432 9.1e-14 79.3 49 83.7
THA.LOC104811603 Tarenaya hassleriana HOM05D003221 ORTHO05D004432 9.1e-14 79.3 49 85.7
Zm00001eb079270 Zea mays HOM05D003221 ORTHO05D004432 9.1e-14 79.3 49 83.7
Gohir.A09G245000 Gossypium hirsutum HOM05D003221 ORTHO05D004432 1.2e-13 79.0 49 83.7
CiPaw.11G011900 Carya illinoinensis HOM05D003221 ORTHO05D004432 1.5e-13 78.6 49 85.7
TAR626G0734 Trochodendron aralioides HOM05D003221 ORTHO05D004432 1.5e-13 78.6 48 83.3
AagrBONN_evm.TU.Sc2ySwM_344.2231 Anthoceros agrestis HOM05D003221 ORTHO05D004432 3.4e-13 77.4 49 83.7
CSS0035074 Camellia sinensis var. sinensis HOM05D003221 ORTHO05D004432 3.4e-13 77.4 49 83.7
AagrBONN_evm.TU.Sc2ySwM_228.4449 Anthoceros agrestis HOM05D003221 ORTHO05D004432 4.5e-13 77.0 49 81.6
CSS0014635 Camellia sinensis var. sinensis HOM05D003221 ORTHO05D033910 1.0e-12 75.9 46 87.0
Pp3c10_7470 Physcomitrium patens HOM05D003221 ORTHO05D004432 1.0e-12 75.9 49 79.6
SMO118G0024 Selaginella moellendorffii HOM05D003221 ORTHO05D004432 1.0e-12 75.9 49 77.6
Mapoly0014s0216 Marchantia polymorpha HOM05D003221 ORTHO05D004432 1.3e-12 75.5 49 81.6
CBR_g40800 Chara braunii HOM05D003221 ORTHO05D004432 1.7e-12 75.1 49 77.6
CDE07G0656 Ceratophyllum demersum HOM05D003221 ORTHO05D004432 2.2e-12 74.7 46 82.6
Pp3c12_14600 Physcomitrium patens HOM05D003221 ORTHO05D004432 1.1e-11 72.4 49 77.6
SHI33980 Sapria himalayana HOM05D003221 ORTHO05D004432 1.1e-11 72.4 49 79.6
Medtr8g464820 Medicago truncatula HOM05D003221 ORTHO05D004432 4.2e-11 70.5 49 79.6
CARHR238350 Cardamine hirsuta HOM05D003221 ORTHO05D004432 3.6e-10 67.4 49 77.6
Medtr8g046560 Medicago truncatula HOM05D003221 ORTHO05D004432 3.0e-09 64.3 43 83.7
CSS0004138 Camellia sinensis var. sinensis HOM05D003221 ORTHO05D004432 2.6e-08 61.2 38 86.8


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