Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0065171 Rosa chinensis HOM05D014620 ORTHO05D016319 6.3e-43 178.7 196 100.0
FAN11G2427 Fragaria x ananassa HOM05D014620 ORTHO05D016319 1.4e-13 81.3 54 72.2
FAN25G1189 Fragaria x ananassa HOM05D014620 ORTHO05D016319 2.4e-10 70.5 47 72.3
MD11G1122400 Malus domestica HOM05D000162 ORTHO05D000090 1.2e-09 68.2 56 62.5
RcHm_v2.0_Chr5g0076111 Rosa chinensis HOM05D014620 ORTHO05D016319 7.8e-09 65.5 46 69.6
FAN25G3795 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.3e-08 64.7 178 32.0
RcHm_v2.0_Chr5g0069341 Rosa chinensis HOM05D014620 ORTHO05D016319 3.0e-08 63.5 46 67.4
RcHm_v2.0_Chr5g0077511 Rosa chinensis HOM05D000162 ORTHO05D010307 5.0e-08 62.8 37 73.0
FvH4_3g37480 Fragaria vesca HOM05D000162 ORTHO05D000090 6.6e-08 62.4 37 73.0
RcHm_v2.0_Chr5g0071481 Rosa chinensis HOM05D000162 ORTHO05D000090 6.6e-08 62.4 37 70.3
FAN02G2649 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.6e-08 62.0 37 73.0
FAN21G2460 Fragaria x ananassa HOM05D009519 ORTHO05D000090 8.6e-08 62.0 37 70.3
RcHm_v2.0_Chr5g0062311 Rosa chinensis HOM05D014620 ORTHO05D016319 8.6e-08 62.0 47 63.8
RcHm_v2.0_Chr5g0072831 Rosa chinensis HOM05D000162 ORTHO05D010307 8.6e-08 62.0 37 75.7
FvH4_3g39650 Fragaria vesca HOM05D000162 ORTHO05D003288 1.1e-07 61.6 37 70.3
FAN11G0438 Fragaria x ananassa HOM05D000027 ORTHO05D001163 1.1e-07 61.6 37 70.3
FAN16G1933 Fragaria x ananassa HOM05D000027 ORTHO05D001163 1.1e-07 61.6 37 70.3
FAN21G0796 Fragaria x ananassa HOM05D014620 ORTHO05D016319 1.1e-07 61.6 42 64.3
MD11G1117400 Malus domestica HOM05D000162 ORTHO05D010307 1.1e-07 61.6 37 70.3
FvH4_4g22280 Fragaria vesca HOM05D000162 ORTHO05D000090 1.5e-07 61.2 37 73.0
Prupe.6G087400 Prunus persica HOM05D000162 ORTHO05D010307 1.9e-07 60.8 37 73.0
FvH4_3g39940 Fragaria vesca HOM05D000162 ORTHO05D000090 2.5e-07 60.5 37 67.6
FAN07G1899 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.5e-07 60.5 37 73.0
FAN25G0683 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.5e-07 60.5 37 67.6
FAN11G3989 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.3e-07 59.7 37 67.6
RcHm_v2.0_Chr5g0074941 Rosa chinensis HOM05D014620 ORTHO05D016319 4.3e-07 59.7 44 65.9
FAN11G2459 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.6e-07 59.3 37 67.6
Prupe.8G078200 Prunus persica HOM05D000162 ORTHO05D000090 5.6e-07 59.3 37 67.6
FAN05G1965 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.3e-07 58.9 37 70.3
FvH4_3g39890 Fragaria vesca HOM05D000162 ORTHO05D000090 9.5e-07 58.5 37 64.9
FvH4_3g40130 Fragaria vesca HOM05D000162 ORTHO05D000090 9.5e-07 58.5 37 64.9
FAN21G3095 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.5e-07 58.5 37 64.9
FAN21G3177 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.5e-07 58.5 37 64.9
FAN25G0292 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.5e-07 58.5 37 70.3
FAN16G0919 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.2e-06 58.2 37 62.2
FAN16G1190 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.2e-06 58.2 37 70.3
RcHm_v2.0_Chr5g0061091 Rosa chinensis HOM05D000162 ORTHO05D000090 1.6e-06 57.8 37 70.3
RcHm_v2.0_Chr5g0074231 Rosa chinensis HOM05D009519 ORTHO05D010307 1.6e-06 57.8 37 64.9
FAN05G5528 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.1e-06 57.4 37 67.6
FvH4_4g22270 Fragaria vesca HOM05D000162 ORTHO05D000090 3.6e-06 56.6 37 70.3
FvH4_3g42430 Fragaria vesca HOM05D000162 ORTHO05D000090 4.7e-06 56.2 37 67.6
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.7e-06 56.2 37 62.2
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 4.7e-06 56.2 37 64.9
RcHm_v2.0_Chr5g0062141 Rosa chinensis HOM05D014620 ORTHO05D016319 4.7e-06 56.2 41 68.3
RcHm_v2.0_Chr5g0073761 Rosa chinensis HOM05D000162 ORTHO05D000090 4.7e-06 56.2 37 70.3
FAN21G2643 Fragaria x ananassa HOM05D009519 ORTHO05D000090 6.2e-06 55.8 37 64.9
RcHm_v2.0_Chr5g0077521 Rosa chinensis HOM05D000162 ORTHO05D000090 6.2e-06 55.8 36 66.7
RcHm_v2.0_Chr5g0077541 Rosa chinensis HOM05D009519 ORTHO05D000090 6.2e-06 55.8 32 75.0
FAN16G2089 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.0e-06 55.5 34 70.6
Prupe.3G114600 Prunus persica HOM05D009519 ORTHO05D010307 8.0e-06 55.5 37 64.9


User provided reference genes

Program Settings