Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0064571 Rosa chinensis HOM05D000005 ORTHO05D022667 4.8e-69 264.2 121 100.0
RcHm_v2.0_Chr5g0064871 Rosa chinensis HOM05D000005 ORTHO05D000012 4.7e-56 221.1 121 85.1
RcHm_v2.0_Chr3g0481891 Rosa chinensis HOM05D000005 ORTHO05D022667 9.8e-30 133.7 121 57.9
RcHm_v2.0_Chr3g0482041 Rosa chinensis HOM05D000005 ORTHO05D000012 2.4e-28 129.0 126 57.1
FAN05G4047 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.5e-25 119.8 121 52.9
FvH4_6g05610 Fragaria vesca HOM05D000005 ORTHO05D000012 1.9e-25 119.4 125 48.0
FAN02G4201 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.5e-25 119.0 121 52.1
FvH4_1g04740 Fragaria vesca HOM05D000005 ORTHO05D000012 7.3e-25 117.5 123 52.0
FAN05G1331 Fragaria x ananassa HOM05D000005 ORTHO05D012518 2.8e-24 115.5 125 52.0
FAN19G1333 Fragaria x ananassa HOM05D000005 ORTHO05D000402 3.6e-24 115.2 123 51.2
FAN05G1309 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.2e-24 114.4 119 53.8
RcHm_v2.0_Chr3g0481981 Rosa chinensis HOM05D000005 ORTHO05D000012 3.1e-23 112.1 121 52.9
FAN05G1394 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.0e-23 111.7 122 50.8
FAN02G1613 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.9e-23 110.5 125 50.4
FAN05G1815 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.9e-23 110.5 125 51.2
FAN05G0011 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.2e-22 110.2 125 49.6
FAN14G2116 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.4e-22 108.6 122 47.5
FvH4_6g04730 Fragaria vesca HOM05D000005 ORTHO05D000012 1.3e-21 106.7 120 49.2
FvH4_6g04250 Fragaria vesca HOM05D000005 ORTHO05D000012 1.7e-21 106.3 125 49.6
FvH4_6g05490 Fragaria vesca HOM05D000005 ORTHO05D000012 1.7e-21 106.3 122 50.8
FAN14G2162 Fragaria x ananassa HOM05D000005 ORTHO05D022667 2.2e-21 105.9 122 47.5
FAN14G2233 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.7e-21 105.1 122 50.0
FvH4_6g04060 Fragaria vesca HOM05D000005 ORTHO05D022667 4.1e-20 101.7 122 46.7
FvH4_6g04350 Fragaria vesca HOM05D000005 ORTHO05D000012 3.5e-19 98.6 122 48.4
FAN14G4126 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.9e-18 95.1 121 47.1
FAN09G2091 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.3e-17 91.7 74 60.8
FAN09G4901 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.3e-17 91.7 74 60.8
FAN11G1844 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.4e-14 81.6 69 62.3
FAN21G1223 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-13 79.7 121 41.3
FAN14G2024 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.9e-13 79.0 109 45.0
FAN11G3137 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.9e-12 76.3 121 40.5
FAN16G0432 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.6e-11 73.2 121 38.8
FvH4_3g36140 Fragaria vesca HOM05D000005 ORTHO05D000012 2.1e-11 72.8 121 40.5
FAN05G5750 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.6e-11 71.6 80 46.2
FvH4_2g14320 Fragaria vesca HOM05D000005 ORTHO05D000012 5.1e-10 68.2 140 36.4
FAN02G1730 Fragaria x ananassa HOM05D000005 ORTHO05D022667 1.5e-09 66.6 128 35.2
MD05G1020100 Malus domestica HOM05D000005 ORTHO05D000012 1.5e-09 66.6 124 35.5
MD05G1019700 Malus domestica HOM05D000005 ORTHO05D000012 1.2e-08 63.5 127 36.2
RcHm_v2.0_Chr6g0276631 Rosa chinensis HOM05D000005 ORTHO05D000012 2.1e-08 62.8 137 32.8
RcHm_v2.0_Chr6g0276591 Rosa chinensis HOM05D000005 ORTHO05D001748 2.3e-07 59.3 135 30.4
FAN15G1300 Fragaria x ananassa HOM05D000435 ORTHO05D012716 1.2e-06 57.0 130 34.6
FvH4_3g36130 Fragaria vesca HOM05D000005 ORTHO05D022667 1.5e-06 56.6 31 77.4
MD10G1021000 Malus domestica HOM05D000005 ORTHO05D000012 9.9e-06 53.9 126 32.5


User provided reference genes

Program Settings