Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0064541 Rosa chinensis HOM05D004676 ORTHO05D005661 1.7e-105 386.7 323 100.0
FAN21G2159 Fragaria x ananassa HOM05D004676 ORTHO05D005661 1.2e-82 310.8 328 77.7
FAN25G1996 Fragaria x ananassa HOM05D004676 ORTHO05D005661 3.5e-82 309.3 329 80.9
FAN11G0391 Fragaria x ananassa HOM05D004676 ORTHO05D005661 2.3e-81 306.6 325 81.8
FvH4_3g36111 Fragaria vesca HOM05D004676 ORTHO05D005661 9.5e-80 301.2 326 81.0
FAN16G2805 Fragaria x ananassa HOM05D004676 ORTHO05D005661 2.6e-77 293.1 326 79.4
Prupe.6G077300 Prunus persica HOM05D004676 ORTHO05D005661 4.6e-74 282.3 325 75.7
CsaV3_6G016860 Cucumis sativus L. HOM05D004676 ORTHO05D005661 3.0e-65 253.1 207 73.4
TAR633G1457 Trochodendron aralioides HOM05D004676 ORTHO05D005661 9.5e-64 248.1 207 70.0
MD03G1093300 Malus domestica HOM05D004676 ORTHO05D005661 1.1e-62 244.6 181 76.2
Haze_24097 Corylus avellana HOM05D004676 ORTHO05D005661 3.1e-62 243.0 181 76.2
MELO3C025917.2 Cucumis melo HOM05D004676 ORTHO05D005661 6.8e-62 241.9 175 78.9
RcHm_v2.0_Chr5g0064551 Rosa chinensis HOM05D004676 ORTHO05D005661 6.8e-62 241.9 180 76.7
MD11G1108100 Malus domestica HOM05D004676 ORTHO05D005661 1.2e-61 241.1 175 77.1
CiPaw.13G094200 Carya illinoinensis HOM05D004676 ORTHO05D005661 4.4e-61 239.2 175 74.3
ClCG02G020150 Citrullus lanatus HOM05D004676 ORTHO05D005661 5.8e-61 238.8 207 72.9
Atru.chr3.3906 Acer truncatum HOM05D004676 ORTHO05D005661 7.5e-61 238.4 198 70.7
Cfa011505 Carpinus fangiana HOM05D004676 ORTHO05D005661 1.4e-59 234.2 182 74.2
HanXRQChr01g0009481 Helianthus annuus HOM05D004676 ORTHO05D005661 1.9e-59 233.8 181 75.1
QL09p008735 Quercus lobata HOM05D004676 ORTHO05D005661 2.4e-59 233.4 212 68.9
Gohir.D07G102900 Gossypium hirsutum HOM05D004676 ORTHO05D005661 4.1e-59 232.6 208 73.6
Sc21g0005490 Simmondsia chinensis HOM05D004676 ORTHO05D005661 9.2e-59 231.5 182 75.8
Thecc.09G321600 Theobroma cacao HOM05D004676 ORTHO05D005661 1.2e-58 231.1 207 74.4
Ciclev10028807m.g Citrus clementina HOM05D004676 ORTHO05D005661 1.6e-58 230.7 213 68.5
Duzib168G2248 Durio zibethinus HOM05D004676 ORTHO05D005661 2.7e-58 229.9 175 77.7
Lj1P153T22 Lonicera japonica HOM05D004676 ORTHO05D005661 3.5e-58 229.6 174 75.9
Cpa.g.sc161.42 Carica papaya HOM05D004676 ORTHO05D005661 4.6e-58 229.2 210 69.5
Haze_12047 Corylus avellana HOM05D004676 ORTHO05D005661 6.0e-58 228.8 205 67.8
Rhsim01G0227600 Rhododendron simsii HOM05D004676 ORTHO05D005661 6.0e-58 228.8 208 71.6
TAR100G0004 Trochodendron aralioides HOM05D004676 ORTHO05D005661 7.8e-58 228.4 207 64.3
Manes.02G133000 Manihot esculenta HOM05D004676 ORTHO05D005661 1.0e-57 228.0 205 65.4
Manes.01G173800 Manihot esculenta HOM05D004676 ORTHO05D005661 3.9e-57 226.1 205 72.2
Thecc.09G321800 Theobroma cacao HOM05D004676 ORTHO05D005661 3.9e-57 226.1 208 66.3
Nn1g00565 Nelumbo nucifera HOM05D004676 ORTHO05D005661 5.1e-57 225.7 177 72.3
Cpa.g.sc81.149 Carica papaya HOM05D004676 ORTHO05D005661 6.6e-57 225.3 206 67.0
Sed0011846 Sechium edule HOM05D004676 ORTHO05D005661 6.6e-57 225.3 211 70.6
Gohir.A07G098600 Gossypium hirsutum HOM05D004676 ORTHO05D005661 8.6e-57 224.9 180 74.4
Gorai.001G110800 Gossypium raimondii HOM05D004676 ORTHO05D005661 8.6e-57 224.9 180 74.4
MBI14_g16284_MAGBIO Magnolia biondii HOM05D004676 ORTHO05D005661 1.5e-56 224.2 206 68.4
Potri.001G148000 Populus trichocarpa HOM05D004676 ORTHO05D005661 1.9e-56 223.8 176 75.0
CiPaw.14G068300 Carya illinoinensis HOM05D004676 ORTHO05D005661 2.5e-56 223.4 182 70.9
TAR677G0002 Trochodendron aralioides HOM05D004676 ORTHO05D005661 3.3e-56 223.0 207 63.3
CANSAT21G2535 Cannabis sativa HOM05D004676 ORTHO05D005661 4.3e-56 222.6 184 73.4
Actinidia23939 Actinidia chinensis HOM05D004676 ORTHO05D005661 5.6e-56 222.2 201 64.7
Dinv12426 Davidia involucrata HOM05D004676 ORTHO05D005661 7.3e-56 221.9 181 74.6
unitig_747.g22032 Utricularia gibba HOM05D004676 ORTHO05D005661 7.3e-56 221.9 209 65.6
TWI79G0464 Tripterygium wilfordii HOM05D004676 ORTHO05D005661 1.2e-55 221.1 330 63.9
Sabra01G0117800 Salix brachista HOM05D004676 ORTHO05D005661 3.6e-55 219.5 208 60.1
Lsat_1_v5_gn_5_170600 Lactuca sativa HOM05D004676 ORTHO05D005661 8.1e-55 218.4 131 81.7
PGR119G2251 Punica granatum HOM05D004676 ORTHO05D005661 8.1e-55 218.4 186 72.6
RcHm_v2.0_Chr5g0064841 Rosa chinensis HOM05D004676 ORTHO05D005661 8.1e-55 218.4 146 75.3
Sabra01G0116300 Salix brachista HOM05D004676 ORTHO05D005661 8.1e-55 218.4 208 59.1
Glyma.20G104700 Glycine max HOM05D004676 ORTHO05D005661 1.1e-54 218.0 205 63.9
Hma1.2p1_0418F.1_g149200 Hydrangea macrophylla HOM05D004676 ORTHO05D005661 1.1e-54 218.0 325 71.7
vmacro05212 Vaccinium macrocarpon HOM05D004676 ORTHO05D005661 1.8e-54 217.2 145 77.2
AT2G28910 Arabidopsis thaliana HOM05D004676 ORTHO05D005661 2.4e-54 216.9 175 75.4
Eucgr.E01963 Eucalyptus grandis HOM05D004676 ORTHO05D005661 2.4e-54 216.9 179 74.9
THA.LOC104800662 Tarenaya hassleriana HOM05D004676 ORTHO05D005661 2.4e-54 216.9 175 74.3
Hund18907 Selenicereus undatus HOM05D004676 ORTHO05D005661 3.1e-54 216.5 184 71.2
FAN11G1736 Fragaria x ananassa HOM05D002246 ORTHO05D002308 4.0e-54 216.1 182 70.3
Glyma.10G284600 Glycine max HOM05D004676 ORTHO05D005661 4.0e-54 216.1 207 64.3
unitig_0.g1557 Utricularia gibba HOM05D004676 ORTHO05D005661 4.0e-54 216.1 210 63.8
Ah.04g160390 Amaranthus hybridus HOM05D004676 ORTHO05D005661 6.8e-54 215.3 177 73.4
Migut.L00671 Erythranthe guttata HOM05D004676 ORTHO05D005661 6.8e-54 215.3 179 73.2
Nitab4.5_0005880g0060 Nicotiana tabacum HOM05D004676 ORTHO05D005661 1.2e-53 214.5 182 74.2
CARHR122080 Cardamine hirsuta HOM05D004676 ORTHO05D005661 2.6e-53 213.4 175 74.3
FvH4_3g36120 Fragaria vesca HOM05D002246 ORTHO05D002308 2.6e-53 213.4 182 68.1
THA.LOC104826325 Tarenaya hassleriana HOM05D004676 ORTHO05D005661 2.6e-53 213.4 182 70.9
AUR62000799 Chenopodium quinoa HOM05D004676 ORTHO05D005661 3.4e-53 213.0 176 73.3
AUR62005169 Chenopodium quinoa HOM05D004676 ORTHO05D005661 3.4e-53 213.0 176 73.3
Oeu019194.1 Olea europaea HOM05D004676 ORTHO05D005661 3.4e-53 213.0 333 68.5
Carub.0004s0990 Capsella rubella HOM05D004676 ORTHO05D005661 4.4e-53 212.6 175 73.7
Nitab4.5_0001424g0070 Nicotiana tabacum HOM05D004676 ORTHO05D005661 4.4e-53 212.6 182 73.6
Sp4g11720 Schrenkiella parvula HOM05D004676 ORTHO05D005661 4.4e-53 212.6 175 74.3
Aa31LG5G7310 Aethionema arabicum HOM05D004676 ORTHO05D005661 7.6e-53 211.8 180 70.6
AL4G23440 Arabidopsis lyrata HOM05D004676 ORTHO05D005661 1.3e-52 211.1 175 73.7
Eucgr.E01882 Eucalyptus grandis HOM05D004676 ORTHO05D005661 1.3e-52 211.1 148 74.3
Migut.L00698 Erythranthe guttata HOM05D004676 ORTHO05D005661 1.7e-52 210.7 180 72.8
PGSC0003DMG400018489 Solanum tuberosum HOM05D004676 ORTHO05D005661 1.7e-52 210.7 182 73.6
SGA_v2.0_scaffold47G17549 Striga asiatica HOM05D004676 ORTHO05D005661 1.7e-52 210.7 180 71.1
SGA_v2.0_scaffold154G37155 Striga asiatica HOM05D004676 ORTHO05D005661 2.2e-52 210.3 183 68.3
Migut.D02100 Erythranthe guttata HOM05D004676 ORTHO05D005661 4.9e-52 209.1 177 71.8
Eucgr.J02052 Eucalyptus grandis HOM05D004676 ORTHO05D005661 4.9e-52 209.1 218 65.1
Nitab4.5_0003154g0010 Nicotiana tabacum HOM05D004676 ORTHO05D005661 4.9e-52 209.1 182 72.5
Oeu051436.2 Olea europaea HOM05D004676 ORTHO05D005661 6.4e-52 208.8 209 69.4
CAN.G137.34 Capsicum annuum HOM05D004676 ORTHO05D005661 1.1e-51 208.0 181 72.9
ECA248G3797 Erigeron canadensis HOM05D004676 ORTHO05D005661 1.1e-51 208.0 174 69.5
Peaxi162Scf00045g00052 Petunia axillaris HOM05D004676 ORTHO05D005661 1.4e-51 207.6 182 72.0
Aqoxy7G03598 Aquilegia oxysepala HOM05D004676 ORTHO05D005661 1.9e-51 207.2 181 70.2
SHI01165 Sapria himalayana HOM05D004676 ORTHO05D005661 2.4e-51 206.8 182 62.6
Actinidia34405 Actinidia chinensis HOM05D004676 ORTHO05D005661 4.1e-51 206.1 175 65.1
Solyc08g005450.3 Solanum lycopersicum HOM05D004676 ORTHO05D005661 5.4e-51 205.7 182 72.0
Sopen08g001490 Solanum pennellii HOM05D004676 ORTHO05D005661 1.2e-50 204.5 182 71.4
EL10Ac4g09397 Beta vulgaris HOM05D004676 ORTHO05D005661 1.6e-50 204.1 177 70.1
DCAR_025381 Daucus carota HOM05D004676 ORTHO05D005661 1.6e-50 204.1 186 71.0
BcaC02g11024 Brassica carinata HOM05D004676 ORTHO05D005661 2.1e-50 203.8 175 72.0
C04p22070 Brassica napus HOM05D004676 ORTHO05D005661 2.1e-50 203.8 175 72.0
BolC4t23730H Brassica oleracea HOM05D004676 ORTHO05D005661 2.1e-50 203.8 175 72.0
TAR588G0001 Trochodendron aralioides HOM05D004676 ORTHO05D005661 2.1e-50 203.8 179 64.8
TWI75G1679 Tripterygium wilfordii HOM05D004676 ORTHO05D005661 6.0e-50 202.2 336 59.5
ECA233G5350 Erigeron canadensis HOM05D004676 ORTHO05D005661 7.8e-50 201.8 181 66.3
Phvul.007G016200 Phaseolus vulgaris HOM05D004676 ORTHO05D005661 1.7e-49 200.7 182 65.9
A07p19390 Brassica napus HOM05D004676 ORTHO05D005661 2.3e-49 200.3 175 70.9
TPR.G18864 Trifolium pratense HOM05D004676 ORTHO05D005661 1.9e-48 197.2 175 67.4
Cc01_g12890 Coffea canephora HOM05D004676 ORTHO05D005661 2.5e-48 196.8 185 66.5
Psat0s2898g0040 Pisum sativum HOM05D004676 ORTHO05D005661 2.5e-48 196.8 174 69.0
PSO151G0082 Papaver somniferum HOM05D004676 ORTHO05D005661 5.6e-48 195.7 186 66.1
PSO339G5531 Papaver somniferum HOM05D004676 ORTHO05D005661 5.6e-48 195.7 186 65.6
TAR383G0008 Trochodendron aralioides HOM05D004676 ORTHO05D005661 5.6e-48 195.7 207 59.4
TAR455G0002 Trochodendron aralioides HOM05D004676 ORTHO05D005661 5.6e-48 195.7 207 59.4
Ca_11220_v3 Cicer arietinum L. HOM05D004676 ORTHO05D005661 9.6e-48 194.9 175 67.4
Lalb_Chr02g0143571 Lupinus albus HOM05D004676 ORTHO05D005661 1.6e-47 194.1 199 58.8
BolC4t27336H Brassica oleracea HOM05D004676 ORTHO05D005661 2.1e-47 193.7 174 67.8
VMungo0720G1898 Vigna mungo HOM05D004676 ORTHO05D005661 4.7e-47 192.6 182 66.5
ATR0733G034 Amborella trichopoda HOM05D004676 ORTHO05D005661 6.2e-47 192.2 131 73.3
CDE04G1893 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 1.4e-46 191.0 176 65.9
CDE07G0255 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 1.8e-46 190.7 209 59.8
Ca_09918_v3 Cicer arietinum L. HOM05D004676 ORTHO05D005661 1.8e-46 190.7 210 62.4
SEGI_40255 Sequoiadendron giganteum HOM05D004676 ORTHO05D005661 2.4e-46 190.3 183 60.1
BcaB02g10212 Brassica carinata HOM05D004676 ORTHO05D005661 5.2e-46 189.1 175 69.7
DCAR_024536 Daucus carota HOM05D004676 ORTHO05D005661 1.5e-45 187.6 140 67.9
Lj5g0019317 Lotus japonicus HOM05D004676 ORTHO05D005661 2.0e-45 187.2 176 58.0
arahy.Tifrunner.gnm1.ann1.ID2MIU Arachis hypogaea HOM05D004676 ORTHO05D005661 4.4e-45 186.0 177 63.8
Lalb_Chr06g0163861 Lupinus albus HOM05D004676 ORTHO05D005661 4.4e-45 186.0 178 57.3
HPP92_003389 Vanilla planifolia HOM05D004676 ORTHO05D005661 1.3e-44 184.5 177 62.7
BraA07t29644Z Brassica rapa HOM05D004676 ORTHO05D005661 3.2e-43 179.9 166 67.5
A04p05090 Brassica napus HOM05D004676 ORTHO05D005661 3.5e-42 176.4 174 66.1
A04p21940 Brassica napus HOM05D004676 ORTHO05D005661 3.5e-42 176.4 174 66.1
BraA04t17761Z Brassica rapa HOM05D004676 ORTHO05D005661 3.5e-42 176.4 174 66.1
COL.COLO4_18509 Corchorus olitorius HOM05D004676 ORTHO05D005661 5.1e-41 172.6 121 69.4
Pp3c8_12040 Physcomitrium patens HOM05D004676 ORTHO05D005661 4.3e-40 169.5 189 54.0
BcaC02g08125 Brassica carinata HOM05D004676 ORTHO05D005661 7.3e-40 168.7 121 71.1
Mapoly0006s0051 Marchantia polymorpha HOM05D004676 ORTHO05D005661 1.6e-39 167.5 180 60.0
Os09g0103700 Oryza sativa ssp. japonica HOM05D004676 ORTHO05D005661 1.6e-39 167.5 205 54.1
AagrBONN_evm.TU.Sc2ySwM_228.4612 Anthoceros agrestis HOM05D004676 ORTHO05D005661 3.6e-39 166.4 185 58.9
Zm00001eb307410 Zea mays HOM05D004676 ORTHO05D005661 9.9e-37 158.3 130 64.6
Zm00001eb095710 Zea mays HOM05D004676 ORTHO05D005661 1.7e-36 157.5 138 62.3
RcHm_v2.0_Chr5g0064811 Rosa chinensis HOM05D004676 ORTHO05D005661 6.4e-36 155.6 180 57.2
Os05g0297400 Oryza sativa ssp. japonica HOM05D004676 ORTHO05D005661 4.6e-34 149.4 188 50.5
SMO117G0168 Selaginella moellendorffii HOM05D004676 ORTHO05D005661 6.0e-34 149.1 124 64.5
ECA233G0785 Erigeron canadensis HOM05D004676 ORTHO05D005661 6.7e-33 145.6 96 74.0
ATR0693G379 Amborella trichopoda HOM05D004676 ORTHO05D005661 1.4e-30 137.9 176 58.0
ECA233G0017 Erigeron canadensis HOM05D004676 ORTHO05D005661 1.4e-30 137.9 96 71.9
C04p58100 Brassica napus HOM05D004676 ORTHO05D005661 2.4e-30 137.1 97 73.2
BraA07t30700Z Brassica rapa HOM05D004676 ORTHO05D005661 4.9e-28 129.4 92 76.1
Eucgr.E01961 Eucalyptus grandis HOM05D004676 ORTHO05D005661 2.4e-27 127.1 129 67.4
CBR_g53496 Chara braunii HOM05D004676 ORTHO05D137281 6.0e-26 122.5 114 55.3
TAR625G0807 Trochodendron aralioides HOM05D004676 ORTHO05D005661 6.0e-26 122.5 163 53.4
MD11G1107700 Malus domestica HOM05D004676 ORTHO05D005661 3.7e-23 113.2 72 75.0
HPP92_003385 Vanilla planifolia HOM05D004676 ORTHO05D005661 5.3e-22 109.4 115 60.9
ECA233G4946 Erigeron canadensis HOM05D004676 ORTHO05D005661 3.8e-20 103.2 181 47.5
Dinv42954 Davidia involucrata HOM05D004736 ORTHO05D006424 2.3e-17 94.0 49 89.8
Dinv43146 Davidia involucrata HOM05D004736 ORTHO05D006424 2.3e-17 94.0 49 89.8
ECA247G4102 Erigeron canadensis HOM05D004676 ORTHO05D005661 1.9e-16 90.9 112 49.1
ECA233G2734 Erigeron canadensis HOM05D004676 ORTHO05D005661 1.0e-12 78.6 45 82.2
SEGI_06382 Sequoiadendron giganteum HOM05D004676 ORTHO05D005661 3.3e-08 63.5 40 72.5
Cre09.g389652 Chlamydomonas reinhardtii HOM05D004676 ORTHO05D005661 1.3e-07 61.6 120 35.0


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