Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0064481 Rosa chinensis HOM05D024790 ORTHO05D025476 1.3e-24 115.9 73 100.0
FvH4_3g36030 Fragaria vesca HOM05D024790 ORTHO05D025476 9.5e-20 99.8 74 91.9
FAN16G3235 Fragaria x ananassa HOM05D024790 ORTHO05D025476 9.5e-20 99.8 74 91.9
FAN25G1725 Fragaria x ananassa HOM05D024790 ORTHO05D025476 8.0e-19 96.7 74 90.5
FAN21G1939 Fragaria x ananassa HOM05D024790 ORTHO05D025476 2.4e-15 85.1 74 82.4
Cfa011500 Carpinus fangiana HOM05D002160 ORTHO05D002012 2.1e-11 72.0 74 71.6
Haze_24095 Corylus avellana HOM05D002160 ORTHO05D002012 3.1e-10 68.2 74 68.9
Prupe.6G077900 Prunus persica HOM05D002160 ORTHO05D002012 6.8e-10 67.0 74 67.6
Potri.019G100001 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.7e-08 62.4 73 75.3
Prupe.6G077800 Prunus persica HOM05D002160 ORTHO05D002012 1.7e-08 62.4 77 64.9
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 3.7e-08 61.2 73 49.3
FAN21G3063 Fragaria x ananassa HOM05D015563 ORTHO05D002012 6.4e-08 60.5 74 63.5
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 8.3e-08 60.1 72 58.3
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.4e-07 59.3 55 63.6
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 3.2e-07 58.2 54 61.1
Potri.013G131200 Populus trichocarpa HOM05D002160 ORTHO05D002012 3.2e-07 58.2 73 72.6
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 3.2e-07 58.2 50 60.0
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 4.1e-07 57.8 71 53.5
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 9.2e-07 56.6 54 57.4
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.2e-06 56.2 55 56.4
CiPaw.13G094600 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.2e-06 56.2 57 56.1
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 2.0e-06 55.5 55 56.4
Potri.009G030800 Populus trichocarpa HOM05D002160 ORTHO05D002012 2.0e-06 55.5 56 57.1
Gohir.D11G345700 Gossypium hirsutum HOM05D002160 ORTHO05D002012 3.5e-06 54.7 75 52.0
Aqoxy2G02118 Aquilegia oxysepala HOM05D002160 ORTHO05D002012 4.6e-06 54.3 52 51.9
Potri.001G040200 Populus trichocarpa HOM05D002160 ORTHO05D002012 4.6e-06 54.3 73 71.2
Potri.001G041268 Populus trichocarpa HOM05D002160 ORTHO05D002012 4.6e-06 54.3 73 71.2
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 4.6e-06 54.3 54 55.6
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 6.0e-06 53.9 55 52.7
Haze_11621 Corylus avellana HOM05D002160 ORTHO05D002012 7.8e-06 53.5 54 59.3
Gorai.007G376000 Gossypium raimondii HOM05D002160 ORTHO05D002012 7.8e-06 53.5 75 50.7
MD03G1093800 Malus domestica HOM05D015563 ORTHO05D002012 7.8e-06 53.5 78 69.2
MD11G1109200 Malus domestica HOM05D015563 ORTHO05D002012 7.8e-06 53.5 78 67.9
MD11G1109300 Malus domestica HOM05D015563 ORTHO05D002012 7.8e-06 53.5 78 69.2
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 7.8e-06 53.5 82 53.7


User provided reference genes

Program Settings