Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0061221 Rosa chinensis HOM05D000012 ORTHO05D017217 1.7e-25 118.6 63 100.0
FvH4_3g33690 Fragaria vesca HOM05D000012 ORTHO05D003972 1.1e-16 89.4 60 80.0
FAN11G0886 Fragaria x ananassa HOM05D000012 ORTHO05D003972 1.1e-16 89.4 60 80.0
FAN21G1126 Fragaria x ananassa HOM05D000012 ORTHO05D003972 1.1e-16 89.4 60 80.0
FAN14G2705 Fragaria x ananassa HOM05D000012 ORTHO05D017217 5.5e-16 87.0 61 77.0
QL07p035998 Quercus lobata HOM05D000012 ORTHO05D003972 1.6e-12 75.5 58 58.6
QL07p035973 Quercus lobata HOM05D000012 ORTHO05D003972 1.4e-11 72.4 56 57.1
TAR636G0546 Trochodendron aralioides HOM05D000012 ORTHO05D003972 2.4e-11 71.6 57 61.4
QL07p035967 Quercus lobata HOM05D000012 ORTHO05D003972 4.1e-11 70.9 56 55.4
Prupe.6G272600 Prunus persica HOM05D000012 ORTHO05D003972 5.3e-11 70.5 55 58.2
Nn2g11409 Nelumbo nucifera HOM05D000012 ORTHO05D003972 6.9e-11 70.1 57 50.9
QL07p035993 Quercus lobata HOM05D000012 ORTHO05D003972 6.9e-11 70.1 56 55.4
CSS0027204 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D017217 1.5e-10 68.9 62 54.8
Dinv37071 Davidia involucrata HOM05D001221 ORTHO05D009285 1.5e-10 68.9 60 51.7
SalBow5G4030 Salvia bowleyana HOM05D000012 ORTHO05D003972 2.0e-10 68.6 59 54.2
FAN14G2604 Fragaria x ananassa HOM05D000012 ORTHO05D003972 4.5e-10 67.4 62 48.4
CSS0006532 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D017217 5.9e-10 67.0 62 53.2
FvH4_6g11890 Fragaria vesca HOM05D000012 ORTHO05D003972 5.9e-10 67.0 59 49.2
Prupe.6G272500 Prunus persica HOM05D000012 ORTHO05D003972 5.9e-10 67.0 54 57.4
CANSAT35G1359 Cannabis sativa HOM05D000012 ORTHO05D003972 1.3e-09 65.9 60 51.7
FAN25G1256 Fragaria x ananassa HOM05D000012 ORTHO05D003972 1.3e-09 65.9 42 83.3
Atru.chr8.2213 Acer truncatum HOM05D000012 ORTHO05D003972 1.7e-09 65.5 59 54.2
Actinidia01105 Actinidia chinensis HOM05D000012 ORTHO05D017217 1.7e-09 65.5 59 52.5
CSS0049811 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D017217 1.7e-09 65.5 62 50.0
CiPaw.10G155000 Carya illinoinensis HOM05D000012 ORTHO05D003972 1.7e-09 65.5 59 47.5
QL07p035978 Quercus lobata HOM05D000012 ORTHO05D003972 1.7e-09 65.5 56 51.8
Cc06_g01560 Coffea canephora HOM05D000012 ORTHO05D003972 2.2e-09 65.1 58 51.7
Lj2A78G30 Lonicera japonica HOM05D000012 ORTHO05D003972 2.2e-09 65.1 60 50.0
Migut.J00191 Erythranthe guttata HOM05D000012 ORTHO05D003972 3.8e-09 64.3 59 49.2
Ciclev10013488m.g Citrus clementina HOM05D000012 ORTHO05D003972 5.0e-09 63.9 59 50.8
Lj3A127T4 Lonicera japonica HOM05D000012 ORTHO05D003972 8.5e-09 63.2 60 48.3
FAN02G1045 Fragaria x ananassa HOM05D000012 ORTHO05D003972 1.1e-08 62.8 59 50.8
CANSAT35G1456 Cannabis sativa HOM05D000012 ORTHO05D003972 1.4e-08 62.4 58 50.0
Ciclev10013636m.g Citrus clementina HOM05D000012 ORTHO05D003972 1.4e-08 62.4 60 46.7
Haze_20965 Corylus avellana HOM05D000012 ORTHO05D003972 1.4e-08 62.4 59 49.2
Prupe.6G272400 Prunus persica HOM05D000012 ORTHO05D003972 1.4e-08 62.4 61 50.8
Duzib093G0916 Durio zibethinus HOM05D000012 ORTHO05D003972 4.2e-08 60.8 54 53.7
FvH4_6g11880 Fragaria vesca HOM05D000012 ORTHO05D003972 4.2e-08 60.8 59 47.5
FAN14G4999 Fragaria x ananassa HOM05D000012 ORTHO05D003972 4.2e-08 60.8 59 47.5
Cfa013509 Carpinus fangiana HOM05D000012 ORTHO05D003972 7.2e-08 60.1 54 53.7
MD04G1148300 Malus domestica HOM05D000012 ORTHO05D003972 7.2e-08 60.1 54 46.3
Oeu030521.1 Olea europaea HOM05D000012 ORTHO05D003972 7.2e-08 60.1 60 48.3
Actinidia01104 Actinidia chinensis HOM05D000012 ORTHO05D003972 2.7e-07 58.2 59 45.8
Cc11_g10430 Coffea canephora HOM05D000012 ORTHO05D003972 3.6e-07 57.8 60 48.3
HanXRQChr08g0220531 Helianthus annuus HOM05D000012 ORTHO05D003972 3.6e-07 57.8 60 43.3
Lsat_1_v5_gn_2_3761 Lactuca sativa HOM05D000012 ORTHO05D003972 3.6e-07 57.8 60 45.0
Migut.J00197 Erythranthe guttata HOM05D000012 ORTHO05D003972 4.6e-07 57.4 55 49.1
BcaC02g11953 Brassica carinata HOM05D000012 ORTHO05D003972 7.9e-07 56.6 56 51.8
BolC4t22566H Brassica oleracea HOM05D000012 ORTHO05D003972 7.9e-07 56.6 56 51.8
unitig_8.g3230 Utricularia gibba HOM05D007005 ORTHO05D008799 7.9e-07 56.6 60 48.3
EL10Ac8g20188 Beta vulgaris HOM05D000012 ORTHO05D003972 1.0e-06 56.2 57 42.1
Migut.J00198 Erythranthe guttata HOM05D000012 ORTHO05D003972 1.8e-06 55.5 57 47.4
SalBow5G4197 Salvia bowleyana HOM05D000012 ORTHO05D003972 2.3e-06 55.1 57 47.4
SalBow5G5134 Salvia bowleyana HOM05D000012 ORTHO05D003972 2.3e-06 55.1 57 47.4
SGA_v2.0_scaffold85G26754 Striga asiatica HOM05D001221 ORTHO05D009285 2.3e-06 55.1 57 45.6
THA.LOC104806521 Tarenaya hassleriana HOM05D000012 ORTHO05D003972 2.3e-06 55.1 57 47.4
A05p07940 Brassica napus HOM05D000012 ORTHO05D003972 3.0e-06 54.7 56 50.0
BraA05t19759Z Brassica rapa HOM05D000012 ORTHO05D003972 3.0e-06 54.7 56 50.0
Lsat_1_v5_gn_8_99941 Lactuca sativa HOM05D000012 ORTHO05D003972 3.0e-06 54.7 60 40.0
Carub.0004s2007 Capsella rubella HOM05D000012 ORTHO05D003972 3.9e-06 54.3 56 50.0
Cpa.g.sc163.8 Carica papaya HOM05D000012 ORTHO05D003972 3.9e-06 54.3 55 43.6
Cfa017238 Carpinus fangiana HOM05D000012 ORTHO05D003972 3.9e-06 54.3 56 48.2
Sp4g20420 Schrenkiella parvula HOM05D000012 ORTHO05D003972 3.9e-06 54.3 56 50.0
AT2G38100 Arabidopsis thaliana HOM05D000012 ORTHO05D003972 5.1e-06 53.9 56 48.2
DCAR_018721 Daucus carota HOM05D000012 ORTHO05D003972 5.1e-06 53.9 60 41.7
Thhalv10016530m.g Eutrema salsugineum HOM05D000012 ORTHO05D003972 5.1e-06 53.9 56 48.2
BcaB02g09218 Brassica carinata HOM05D000012 ORTHO05D003972 6.7e-06 53.5 56 48.2
CANSAT35G0460 Cannabis sativa HOM05D000012 ORTHO05D003972 6.7e-06 53.5 56 42.9
AUR62021861 Chenopodium quinoa HOM05D000012 ORTHO05D003972 6.7e-06 53.5 57 38.6


User provided reference genes

Program Settings