Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0059301 Rosa chinensis HOM05D000007 ORTHO05D035417 1.1e-46 189.5 89 100.0
RcHm_v2.0_Chr5g0059211 Rosa chinensis HOM05D000007 ORTHO05D000017 1.5e-22 109.4 88 59.1
RcHm_v2.0_Chr5g0059551 Rosa chinensis HOM05D000007 ORTHO05D000017 5.9e-16 87.4 87 54.0
RcHm_v2.0_Chr5g0059291 Rosa chinensis HOM05D000007 ORTHO05D000017 3.8e-15 84.7 91 51.6
RcHm_v2.0_Chr5g0081341 Rosa chinensis HOM05D000007 ORTHO05D000017 3.8e-15 84.7 87 55.2
RcHm_v2.0_Chr5g0059321 Rosa chinensis HOM05D000007 ORTHO05D035417 5.0e-15 84.3 90 51.1
FvH4_3g32350 Fragaria vesca HOM05D000007 ORTHO05D000017 9.5e-14 80.1 91 50.5
RcHm_v2.0_Chr5g0059201 Rosa chinensis HOM05D000007 ORTHO05D000017 1.6e-13 79.3 93 52.7
RcHm_v2.0_Chr5g0059111 Rosa chinensis HOM05D000007 ORTHO05D000017 2.1e-13 79.0 92 52.2
FAN16G0155 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.6e-13 78.2 88 52.3
FAN26G1843 Fragaria x ananassa HOM05D000001 ORTHO05D009432 3.6e-13 78.2 87 47.1
FvH4_1g18470 Fragaria vesca HOM05D000007 ORTHO05D000017 4.7e-13 77.8 87 47.1
FvH4_3g32390 Fragaria vesca HOM05D000007 ORTHO05D035417 1.8e-12 75.9 90 48.9
RcHm_v2.0_Chr5g0053901 Rosa chinensis HOM05D000007 ORTHO05D000017 1.8e-12 75.9 92 50.0
RcHm_v2.0_Chr2g0107881 Rosa chinensis HOM05D000007 ORTHO05D000017 4.0e-12 74.7 86 48.8
FvH4_3g01100 Fragaria vesca HOM05D000007 ORTHO05D000017 1.5e-11 72.8 88 47.7
FAN25G2493 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.5e-11 72.8 86 48.8
RcHm_v2.0_Chr2g0101031 Rosa chinensis HOM05D000007 ORTHO05D000017 4.4e-11 71.2 89 43.8
FvH4_3g44660 Fragaria vesca HOM05D000007 ORTHO05D000017 5.7e-11 70.9 88 48.9
FvH4_2g36711 Fragaria vesca HOM05D000007 ORTHO05D000017 9.8e-11 70.1 93 45.2
FAN25G2917 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.3e-10 69.7 88 48.9
FAN15G1356 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.3e-10 67.4 93 44.1
FAN27G2044 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.3e-10 67.4 93 44.1
RcHm_v2.0_Chr2g0107851 Rosa chinensis HOM05D000007 ORTHO05D000017 6.3e-10 67.4 86 45.3
FvH4_3g45161 Fragaria vesca HOM05D000007 ORTHO05D000017 8.3e-10 67.0 88 44.3
RcHm_v2.0_Chr2g0107811 Rosa chinensis HOM05D000007 ORTHO05D000017 2.4e-09 65.5 86 44.2
FvH4_2g36710 Fragaria vesca HOM05D000007 ORTHO05D000017 3.1e-09 65.1 93 43.0
FAN20G2365 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.4e-09 64.3 89 44.9
RcHm_v2.0_Chr2g0107801 Rosa chinensis HOM05D000007 ORTHO05D000017 5.4e-09 64.3 89 46.1
FvH4_1g17550 Fragaria vesca HOM05D000007 ORTHO05D000017 9.2e-09 63.5 86 44.2
FvH4_6g14993 Fragaria vesca HOM05D000007 ORTHO05D000017 1.6e-08 62.8 89 41.6
FAN21G0670 Fragaria x ananassa HOM05D000870 ORTHO05D000715 2.7e-08 62.0 73 49.3
RcHm_v2.0_Chr3g0475411 Rosa chinensis HOM05D000007 ORTHO05D000017 2.7e-08 62.0 95 45.3
FvH4_3g44560 Fragaria vesca HOM05D000007 ORTHO05D000017 3.5e-08 61.6 69 49.3
FvH4_3g44671 Fragaria vesca HOM05D000007 ORTHO05D000017 4.5e-08 61.2 63 52.4
FAN05G2368 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.9e-08 60.8 89 39.3
FAN27G1786 Fragaria x ananassa HOM05D000007 ORTHO05D029656 7.8e-08 60.5 89 43.8
FvH4_2g36701 Fragaria vesca HOM05D000007 ORTHO05D000017 1.0e-07 60.1 89 47.2
FAN14G5209 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.3e-07 59.7 84 41.7
FvH4_1g18391 Fragaria vesca HOM05D000007 ORTHO05D000017 1.7e-07 59.3 79 40.5
FvH4_1g13860 Fragaria vesca HOM05D000007 ORTHO05D000017 2.3e-07 58.9 91 38.5
RcHm_v2.0_Chr2g0107891 Rosa chinensis HOM05D000007 ORTHO05D000017 2.3e-07 58.9 87 46.0
FAN19G2319 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.9e-07 58.5 85 42.4
RcHm_v2.0_Chr7g0211081 Rosa chinensis HOM05D000007 ORTHO05D000017 3.9e-07 58.2 87 43.7
FvH4_1g18430 Fragaria vesca HOM05D000007 ORTHO05D000017 5.0e-07 57.8 80 41.2
RcHm_v2.0_Chr2g0086031 Rosa chinensis HOM05D000007 ORTHO05D013322 6.6e-07 57.4 89 34.8
FAN14G3180 Fragaria x ananassa HOM05D000007 ORTHO05D000017 8.6e-07 57.0 87 37.9
FAN23G2354 Fragaria x ananassa HOM05D000007 ORTHO05D029656 8.6e-07 57.0 88 40.9
FvH4_1g17570 Fragaria vesca HOM05D000007 ORTHO05D000017 1.1e-06 56.6 88 35.2
FAN09G0908 Fragaria x ananassa HOM05D000082 ORTHO05D009107 1.1e-06 56.6 92 41.3
FAN15G3234 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.9e-06 55.8 86 44.2
FAN19G3196 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.9e-06 55.8 87 37.9
FAN23G2883 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.9e-06 55.8 87 36.8
RcHm_v2.0_Chr2g0122651 Rosa chinensis HOM05D000007 ORTHO05D013322 1.9e-06 55.8 91 37.4
FvH4_6g14972 Fragaria vesca HOM05D000007 ORTHO05D000017 3.3e-06 55.1 87 36.8
FvH4_1g13820 Fragaria vesca HOM05D005839 ORTHO05D005686 4.3e-06 54.7 96 32.3
FvH4_6g14980 Fragaria vesca HOM05D000007 ORTHO05D000017 4.3e-06 54.7 92 38.0
FAN26G2312 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.6e-06 54.3 96 39.6
FAN23G0995 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.3e-06 53.9 86 40.7
RcHm_v2.0_Chr2g0107841 Rosa chinensis HOM05D000007 ORTHO05D000017 7.3e-06 53.9 93 39.8
FAN04G1848 Fragaria x ananassa HOM05D000007 ORTHO05D011902 9.5e-06 53.5 90 41.1


User provided reference genes

Program Settings