Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0057831 Rosa chinensis HOM05D007861 ORTHO05D007271 2.5e-50 201.8 103 100.0
FvH4_3g31180 Fragaria vesca HOM05D007861 ORTHO05D007271 7.5e-47 190.3 103 94.2
FAN11G3777 Fragaria x ananassa HOM05D007861 ORTHO05D007271 7.5e-47 190.3 103 94.2
FAN25G1997 Fragaria x ananassa HOM05D007861 ORTHO05D007271 7.5e-47 190.3 103 94.2
FAN21G2212 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.4e-45 186.0 103 92.2
FAN16G3504 Fragaria x ananassa HOM05D007861 ORTHO05D007271 2.7e-44 181.8 103 91.3
Prupe.6G107700 Prunus persica HOM05D007861 ORTHO05D007271 2.3e-32 142.1 107 72.0
Cfa010349 Carpinus fangiana HOM05D007861 ORTHO05D007271 3.0e-19 98.6 84 61.9
Haze_23757 Corylus avellana HOM05D007861 ORTHO05D007271 5.6e-18 94.4 107 51.4
CiPaw.13G118000 Carya illinoinensis HOM05D007861 ORTHO05D007271 9.6e-18 93.6 99 54.5
CiPaw.14G086500 Carya illinoinensis HOM05D007861 ORTHO05D007271 8.1e-17 90.5 101 52.5
Lalb_Chr24g0394821 Lupinus albus HOM05D007861 ORTHO05D007271 1.1e-16 90.1 102 51.0
Lalb_Chr14g0374511 Lupinus albus HOM05D007861 ORTHO05D007271 1.4e-16 89.7 99 50.5
Lj3g0021425 Lotus japonicus HOM05D007861 ORTHO05D007271 1.8e-16 89.4 109 51.4
Atru.chr3.3557 Acer truncatum HOM05D007861 ORTHO05D007271 3.1e-16 88.6 106 52.8
CsaV3_6G014180 Cucumis sativus L. HOM05D007861 ORTHO05D007271 9.0e-16 87.0 106 50.0
arahy.Tifrunner.gnm1.ann1.ALS1H8 Arachis hypogaea HOM05D007861 ORTHO05D007271 1.2e-15 86.7 99 56.6
Ciclev10029681m.g Citrus clementina HOM05D007861 ORTHO05D007271 1.5e-15 86.3 85 61.2
Lj3g0027314 Lotus japonicus HOM05D007861 ORTHO05D007271 1.5e-15 86.3 109 48.6
Phvul.005G132100 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 1.5e-15 86.3 100 51.0
Lalb_Chr01g0004491 Lupinus albus HOM05D007861 ORTHO05D007271 7.6e-15 84.0 108 47.2
Medtr4g057830 Medicago truncatula HOM05D007861 ORTHO05D007271 1.3e-14 83.2 81 58.0
Glyma.12G177000 Glycine max HOM05D007861 ORTHO05D007271 1.7e-14 82.8 108 51.9
MELO3C026916.2 Cucumis melo HOM05D007861 ORTHO05D007271 3.8e-14 81.6 99 48.5
Glyma.13G323700 Glycine max HOM05D007861 ORTHO05D007271 4.9e-14 81.3 102 51.0
TPR.G6167 Trifolium pratense HOM05D007861 ORTHO05D007271 4.9e-14 81.3 115 45.2
Glyma.11G195000 Glycine max HOM05D007861 ORTHO05D007271 8.4e-14 80.5 108 46.3
Medtr2g095310 Medicago truncatula HOM05D007861 ORTHO05D007271 8.4e-14 80.5 109 50.5
Sed0017526 Sechium edule HOM05D007861 ORTHO05D007271 8.4e-14 80.5 98 50.0
Manes.11G150200 Manihot esculenta HOM05D007861 ORTHO05D007271 1.1e-13 80.1 106 47.2
ClCG02G021400 Citrullus lanatus HOM05D007861 ORTHO05D007271 1.9e-13 79.3 73 57.5
Glyma.12G079100 Glycine max HOM05D007861 ORTHO05D007271 4.2e-13 78.2 107 44.9
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 7.1e-13 77.4 108 47.2
Gohir.D08G217100 Gossypium hirsutum HOM05D007861 ORTHO05D007271 9.3e-13 77.0 104 50.0
Phvul.011G083700 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 1.2e-12 76.6 107 45.8
TPR.G11489 Trifolium pratense HOM05D007861 ORTHO05D007271 1.2e-12 76.6 100 51.0
Gohir.A05G106400 Gossypium hirsutum HOM05D007861 ORTHO05D007271 1.6e-12 76.3 94 52.1
VMungo1127G1395 Vigna mungo HOM05D007861 ORTHO05D007271 1.6e-12 76.3 93 49.5
DCAR_018786 Daucus carota HOM05D007861 ORTHO05D007271 2.1e-12 75.9 82 47.6
Thecc.09G347700 Theobroma cacao HOM05D007861 ORTHO05D007271 4.6e-12 74.7 108 48.1
Gorai.004G230800 Gossypium raimondii HOM05D007861 ORTHO05D007271 7.8e-12 73.9 104 49.0
Gohir.A08G200000 Gossypium hirsutum HOM05D007861 ORTHO05D007271 1.3e-11 73.2 104 48.1
Gohir.D05G106401 Gossypium hirsutum HOM05D007861 ORTHO05D007271 1.7e-11 72.8 101 49.5
Gorai.009G110500 Gossypium raimondii HOM05D007861 ORTHO05D007271 1.7e-11 72.8 101 49.5
Lalb_Chr03g0027611 Lupinus albus HOM05D007861 ORTHO05D007271 1.7e-11 72.8 99 44.4
COL.COLO4_34705 Corchorus olitorius HOM05D007861 ORTHO05D007271 3.0e-11 72.0 100 48.0
Potri.004G213900 Populus trichocarpa HOM05D007861 ORTHO05D007271 3.0e-11 72.0 93 47.3
Sabra04G0145100 Salix brachista HOM05D007861 ORTHO05D007271 8.7e-11 70.5 69 55.1
Sed0005749 Sechium edule HOM05D007861 ORTHO05D007271 8.7e-11 70.5 98 44.9
MSTRG.21100 Avicennia marina HOM05D007861 ORTHO05D007271 1.1e-10 70.1 107 44.9
Potri.009G008300 Populus trichocarpa HOM05D007861 ORTHO05D007271 1.5e-10 69.7 105 42.9
Migut.N02575 Erythranthe guttata HOM05D007861 ORTHO05D007271 1.9e-10 69.3 108 43.5
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 2.5e-10 68.9 101 39.6
Manes.04G015900 Manihot esculenta HOM05D007861 ORTHO05D007271 3.3e-10 68.6 106 45.3
Sabra09G0004800 Salix brachista HOM05D007861 ORTHO05D007271 4.3e-10 68.2 93 44.1
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 4.8e-09 64.7 103 39.8
PGSC0003DMG400019683 Solanum tuberosum HOM05D007861 ORTHO05D007271 3.1e-08 62.0 56 53.6
Sopen06g031390 Solanum pennellii HOM05D039995 ORTHO05D007271 4.0e-08 61.6 105 37.1
Cpa.g.sc65.32 Carica papaya HOM05D007861 ORTHO05D007271 6.9e-08 60.8 99 46.5
Hma1.2p1_0569F.1_g180260 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 3.4e-07 58.5 69 44.9
Aqoxy1G01166 Aquilegia oxysepala HOM05D007861 ORTHO05D007271 4.5e-07 58.2 94 38.3
CSS0012629 Camellia sinensis var. sinensis HOM05D007861 ORTHO05D007271 5.8e-07 57.8 111 40.5
Migut.D02257 Erythranthe guttata HOM05D007861 ORTHO05D007271 5.8e-07 57.8 78 43.6
Hma1.2p1_0344F.1_g131140 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 9.9e-07 57.0 85 44.7
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 9.9e-07 57.0 108 37.0
Psat6g181720 Pisum sativum HOM05D007861 ORTHO05D007271 1.7e-06 56.2 60 43.3
Potri.010G226200 Populus trichocarpa HOM05D007861 ORTHO05D007271 1.7e-06 56.2 109 33.9
Lsat_1_v5_gn_6_43600 Lactuca sativa HOM05D007861 ORTHO05D007271 2.2e-06 55.8 53 50.9
BcaB06g28183 Brassica carinata HOM05D014739 ORTHO05D007271 3.8e-06 55.1 76 44.7
Sabra10G0174600 Salix brachista HOM05D007861 ORTHO05D007271 3.8e-06 55.1 107 35.5
BraA04t17695Z Brassica rapa HOM05D014739 ORTHO05D007271 4.9e-06 54.7 101 41.6
Carub.0004s0882 Capsella rubella HOM05D014739 ORTHO05D007271 8.4e-06 53.9 93 40.9
Sp4g10850 Schrenkiella parvula HOM05D014739 ORTHO05D007271 8.4e-06 53.9 59 50.8


User provided reference genes

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