Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0051181 Rosa chinensis HOM05D000107 ORTHO05D003213 4.5e-77 291.2 149 100.0
Atru.chr1.1625 Acer truncatum HOM05D000107 ORTHO05D000062 5.4e-22 108.2 137 54.0
Atru.chr11.780 Acer truncatum HOM05D000107 ORTHO05D000062 3.5e-21 105.5 137 53.3
Atru.chr2.1893 Acer truncatum HOM05D000107 ORTHO05D000062 1.0e-20 104.0 137 50.4
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 1.0e-20 104.0 137 48.9
Atru.chr4.799 Acer truncatum HOM05D000107 ORTHO05D000062 1.0e-20 104.0 137 52.6
FvH4_7g03653 Fragaria vesca HOM05D000107 ORTHO05D000062 3.0e-20 102.4 137 46.0
Atru.chr2.1683 Acer truncatum HOM05D000107 ORTHO05D000062 3.9e-20 102.1 137 51.1
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 6.6e-20 101.3 137 49.6
Atru.chr1.497 Acer truncatum HOM05D000107 ORTHO05D000062 5.3e-17 91.7 139 40.3
Atru.chr5.1751 Acer truncatum HOM05D000107 ORTHO05D000062 5.3e-17 91.7 139 40.3
Atru.chr11.622 Acer truncatum HOM05D000107 ORTHO05D000062 2.9e-15 85.9 121 41.3
Prupe.2G062700 Prunus persica HOM05D000107 ORTHO05D003213 1.9e-14 83.2 85 50.6
Atru.chr2.2656 Acer truncatum HOM05D000107 ORTHO05D000062 3.5e-13 79.0 122 50.8
QL09p027832 Quercus lobata HOM05D000107 ORTHO05D000062 1.9e-11 73.2 144 35.4
QL05p061366 Quercus lobata HOM05D000107 ORTHO05D000062 4.3e-11 72.0 144 42.4
Aqoxy1G03594 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 5.6e-11 71.6 77 40.3
Aqoxy1G04143 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 5.6e-11 71.6 77 40.3
Aqoxy4G01545 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 5.6e-11 71.6 77 40.3
Aqoxy2G01329 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 9.6e-11 70.9 77 40.3
Prupe.7G022900 Prunus persica HOM05D000107 ORTHO05D000062 9.6e-11 70.9 135 48.9
TAR344G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.3e-10 70.5 139 35.3
PSO210G7421 Papaver somniferum HOM05D000107 ORTHO05D000062 2.4e-09 66.2 77 35.1
TAR230G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 2.4e-09 66.2 136 33.1
Ciclev10003577m.g Citrus clementina HOM05D000107 ORTHO05D000062 5.3e-09 65.1 136 35.3
PSO170G6916 Papaver somniferum HOM05D000107 ORTHO05D000062 5.3e-09 65.1 148 29.1
PSO384G4667 Papaver somniferum HOM05D000107 ORTHO05D000062 5.3e-09 65.1 77 33.8
PSO801G0365 Papaver somniferum HOM05D000107 ORTHO05D000062 5.3e-09 65.1 77 35.1
Rhsim01G0188000 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-09 65.1 77 40.3
FAN18G1993 Fragaria x ananassa HOM05D009580 ORTHO05D008963 1.2e-08 63.9 80 37.5
EL10Ac8g19688 Beta vulgaris HOM05D000107 ORTHO05D003213 1.5e-08 63.5 145 27.6
PSO017G0022 Papaver somniferum HOM05D000107 ORTHO05D000062 1.5e-08 63.5 77 33.8
Rhsim01G0178900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-08 63.5 77 41.6
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-08 63.5 166 27.7
Rhsim11G0143900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-08 63.5 77 40.3
PSO541G1414 Papaver somniferum HOM05D000107 ORTHO05D000062 2.0e-08 63.2 77 33.8
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 3.4e-08 62.4 154 28.6
Aqoxy7G02816 Aquilegia oxysepala HOM05D000107 ORTHO05D003213 4.5e-08 62.0 77 45.5
Lj1E510T0 Lonicera japonica HOM05D000107 ORTHO05D003213 4.5e-08 62.0 82 37.8
Peaxi162Scf00106g00075 Petunia axillaris HOM05D000107 ORTHO05D003213 4.5e-08 62.0 78 35.9
TWI81G0886 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.5e-08 62.0 142 26.8
EL10Ac4g08668 Beta vulgaris HOM05D000107 ORTHO05D000062 5.8e-08 61.6 142 27.5
ECA236G3668 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.8e-08 61.6 75 38.7
PSO198G0028 Papaver somniferum HOM05D000107 ORTHO05D000062 5.8e-08 61.6 85 37.6
TWI34G0305 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.8e-08 61.6 145 28.3
PSO135G0384 Papaver somniferum HOM05D000107 ORTHO05D000062 9.9e-08 60.8 87 34.5
PSO210G7322 Papaver somniferum HOM05D000107 ORTHO05D000062 9.9e-08 60.8 78 35.9
Aqoxy2G02175 Aquilegia oxysepala HOM05D000107 ORTHO05D003213 1.3e-07 60.5 77 44.2
QL04p020321 Quercus lobata HOM05D000315 ORTHO05D000062 1.3e-07 60.5 151 35.8
FAN13G2019 Fragaria x ananassa HOM05D000107 ORTHO05D000062 1.7e-07 60.1 31 87.1
Rhsim09G0096400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-07 60.1 134 28.4
TWI38G1944 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.7e-07 60.1 147 26.5
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 2.2e-07 59.7 138 30.4
PSO135G0675 Papaver somniferum HOM05D000107 ORTHO05D000062 2.2e-07 59.7 85 36.5
AUR62035502 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.9e-07 59.3 77 39.0
PSO675G1522 Papaver somniferum HOM05D000107 ORTHO05D000062 2.9e-07 59.3 75 33.3
PSO832G2343 Papaver somniferum HOM05D000107 ORTHO05D000062 2.9e-07 59.3 75 33.3
Aqoxy1G03105 Aquilegia oxysepala HOM05D000107 ORTHO05D003213 3.8e-07 58.9 85 40.0
CANSAT64G0354 Cannabis sativa HOM05D000107 ORTHO05D003213 3.8e-07 58.9 80 42.5
PSO384G1138 Papaver somniferum HOM05D000107 ORTHO05D000062 3.8e-07 58.9 76 34.2
TWI59G1300 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.8e-07 58.9 149 28.2
Aqoxy3G01266 Aquilegia oxysepala HOM05D000025 ORTHO05D003213 4.9e-07 58.5 77 42.9
EL10Ac2g03082 Beta vulgaris HOM05D000107 ORTHO05D003213 4.9e-07 58.5 76 35.5
CANSAT64G1673 Cannabis sativa HOM05D000107 ORTHO05D000062 4.9e-07 58.5 149 28.9
CANSAT64G2733 Cannabis sativa HOM05D000107 ORTHO05D000062 4.9e-07 58.5 149 28.9
PSO063G1379 Papaver somniferum HOM05D000107 ORTHO05D000062 4.9e-07 58.5 85 35.3
PSO357G0447 Papaver somniferum HOM05D000107 ORTHO05D000062 4.9e-07 58.5 79 31.6
PSO017G5997 Papaver somniferum HOM05D000107 ORTHO05D000062 6.4e-07 58.2 76 34.2
PSO478G1106 Papaver somniferum HOM05D000107 ORTHO05D000062 6.4e-07 58.2 76 34.2
PSO724G1337 Papaver somniferum HOM05D000107 ORTHO05D000062 6.4e-07 58.2 76 34.2
PSO170G2967 Papaver somniferum HOM05D000107 ORTHO05D000062 8.4e-07 57.8 76 34.2
PSO170G3239 Papaver somniferum HOM05D000107 ORTHO05D000062 8.4e-07 57.8 76 34.2
PSO409G0030 Papaver somniferum HOM05D000107 ORTHO05D000062 8.4e-07 57.8 76 34.2
PSO566G0169 Papaver somniferum HOM05D000107 ORTHO05D000062 8.4e-07 57.8 91 36.3
PSO782G4174 Papaver somniferum HOM05D000107 ORTHO05D000062 8.4e-07 57.8 76 34.2
Peaxi162Scf01029g00034 Petunia axillaris HOM05D002954 ORTHO05D003213 8.4e-07 57.8 81 39.5
PSO017G0018 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO017G3036 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO017G3574 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO017G4888 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO063G6357 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO170G2938 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO170G5037 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO210G4007 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO210G7634 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO339G1393 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO339G1437 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO339G2651 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO339G6051 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO384G2035 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO384G3206 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO421G0292 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO423G0095 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO541G0665 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 141 28.4
PSO541G4511 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO675G2751 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO675G7509 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO675G7986 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO724G0904 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO781G0202 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO801G0277 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 77 32.5
PSO832G4110 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO832G4442 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 85 35.3
PSO017G4918 Papaver somniferum HOM05D000107 ORTHO05D000062 1.4e-06 57.0 71 38.0
PSO384G2963 Papaver somniferum HOM05D000107 ORTHO05D000062 1.4e-06 57.0 85 34.1
PSO782G0564 Papaver somniferum HOM05D000107 ORTHO05D000062 1.4e-06 57.0 76 34.2
Psat0s4310g0040 Pisum sativum HOM05D000107 ORTHO05D031396 1.4e-06 57.0 77 36.4
Psat1g138160 Pisum sativum HOM05D000107 ORTHO05D000062 1.4e-06 57.0 77 36.4
PSO210G2589 Papaver somniferum HOM05D000107 ORTHO05D000062 1.9e-06 56.6 76 32.9
PSO455G0051 Papaver somniferum HOM05D000107 ORTHO05D000062 1.9e-06 56.6 76 34.2
PSO781G0225 Papaver somniferum HOM05D000107 ORTHO05D000062 1.9e-06 56.6 91 36.3
PSO782G1754 Papaver somniferum HOM05D000107 ORTHO05D000062 1.9e-06 56.6 76 32.9
Aqoxy2G01704 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 2.4e-06 56.2 76 40.8
AUR62040877 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.4e-06 56.2 145 27.6
PSO210G2525 Papaver somniferum HOM05D000107 ORTHO05D000062 2.4e-06 56.2 76 32.9
PSO675G0159 Papaver somniferum HOM05D000107 ORTHO05D000062 2.4e-06 56.2 85 35.3
PSO675G4110 Papaver somniferum HOM05D000107 ORTHO05D000062 2.4e-06 56.2 76 34.2
Rhsim02G0154800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-06 56.2 77 36.4
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 3.2e-06 55.8 78 35.9
PSO170G4271 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-06 55.8 76 32.9
PSO732G0408 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-06 55.8 76 31.6
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 3.2e-06 55.8 82 34.1
PSO210G3633 Papaver somniferum HOM05D000107 ORTHO05D000062 4.2e-06 55.5 80 31.2
PSO675G7458 Papaver somniferum HOM05D000107 ORTHO05D000062 4.2e-06 55.5 91 36.3
PSO210G7686 Papaver somniferum HOM05D000107 ORTHO05D000062 5.5e-06 55.1 76 31.6
PSO339G6471 Papaver somniferum HOM05D000107 ORTHO05D000062 5.5e-06 55.1 91 35.2
PSO478G4396 Papaver somniferum HOM05D000107 ORTHO05D000062 5.5e-06 55.1 85 34.1
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 7.1e-06 54.7 76 40.8
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 7.1e-06 54.7 125 32.8
FAN10G1803 Fragaria x ananassa HOM05D009200 ORTHO05D010964 7.1e-06 54.7 26 84.6
PSO104G0066 Papaver somniferum HOM05D000107 ORTHO05D000062 7.1e-06 54.7 74 36.5
PSO675G7728 Papaver somniferum HOM05D000107 ORTHO05D000062 7.1e-06 54.7 141 27.7
TWI23G1198 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.1e-06 54.7 116 30.2
MBI13_g16081_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 9.3e-06 54.3 76 30.3
PSO832G4210 Papaver somniferum HOM05D000107 ORTHO05D000062 9.3e-06 54.3 70 37.1


User provided reference genes

Program Settings