Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0050231 Rosa chinensis HOM05D002956 ORTHO05D008031 5.7e-18 93.2 47 100.0
FAN16G1792 Fragaria x ananassa HOM05D002956 ORTHO05D008031 4.4e-10 67.0 41 80.5
FvH4_3g28160 Fragaria vesca HOM05D002956 ORTHO05D008031 3.7e-09 63.9 41 78.0
PGR119G0612 Punica granatum HOM05D002956 ORTHO05D008031 8.3e-09 62.8 40 72.5
Prupe.4G260400 Prunus persica HOM05D002956 ORTHO05D008031 1.1e-08 62.4 40 77.5
FAN25G0087 Fragaria x ananassa HOM05D002956 ORTHO05D008031 4.1e-08 60.5 36 77.8
MD00G1134700 Malus domestica HOM05D002956 ORTHO05D008031 5.4e-08 60.1 38 78.9
Dinv36148 Davidia involucrata HOM05D002956 ORTHO05D008031 9.1e-08 59.3 38 68.4
Haze_23261 Corylus avellana HOM05D002956 ORTHO05D008031 1.6e-07 58.5 40 67.5
Ciclev10018203m.g Citrus clementina HOM05D002956 ORTHO05D008031 2.7e-07 57.8 38 68.4
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 3.5e-07 57.4 40 65.0
arahy.Tifrunner.gnm1.ann1.XLU01S Arachis hypogaea HOM05D002956 ORTHO05D008031 7.7e-07 56.2 40 57.5
Manes.02G137300 Manihot esculenta HOM05D002956 ORTHO05D008031 7.7e-07 56.2 40 57.5
Eucgr.J00675 Eucalyptus grandis HOM05D002956 ORTHO05D008031 1.0e-06 55.8 41 68.3
arahy.Tifrunner.gnm1.ann1.1Z9FJQ Arachis hypogaea HOM05D002956 ORTHO05D008031 1.7e-06 55.1 43 53.5
Gohir.D07G125600 Gossypium hirsutum HOM05D002956 ORTHO05D008031 1.7e-06 55.1 40 62.5
Lj2C795T0 Lonicera japonica HOM05D002956 ORTHO05D008031 1.7e-06 55.1 41 58.5
GSVIVG01037340001 Vitis vinifera HOM05D002956 ORTHO05D008031 1.7e-06 55.1 40 57.5
CDE04G0360 Ceratophyllum demersum HOM05D002956 ORTHO05D008031 2.2e-06 54.7 40 62.5
TPR.G11875 Trifolium pratense HOM05D002757 ORTHO05D008031 2.2e-06 54.7 40 55.0
TWI31G0384 Tripterygium wilfordii HOM05D002956 ORTHO05D008031 2.2e-06 54.7 38 63.2
Aa31LG5G8970 Aethionema arabicum HOM05D002956 ORTHO05D008031 2.9e-06 54.3 40 60.0
CSS0006448 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D008031 2.9e-06 54.3 38 63.2
Duzib150G0193 Durio zibethinus HOM05D002956 ORTHO05D008031 2.9e-06 54.3 40 60.0
Rhsim13G0206100 Rhododendron simsii HOM05D002956 ORTHO05D008031 2.9e-06 54.3 40 57.5
Sed0014482 Sechium edule HOM05D002956 ORTHO05D008031 2.9e-06 54.3 38 57.9
vmacro04047 Vaccinium macrocarpon HOM05D002956 ORTHO05D008031 2.9e-06 54.3 40 57.5
Cc01_g06320 Coffea canephora HOM05D002956 ORTHO05D008031 3.8e-06 53.9 40 60.0
QL01p016670 Quercus lobata HOM05D002956 ORTHO05D008031 3.8e-06 53.9 40 65.0
Hund07424 Selenicereus undatus HOM05D002956 ORTHO05D008031 3.8e-06 53.9 40 60.0
Actinidia06980 Actinidia chinensis HOM05D002956 ORTHO05D008031 5.0e-06 53.5 40 57.5
Lalb_Chr15g0078511 Lupinus albus HOM05D002956 ORTHO05D008031 5.0e-06 53.5 40 52.5
MBI19_g19211_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D008031 5.0e-06 53.5 40 57.5
CARHR118990 Cardamine hirsuta HOM05D002956 ORTHO05D008031 6.5e-06 53.1 40 57.5
Aqoxy2G00442 Aquilegia oxysepala HOM05D002956 ORTHO05D008031 8.5e-06 52.8 40 55.0
Nn7g36838 Nelumbo nucifera HOM05D002956 ORTHO05D008031 8.5e-06 52.8 38 63.2


User provided reference genes

Program Settings