Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 9.5e-231 803.1 401 100.0
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.2e-185 653.3 394 86.3
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.1e-185 652.5 394 86.5
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 4.3e-183 644.8 356 91.3
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.3e-183 644.8 356 91.3
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 4.6e-177 624.8 398 80.2
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 2.3e-176 622.5 401 81.5
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 2.5e-175 619.0 396 79.0
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.8e-174 615.5 395 78.2
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 3.4e-172 608.6 395 77.7
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.0e-171 607.1 394 78.2
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.6e-169 599.7 391 76.5
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 4.7e-169 598.2 387 77.8
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 8.8e-168 594.0 398 76.4
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.6e-167 592.4 391 76.0
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 4.4e-167 591.7 398 74.9
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 5.7e-167 591.3 372 80.9
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 5.7e-167 591.3 394 76.9
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 9.7e-167 590.5 392 76.5
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 1.3e-166 590.1 390 76.2
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 3.7e-166 588.6 372 77.4
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 3.7e-166 588.6 400 75.0
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 6.3e-166 587.8 392 75.0
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.1e-165 587.0 383 77.0
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.1e-165 587.0 372 79.3
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.1e-165 587.0 384 75.8
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.8e-165 586.3 384 76.3
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.8e-165 586.3 391 76.7
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.1e-165 585.5 399 75.7
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 3.1e-165 585.5 372 79.0
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 4.1e-165 585.1 373 78.0
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 9.1e-165 583.9 403 75.4
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 9.1e-165 583.9 365 78.1
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.6e-164 583.2 334 84.1
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 2.0e-164 582.8 405 74.3
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.5e-164 582.0 372 78.8
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 4.5e-164 581.6 341 82.1
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 5.9e-164 581.3 387 77.5
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 7.7e-164 580.9 391 74.4
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 1.7e-163 579.7 356 82.0
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 3.8e-163 578.6 362 78.5
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 5.0e-163 578.2 343 81.6
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 8.5e-163 577.4 335 83.9
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 8.5e-163 577.4 369 78.3
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 8.5e-163 577.4 384 75.5
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.1e-162 577.0 340 82.4
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.5e-162 575.9 392 73.7
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.5e-162 575.9 336 83.3
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 3.2e-162 575.5 348 80.2
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 4.2e-162 575.1 348 80.5
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 4.2e-162 575.1 348 80.5
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 5.5e-162 574.7 337 84.3
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 5.5e-162 574.7 365 78.9
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.2e-161 573.5 367 79.3
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.2e-161 573.5 343 80.8
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 2.1e-161 572.8 370 77.8
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 4.7e-161 571.6 363 76.9
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 6.1e-161 571.2 361 76.5
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 8.0e-161 570.9 362 76.8
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 8.0e-161 570.9 379 77.3
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.0e-160 570.5 364 77.7
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 1.0e-160 570.5 343 79.3
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.0e-160 570.5 339 82.6
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.4e-160 570.1 348 79.6
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.4e-160 570.1 379 75.2
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 2.3e-160 569.3 348 79.3
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 2.3e-160 569.3 348 79.3
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 2.3e-160 569.3 390 73.3
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 5.2e-160 568.2 339 80.5
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 6.7e-160 567.8 362 76.2
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 2.0e-159 566.2 394 73.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 2.6e-159 565.8 342 82.2
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 2.8e-158 562.4 342 81.3
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 6.3e-158 561.2 392 71.9
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 8.2e-158 560.8 442 66.5
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 1.4e-157 560.1 386 72.5
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.8e-157 559.7 367 76.6
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.7e-156 555.8 334 81.1
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 4.5e-156 555.1 348 77.3
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 5.9e-156 554.7 372 75.0
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 1.7e-155 553.1 406 69.5
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.9e-155 552.4 312 86.9
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 3.8e-155 552.0 389 72.2
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 1.1e-154 550.4 428 65.2
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.1e-154 550.4 369 74.5
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.1e-154 550.4 376 76.3
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 5.5e-154 548.1 372 72.6
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.3e-152 542.7 391 72.6
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 4.0e-152 542.0 326 80.1
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 7.5e-151 537.7 351 74.1
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 2.2e-150 536.2 352 73.9
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 3.7e-150 535.4 350 75.4
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 7.0e-149 531.2 300 87.0
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 4.5e-148 528.5 387 70.0
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.2e-145 520.4 348 74.7
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 3.0e-144 515.8 401 66.1
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 5.2e-144 515.0 401 69.6
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.5e-143 513.5 376 70.2
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.3e-142 510.4 332 76.2
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 2.3e-139 499.6 338 76.3
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 5.6e-138 495.0 379 67.0
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 5.6e-138 495.0 398 65.1
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 9.5e-138 494.2 304 77.3
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.6e-132 476.9 324 69.1
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.2e-128 461.8 324 67.3
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 2.0e-127 459.9 326 67.8
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.1e-125 454.1 272 84.2
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 4.3e-122 442.2 321 65.7
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 3.4e-119 432.6 273 79.9
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 2.1e-113 413.3 336 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.3e-110 404.1 282 69.5
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.4e-88 330.9 300 54.0
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 9.3e-85 318.2 311 57.6
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 2.7e-84 316.6 293 53.2
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 3.3e-82 309.7 303 50.2
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.6e-76 290.8 202 71.3
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 1.3e-70 271.2 181 75.7
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 8.2e-57 225.3 185 63.2
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.1e-52 210.7 130 75.4
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 2.2e-49 200.7 150 72.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 7.5e-34 149.1 102 69.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.7e-26 122.9 110 54.5
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.8e-19 101.3 162 39.5
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.0e-19 100.5 106 50.0
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.6e-18 97.4 74 67.6
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 9.8e-18 95.5 62 72.6
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 9.8e-18 95.5 130 45.4


User provided reference genes

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