Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0046321 Rosa chinensis HOM05D002800 ORTHO05D340625 1.0e-63 246.5 121 100.0
Lsat_1_v5_gn_2_112341 Lactuca sativa HOM05D002800 ORTHO05D008563 1.0e-10 70.5 71 59.2
MD01G1108200 Malus domestica HOM05D002800 ORTHO05D008563 1.0e-10 70.5 71 57.7
Prupe.2G213100 Prunus persica HOM05D002800 ORTHO05D008563 1.0e-10 70.5 71 57.7
Haze_16886 Corylus avellana HOM05D002800 ORTHO05D008563 1.7e-10 69.7 62 62.9
FvH4_7g19370 Fragaria vesca HOM05D002800 ORTHO05D008563 2.3e-10 69.3 52 73.1
FAN03G0883 Fragaria x ananassa HOM05D002800 ORTHO05D008563 2.3e-10 69.3 52 73.1
FAN06G4795 Fragaria x ananassa HOM05D002800 ORTHO05D008563 2.3e-10 69.3 52 73.1
Aqoxy1G01227 Aquilegia oxysepala HOM05D002800 ORTHO05D008563 3.0e-10 68.9 71 57.7
FAN10G1943 Fragaria x ananassa HOM05D002800 ORTHO05D008563 3.0e-10 68.9 52 73.1
FAN10G3729 Fragaria x ananassa HOM05D002800 ORTHO05D008563 3.0e-10 68.9 52 73.1
CANSAT56G2733 Cannabis sativa HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
Eucgr.J01084 Eucalyptus grandis HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
HanXRQChr14g0456851 Helianthus annuus HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
Lj1C913T2 Lonicera japonica HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
Medtr1g094980 Medicago truncatula HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
PSO339G3461 Papaver somniferum HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
Psat6g183400 Pisum sativum HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
QL08p055739 Quercus lobata HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
THA.LOC104799379 Tarenaya hassleriana HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
TPR.G1920 Trifolium pratense HOM05D002800 ORTHO05D008563 3.9e-10 68.6 71 57.7
CARHR195660 Cardamine hirsuta HOM05D002800 ORTHO05D008563 5.1e-10 68.2 52 73.1
Thhalv10012819m.g Eutrema salsugineum HOM05D002800 ORTHO05D008563 5.1e-10 68.2 52 73.1
Lalb_Chr06g0162361 Lupinus albus HOM05D002800 ORTHO05D008563 5.1e-10 68.2 71 56.3
Sp6g26690 Schrenkiella parvula HOM05D002800 ORTHO05D008563 5.1e-10 68.2 52 73.1
ECA238G0500 Erigeron canadensis HOM05D002800 ORTHO05D008563 8.6e-10 67.4 71 56.3
Gohir.A10G205400 Gossypium hirsutum HOM05D002800 ORTHO05D008563 8.6e-10 67.4 52 71.2
Gohir.D10G213700 Gossypium hirsutum HOM05D002800 ORTHO05D008563 8.6e-10 67.4 52 71.2
Gorai.011G239000 Gossypium raimondii HOM05D002800 ORTHO05D008563 8.6e-10 67.4 52 71.2
Lj5g0013059 Lotus japonicus HOM05D002800 ORTHO05D008563 8.6e-10 67.4 52 71.2
PSO384G1174 Papaver somniferum HOM05D002800 ORTHO05D008563 1.1e-09 67.0 71 56.3
RcHm_v2.0_Chr1g0363251 Rosa chinensis HOM05D002800 ORTHO05D008563 1.1e-09 67.0 71 56.3
Sabra08G0026900 Salix brachista HOM05D002800 ORTHO05D008563 1.1e-09 67.0 71 56.3
Hund20229 Selenicereus undatus HOM05D002800 ORTHO05D008563 1.1e-09 67.0 52 71.2
Aa31sc262G50 Aethionema arabicum HOM05D002800 ORTHO05D008563 1.5e-09 66.6 52 69.2
AT5G17530 Arabidopsis thaliana HOM05D002800 ORTHO05D008563 1.5e-09 66.6 52 71.2
BcaC03g13525 Brassica carinata HOM05D002800 ORTHO05D008563 1.5e-09 66.6 52 71.2
A02p04250 Brassica napus HOM05D002800 ORTHO05D008563 1.5e-09 66.6 52 71.2
C02p09130 Brassica napus HOM05D002800 ORTHO05D008563 1.5e-09 66.6 52 71.2
BolC2t06825H Brassica oleracea HOM05D002800 ORTHO05D008563 1.5e-09 66.6 52 71.2
BraA02t05388Z Brassica rapa HOM05D002800 ORTHO05D008563 1.5e-09 66.6 52 71.2
Cpa.g.sc53.86 Carica papaya HOM05D002800 ORTHO05D008563 1.5e-09 66.6 71 56.3
Dinv36436 Davidia involucrata HOM05D002800 ORTHO05D008563 1.5e-09 66.6 71 56.3
Duzib106G1770 Durio zibethinus HOM05D002800 ORTHO05D008563 1.5e-09 66.6 52 71.2
Sed0015272 Sechium edule HOM05D002800 ORTHO05D008563 1.5e-09 66.6 71 56.3
Thecc.10G075100 Theobroma cacao HOM05D002800 ORTHO05D008563 1.5e-09 66.6 71 56.3
Atru.chr12.759 Acer truncatum HOM05D002800 ORTHO05D008563 1.9e-09 66.2 71 56.3
Atru.chr12.783 Acer truncatum HOM05D002800 ORTHO05D008563 1.9e-09 66.2 71 56.3
AL6G28620 Arabidopsis lyrata HOM05D002800 ORTHO05D008563 1.9e-09 66.2 52 71.2
Glyma.10G210700 Glycine max HOM05D002800 ORTHO05D008563 1.9e-09 66.2 71 56.3
Manes.10G046600 Manihot esculenta HOM05D002800 ORTHO05D008563 1.9e-09 66.2 71 56.3
Phvul.007G094900 Phaseolus vulgaris HOM05D002800 ORTHO05D008563 1.9e-09 66.2 71 56.3
Rhsim09G0151400 Rhododendron simsii HOM05D002800 ORTHO05D008563 1.9e-09 66.2 71 56.3
Sabra10G0172400 Salix brachista HOM05D002800 ORTHO05D008563 1.9e-09 66.2 71 54.9
Sc09g0006270 Simmondsia chinensis HOM05D002800 ORTHO05D008563 1.9e-09 66.2 71 56.3
Carub.0006s1576 Capsella rubella HOM05D002800 ORTHO05D008563 2.5e-09 65.9 71 56.3
CiPaw.01G272300 Carya illinoinensis HOM05D002800 ORTHO05D008563 2.5e-09 65.9 71 56.3
CsaV3_6G036460 Cucumis sativus L. HOM05D002800 ORTHO05D008563 2.5e-09 65.9 71 54.9
Nitab4.5_0001053g0090 Nicotiana tabacum HOM05D002800 ORTHO05D008563 2.5e-09 65.9 71 54.9
Nitab4.5_0002524g0030 Nicotiana tabacum HOM05D002800 ORTHO05D008563 2.5e-09 65.9 71 54.9
Solyc04g005030.4 Solanum lycopersicum HOM05D002800 ORTHO05D008563 2.5e-09 65.9 71 54.9
Sopen04g001040 Solanum pennellii HOM05D002800 ORTHO05D008563 2.5e-09 65.9 71 54.9
TWI15G0073 Tripterygium wilfordii HOM05D002800 ORTHO05D008563 2.5e-09 65.9 71 56.3
ClCG08G007530 Citrullus lanatus HOM05D002800 ORTHO05D008563 3.3e-09 65.5 71 54.9
PGSC0003DMG400001912 Solanum tuberosum HOM05D002800 ORTHO05D008563 3.3e-09 65.5 71 53.5
AUR62006403 Chenopodium quinoa HOM05D002800 ORTHO05D008563 4.3e-09 65.1 71 53.5
AUR62029746 Chenopodium quinoa HOM05D002800 ORTHO05D008563 4.3e-09 65.1 55 65.5
Glyma.20G179900 Glycine max HOM05D002800 ORTHO05D008563 4.3e-09 65.1 71 56.3
Lalb_Chr02g0142211 Lupinus albus HOM05D002800 ORTHO05D008563 4.3e-09 65.1 71 54.9
TAR369G0845 Trochodendron aralioides HOM05D002800 ORTHO05D008563 4.3e-09 65.1 52 69.2
Peaxi162Scf01011g00005 Petunia axillaris HOM05D002800 ORTHO05D008563 5.6e-09 64.7 71 54.9
Potri.008G039200 Populus trichocarpa HOM05D002800 ORTHO05D008563 5.6e-09 64.7 71 54.9
VMungo0720G2543 Vigna mungo HOM05D002800 ORTHO05D008563 5.6e-09 64.7 39 82.1
CDE08G1164 Ceratophyllum demersum HOM05D002800 ORTHO05D008563 7.3e-09 64.3 71 53.5
Nn2g10811 Nelumbo nucifera HOM05D002800 ORTHO05D008563 7.3e-09 64.3 52 69.2
PGR044G1821 Punica granatum HOM05D002800 ORTHO05D008563 7.3e-09 64.3 71 53.5
MELO3C019799.2 Cucumis melo HOM05D002800 ORTHO05D008563 9.5e-09 63.9 71 53.5
Ah.08g209400 Amaranthus hybridus HOM05D002800 ORTHO05D008563 1.2e-08 63.5 39 79.5
Oeu031346.1 Olea europaea HOM05D002800 ORTHO05D008563 1.2e-08 63.5 52 67.3
Cc02_g11310 Coffea canephora HOM05D002800 ORTHO05D008563 1.6e-08 63.2 71 53.5
Potri.010G223000 Populus trichocarpa HOM05D002800 ORTHO05D008563 1.6e-08 63.2 71 53.5
EL10Ac7g17090 Beta vulgaris HOM05D002800 ORTHO05D008563 2.1e-08 62.8 71 52.1
Migut.F01983 Erythranthe guttata HOM05D002800 ORTHO05D008563 2.1e-08 62.8 71 53.5
Os07g0447800 Oryza sativa ssp. japonica HOM05D002800 ORTHO05D008563 2.1e-08 62.8 71 53.5
SGA_v2.0_scaffold478G52239 Striga asiatica HOM05D002800 ORTHO05D008563 2.1e-08 62.8 71 53.5
Zm00001eb306410 Zea mays HOM05D002800 ORTHO05D008563 2.1e-08 62.8 71 53.5
CSS0038780 Camellia sinensis var. sinensis HOM05D002800 ORTHO05D008563 3.6e-08 62.0 71 52.1
Ciclev10031045m.g Citrus clementina HOM05D002800 ORTHO05D008563 3.6e-08 62.0 71 53.5
ATR0048G007 Amborella trichopoda HOM05D002800 ORTHO05D008563 4.7e-08 61.6 71 52.1
unitig_8.g4691 Utricularia gibba HOM05D002800 ORTHO05D008563 6.2e-08 61.2 39 74.4
CAN.G839.3 Capsicum annuum HOM05D002800 ORTHO05D008563 1.1e-07 60.5 71 50.7
SalBow4G0916 Salvia bowleyana HOM05D002800 ORTHO05D008563 1.1e-07 60.5 71 52.1
GSVIVG01016267001 Vitis vinifera HOM05D002800 ORTHO05D008563 1.4e-07 60.1 71 52.1
CSS0042688 Camellia sinensis var. sinensis HOM05D002800 ORTHO05D008563 2.3e-07 59.3 71 50.7
DCAR_006435 Daucus carota HOM05D002800 ORTHO05D008563 2.3e-07 59.3 71 50.7
HanXRQChr04g0114431 Helianthus annuus HOM05D002800 ORTHO05D008563 3.1e-07 58.9 52 63.5
arahy.Tifrunner.gnm1.ann1.KPC10E Arachis hypogaea HOM05D002800 ORTHO05D008563 4.0e-07 58.5 71 50.7
Pp3c20_2120 Physcomitrium patens HOM05D002800 ORTHO05D008563 5.2e-07 58.2 71 49.3
arahy.Tifrunner.gnm1.ann1.681S5P Arachis hypogaea HOM05D002800 ORTHO05D008563 8.9e-07 57.4 71 49.3
Mapoly0011s0106 Marchantia polymorpha HOM05D002800 ORTHO05D008563 1.2e-06 57.0 71 49.3
AagrBONN_evm.TU.Sc2ySwM_117.2596 Anthoceros agrestis HOM05D002800 ORTHO05D008563 1.5e-06 56.6 39 71.8
SMO144G0140 Selaginella moellendorffii HOM05D002800 ORTHO05D008563 1.5e-06 56.6 39 69.2
GSVIVG01001963001 Vitis vinifera HOM05D002800 ORTHO05D008563 3.4e-06 55.5 52 59.6


User provided reference genes

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