Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0045621 Rosa chinensis HOM05D003707 ORTHO05D004309 4.0e-93 344.7 172 100.0
RcHm_v2.0_Chr7g0238321 Rosa chinensis HOM05D003707 ORTHO05D004309 7.6e-52 207.6 195 64.1
FAN13G1833 Fragaria x ananassa HOM05D003707 ORTHO05D004309 1.1e-47 193.7 192 60.4
FAN18G3842 Fragaria x ananassa HOM05D003707 ORTHO05D004309 3.3e-47 192.2 192 59.9
FAN04G1986 Fragaria x ananassa HOM05D003707 ORTHO05D004309 2.1e-46 189.5 192 58.9
RcHm_v2.0_Chr5g0049351 Rosa chinensis HOM05D003707 ORTHO05D004309 2.8e-46 189.1 139 75.5
FvH4_5g36300 Fragaria vesca HOM05D003707 ORTHO05D004309 8.1e-46 187.6 192 58.9
Duzib093G2197 Durio zibethinus HOM05D003707 ORTHO05D004309 3.7e-38 162.2 193 50.3
Cfa017898 Carpinus fangiana HOM05D003707 ORTHO05D004309 1.8e-37 159.8 193 50.8
Haze_18252 Corylus avellana HOM05D003707 ORTHO05D004309 4.0e-37 158.7 192 50.0
Gohir.A06G032900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 6.9e-37 157.9 193 48.7
RcHm_v2.0_Chr3g0481851 Rosa chinensis HOM05D003707 ORTHO05D004309 1.0e-35 154.1 150 62.7
Duzib041G0396 Durio zibethinus HOM05D003707 ORTHO05D004309 2.2e-35 152.9 193 48.7
MD15G1377500 Malus domestica HOM05D003707 ORTHO05D004309 2.9e-35 152.5 192 51.6
Gohir.A05G223200 Gossypium hirsutum HOM05D003707 ORTHO05D004309 6.5e-35 151.4 193 47.2
Prupe.1G524200 Prunus persica HOM05D003707 ORTHO05D004309 1.4e-34 150.2 193 49.7
TWI56G1284 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 1.9e-34 149.8 193 49.2
TWI12G0071 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 4.2e-34 148.7 194 47.9
CiPaw.15G045200 Carya illinoinensis HOM05D003707 ORTHO05D004309 5.5e-34 148.3 189 50.3
MD08G1190000 Malus domestica HOM05D003707 ORTHO05D004309 7.1e-34 147.9 192 50.0
Cpa.g.sc36.188 Carica papaya HOM05D003707 ORTHO05D004309 1.2e-33 147.1 191 48.2
Gohir.D05G225900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 2.1e-33 146.4 193 46.1
Gorai.009G233400 Gossypium raimondii HOM05D003707 ORTHO05D004309 2.1e-33 146.4 193 46.1
CSS0029872 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 4.6e-33 145.2 194 49.0
Lj4C96G4 Lonicera japonica HOM05D003707 ORTHO05D004309 2.3e-32 142.9 194 47.9
Hma1.2p1_1180F.1_g264680 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 3.9e-32 142.1 194 48.5
Hma1.2p1_1568F.1_g291110 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 1.9e-31 139.8 193 47.7
Nitab4.5_0009374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 2.5e-31 139.4 192 45.3
Nitab4.5_0003374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 3.3e-31 139.0 192 45.3
Sopen04g029730 Solanum pennellii HOM05D003707 ORTHO05D004309 7.4e-31 137.9 194 45.9
PGSC0003DMG400030841 Solanum tuberosum HOM05D003707 ORTHO05D004309 7.4e-31 137.9 194 44.8
Solyc04g074760.3 Solanum lycopersicum HOM05D003707 ORTHO05D004309 1.6e-30 136.7 194 45.9
vmacro11166 Vaccinium macrocarpon HOM05D003707 ORTHO05D004309 2.2e-30 136.3 190 44.7
GSVIVG01009092001 Vitis vinifera HOM05D003707 ORTHO05D004309 3.7e-30 135.6 196 46.4
CiPaw.16G032500 Carya illinoinensis HOM05D003707 ORTHO05D004309 4.8e-30 135.2 195 46.2
Thecc.08G101000 Theobroma cacao HOM05D003707 ORTHO05D004309 8.2e-30 134.4 193 45.1
QL02p002269 Quercus lobata HOM05D003707 ORTHO05D004309 1.1e-29 134.0 192 45.8
CAN.G1173.6 Capsicum annuum HOM05D003707 ORTHO05D004309 4.1e-29 132.1 187 44.4
EL10Ac1g01138 Beta vulgaris HOM05D003707 ORTHO05D004309 5.3e-29 131.7 202 42.6
Gohir.D06G033800 Gossypium hirsutum HOM05D003707 ORTHO05D004309 6.9e-29 131.3 193 43.5
Gorai.010G037300 Gossypium raimondii HOM05D003707 ORTHO05D004309 6.9e-29 131.3 193 43.5
Manes.18G063100 Manihot esculenta HOM05D003707 ORTHO05D004309 9.0e-29 131.0 193 45.6
Oeu024817.1 Olea europaea HOM05D003707 ORTHO05D004309 1.2e-28 130.6 181 47.0
Sed0001081 Sechium edule HOM05D003707 ORTHO05D004309 1.5e-28 130.2 193 45.1
Actinidia29599 Actinidia chinensis HOM05D003707 ORTHO05D004309 1.0e-27 127.5 193 44.6
Rhsim06G0077200 Rhododendron simsii HOM05D003707 ORTHO05D004309 1.7e-27 126.7 246 38.2
Lalb_Chr11g0065241 Lupinus albus HOM05D003707 ORTHO05D004309 2.2e-27 126.3 194 44.3
Psat2g069400 Pisum sativum HOM05D003707 ORTHO05D004309 1.1e-26 124.0 190 40.0
MSTRG.22171 Avicennia marina HOM05D003707 ORTHO05D004309 1.2e-25 120.6 194 43.3
Thhalv10028816m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 1.6e-25 120.2 191 39.8
Ciclev10001810m.g Citrus clementina HOM05D003707 ORTHO05D004309 2.7e-25 119.4 190 41.1
HanXRQChr05g0163201 Helianthus annuus HOM05D003707 ORTHO05D004309 2.7e-25 119.4 194 42.3
PGR031G2053 Punica granatum HOM05D003707 ORTHO05D004309 2.7e-25 119.4 173 44.5
ECA246G0538 Erigeron canadensis HOM05D003707 ORTHO05D004309 4.6e-25 118.6 193 41.5
Potri.002G101400 Populus trichocarpa HOM05D003707 ORTHO05D004309 4.6e-25 118.6 200 41.5
THA.LOC104816564 Tarenaya hassleriana HOM05D003707 ORTHO05D004309 4.6e-25 118.6 192 42.2
PSO782G1937 Papaver somniferum HOM05D003707 ORTHO05D004309 6.1e-25 118.2 187 42.8
Lsat_1_v5_gn_6_105560 Lactuca sativa HOM05D003707 ORTHO05D004309 7.9e-25 117.9 200 44.0
MELO3C003545.2 Cucumis melo HOM05D003707 ORTHO05D004309 1.8e-24 116.7 193 42.5
ClCG11G014370 Citrullus lanatus HOM05D003707 ORTHO05D004309 2.3e-24 116.3 193 42.5
Migut.N02874 Erythranthe guttata HOM05D003707 ORTHO05D004309 2.3e-24 116.3 197 44.7
Peaxi162Scf00139g00014 Petunia axillaris HOM05D003707 ORTHO05D004309 5.1e-24 115.2 201 40.8
Ca_16005_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 1.1e-23 114.0 189 39.2
CsaV3_3G047770 Cucumis sativus L. HOM05D003707 ORTHO05D004309 1.9e-23 113.2 193 40.9
BcaB02g06540 Brassica carinata HOM05D003707 ORTHO05D004309 4.3e-23 112.1 189 39.2
Glyma.02G209600 Glycine max HOM05D003707 ORTHO05D004309 4.3e-23 112.1 192 41.1
Glyma.06G100100 Glycine max HOM05D003707 ORTHO05D004309 5.7e-23 111.7 194 39.7
Atru.chr13.1112 Acer truncatum HOM05D003707 ORTHO05D004309 9.7e-23 110.9 197 40.6
ECA247G2086 Erigeron canadensis HOM05D003707 ORTHO05D004309 1.7e-22 110.2 194 42.3
Duzib114G0708 Durio zibethinus HOM05D003707 ORTHO05D004309 4.8e-22 108.6 151 43.0
Aa31LG9G14730 Aethionema arabicum HOM05D003707 ORTHO05D004309 6.3e-22 108.2 192 40.1
Sed0003858 Sechium edule HOM05D003707 ORTHO05D004309 8.2e-22 107.8 193 40.9
arahy.Tifrunner.gnm1.ann1.K5H584 Arachis hypogaea HOM05D003707 ORTHO05D004309 1.4e-21 107.1 192 38.0
MD08G1189700 Malus domestica HOM05D003707 ORTHO05D004309 1.4e-21 107.1 103 58.3
CANSAT25G0959 Cannabis sativa HOM05D003707 ORTHO05D004309 1.8e-21 106.7 167 42.5
Glyma.04G098500 Glycine max HOM05D003707 ORTHO05D004309 1.8e-21 106.7 192 38.0
Oeu029729.1 Olea europaea HOM05D003707 ORTHO05D004309 1.2e-20 104.0 151 43.7
arahy.Tifrunner.gnm1.ann1.NXYL2L Arachis hypogaea HOM05D003707 ORTHO05D004309 1.5e-20 103.6 192 37.0
Cc00_g22270 Coffea canephora HOM05D003707 ORTHO05D004309 2.0e-20 103.2 193 38.3
DCAR_005285 Daucus carota HOM05D003707 ORTHO05D004309 2.6e-20 102.8 201 38.8
RcHm_v2.0_Chr7g0238301 Rosa chinensis HOM05D003707 ORTHO05D004309 2.6e-20 102.8 127 51.2
TPR.G12497 Trifolium pratense HOM05D003707 ORTHO05D004309 3.4e-20 102.4 159 39.6
Eucgr.F00380 Eucalyptus grandis HOM05D003707 ORTHO05D004309 5.9e-20 101.7 198 36.9
MSTRG.24439 Avicennia marina HOM05D003707 ORTHO05D004309 1.0e-19 100.9 108 55.6
Dinv07080 Davidia involucrata HOM05D003707 ORTHO05D004309 1.0e-19 100.9 192 39.6
Glyma.14G177700 Glycine max HOM05D003707 ORTHO05D004309 2.2e-19 99.8 193 38.3
CARHR260110 Cardamine hirsuta HOM05D003707 ORTHO05D004309 6.5e-19 98.2 191 35.1
PSO063G2842 Papaver somniferum HOM05D003707 ORTHO05D004309 6.5e-19 98.2 149 43.0
BcaB01g02805 Brassica carinata HOM05D003707 ORTHO05D004309 8.5e-19 97.8 191 35.1
unitig_8.g4846 Utricularia gibba HOM05D003707 ORTHO05D004309 1.1e-18 97.4 206 38.3
VMungo0647G1227 Vigna mungo HOM05D003707 ORTHO05D004309 1.4e-18 97.1 192 38.5
Phvul.008G177200 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 1.9e-18 96.7 190 37.9
Sp1g13060 Schrenkiella parvula HOM05D003707 ORTHO05D004309 3.2e-18 95.9 189 37.6
VMungo1309G1468 Vigna mungo HOM05D003707 ORTHO05D004309 3.2e-18 95.9 191 37.2
Phvul.009G033700 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 2.1e-17 93.2 196 37.8
MD08G1190200 Malus domestica HOM05D003707 ORTHO05D004309 4.7e-17 92.0 65 72.3
unitig_578.g16186 Utricularia gibba HOM05D003707 ORTHO05D004309 7.9e-17 91.3 207 36.2
Lj1g0011682 Lotus japonicus HOM05D003707 ORTHO05D004309 1.0e-16 90.9 199 35.7
EL10Ac4g09478 Beta vulgaris HOM05D029458 ORTHO05D004309 1.4e-16 90.5 88 55.7
HanXRQChr17g0556331 Helianthus annuus HOM05D003707 ORTHO05D004309 1.4e-16 90.5 197 36.5
MBI03_g38469_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 1.4e-16 90.5 150 40.0
BcaC05g25387 Brassica carinata HOM05D003707 ORTHO05D004309 1.8e-16 90.1 177 36.2
HanXRQChr10g0278171 Helianthus annuus HOM05D003707 ORTHO05D004309 1.8e-16 90.1 194 37.1
A09p29580 Brassica napus HOM05D003707 ORTHO05D004309 5.1e-16 88.6 173 37.0
BraA09t38526Z Brassica rapa HOM05D003707 ORTHO05D004309 5.1e-16 88.6 173 37.0
Sabra02G0079500 Salix brachista HOM05D003707 ORTHO05D004309 8.8e-16 87.8 267 31.8
BraA06t24253Z Brassica rapa HOM05D003707 ORTHO05D004309 1.1e-15 87.4 189 34.9
Hund16884 Selenicereus undatus HOM05D003707 ORTHO05D004309 1.1e-15 87.4 197 35.0
SalBow2G0015 Salvia bowleyana HOM05D003707 ORTHO05D004309 1.5e-15 87.0 122 44.3
SalBow2G2952 Salvia bowleyana HOM05D003707 ORTHO05D004309 1.5e-15 87.0 122 44.3
Actinidia10349 Actinidia chinensis HOM05D003707 ORTHO05D004309 4.4e-15 85.5 194 36.1
A06p10740 Brassica napus HOM05D003707 ORTHO05D004309 4.4e-15 85.5 189 34.4
C05p12640 Brassica napus HOM05D003707 ORTHO05D004309 4.4e-15 85.5 189 33.9
TPR.G6353 Trifolium pratense HOM05D003707 ORTHO05D004309 5.7e-15 85.1 106 48.1
CDE02G0255 Ceratophyllum demersum HOM05D003707 ORTHO05D004309 7.4e-15 84.7 168 35.7
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 9.7e-15 84.3 140 42.9
CSS0014867 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 9.7e-15 84.3 194 34.5
Thhalv10008342m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 9.7e-15 84.3 189 34.9
CSS0001361 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 1.3e-14 84.0 194 34.5
Sp6g08460 Schrenkiella parvula HOM05D003707 ORTHO05D004309 1.3e-14 84.0 188 30.9
Carub.0001s1444 Capsella rubella HOM05D003707 ORTHO05D004309 2.4e-13 79.7 124 41.9
Psat5g050280 Pisum sativum HOM05D003707 ORTHO05D004309 2.4e-13 79.7 105 45.7
MBI06_g46882_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 3.1e-13 79.3 159 37.7
MBI06_g47948_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 4.1e-13 79.0 159 37.7
PGR031G0663 Punica granatum HOM05D003707 ORTHO05D004309 9.1e-13 77.8 193 35.8
BcaB01g01380 Brassica carinata HOM05D003707 ORTHO05D004309 1.5e-12 77.0 175 33.7
Medtr3g099600 Medicago truncatula HOM05D003707 ORTHO05D004309 2.0e-12 76.6 105 44.8
ClCG08G011330 Citrullus lanatus HOM05D003707 ORTHO05D004309 2.6e-12 76.3 194 33.5
AT1G14680 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 3.4e-12 75.9 191 34.0
BraA03t12047Z Brassica rapa HOM05D003707 ORTHO05D004309 3.4e-12 75.9 225 30.7
Ca_16033_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 3.4e-12 75.9 105 44.8
RcHm_v2.0_Chr5g0044811 Rosa chinensis HOM05D003707 ORTHO05D004309 3.4e-12 75.9 44 86.4
SGA_v2.0_scaffold4G02188 Striga asiatica HOM05D003707 ORTHO05D004309 3.4e-12 75.9 194 37.1
Lalb_Chr04g0253021 Lupinus albus HOM05D003707 ORTHO05D004309 5.9e-12 75.1 201 32.8
AL6G41440 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 1.3e-11 73.9 192 31.2
CARHR015180 Cardamine hirsuta HOM05D003707 ORTHO05D004309 1.9e-10 70.1 192 32.3
Hund26994 Selenicereus undatus HOM05D003707 ORTHO05D004309 1.9e-10 70.1 196 32.1
AT4G09060 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 1.6e-09 67.0 191 30.4
Carub.0006s2764 Capsella rubella HOM05D003707 ORTHO05D004309 2.7e-09 66.2 192 30.7
MBI03_g47917_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 3.6e-09 65.9 152 33.6
BcaC01g04732 Brassica carinata HOM05D003707 ORTHO05D004309 8.0e-09 64.7 189 28.6
Cpa.g.sc36.189 Carica papaya HOM05D003707 ORTHO05D004309 8.0e-09 64.7 162 37.0
COL.COLO4_11998 Corchorus olitorius HOM05D003707 ORTHO05D004309 1.4e-08 63.9 169 32.0
C03p34360 Brassica napus HOM05D003707 ORTHO05D004309 3.0e-08 62.8 192 30.2
A03p28420 Brassica napus HOM05D003707 ORTHO05D004309 3.9e-08 62.4 193 30.6
MBI12_g20562_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 2.6e-07 59.7 48 64.6
AL1G26650 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 3.3e-07 59.3 190 30.5
BolC3t15746H Brassica oleracea HOM05D003707 ORTHO05D004309 5.7e-07 58.5 223 27.4
BolC5t30008H Brassica oleracea HOM05D000624 ORTHO05D000495 5.7e-07 58.5 103 38.8
Haze_21792 Corylus avellana HOM05D003707 ORTHO05D004309 3.7e-06 55.8 41 61.0
BcaC07g41551 Brassica carinata HOM05D003707 ORTHO05D032288 8.2e-06 54.7 90 40.0
Hma1.2p1_0526F.1_g172800 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 8.2e-06 54.7 29 79.3


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