Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 1.7e-243 845.5 403 100.0
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 4.1e-181 638.3 403 78.2
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 9.8e-151 537.3 399 66.4
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 2.9e-150 535.8 397 67.8
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 2.4e-149 532.7 409 66.0
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.5e-146 523.5 390 67.4
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.7e-139 500.0 382 65.4
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.9e-25 120.6 369 31.2
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-25 119.4 375 32.0
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-24 116.7 369 30.4
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 7.0e-24 115.9 382 26.7
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.6e-23 114.8 333 31.5
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-23 114.4 333 31.5
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 3.5e-23 113.6 431 28.3
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 3.5e-23 113.6 431 28.3
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 4.6e-23 113.2 333 31.2
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-23 113.2 333 31.5
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-22 112.1 340 32.9
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-22 110.5 337 32.6
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-22 110.5 413 26.9
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.0e-22 109.8 336 32.1
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-21 108.6 340 29.4
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-21 107.5 388 28.1
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 9.5e-21 105.5 378 27.2
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.5e-21 105.5 382 28.3
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.5e-21 105.5 384 28.4
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.5e-21 105.5 382 28.5
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-20 105.1 375 27.7
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 2.8e-20 104.0 343 28.6
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.6e-20 103.6 332 28.9
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 3.6e-20 103.6 339 30.7
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 3.6e-20 103.6 339 30.7
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 6.2e-20 102.8 382 28.0
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-19 100.9 382 28.3
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-19 100.5 322 29.5
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-18 98.2 322 29.2
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 4.4e-18 96.7 333 28.2
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.3e-17 92.4 367 27.2
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.3e-17 92.4 367 27.2
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-16 92.0 202 35.1
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-16 91.3 238 28.6
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-16 91.3 373 25.2
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-16 90.9 238 28.6
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 3.2e-16 90.5 419 28.2
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 4.1e-16 90.1 265 30.9
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.1e-16 89.4 321 27.4
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-14 85.5 308 29.2
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-14 83.2 332 27.7
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-13 81.3 269 30.5
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 4.3e-13 80.1 308 28.6
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-12 77.0 313 27.8
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-12 77.0 314 28.3
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-11 74.7 245 31.8
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 6.8e-11 72.8 310 27.1
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-10 71.6 149 34.9
FAN21G2564 Fragaria x ananassa HOM05D031336 ORTHO05D029596 7.6e-10 69.3 346 25.4
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 2.2e-09 67.8 172 32.6
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 3.8e-09 67.0 289 27.3
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 4.9e-09 66.6 344 25.9
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-08 63.9 207 29.0
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 1.2e-07 62.0 238 29.0
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.1e-07 61.2 279 26.5
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.7e-07 60.8 335 25.1
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-07 60.1 272 25.4
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.8e-07 59.3 246 26.4
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 7.8e-07 59.3 139 34.5
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-06 58.5 178 30.9
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-06 58.5 198 26.8


User provided reference genes

Program Settings