Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 5.8e-258 893.6 435 100.0
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 2.2e-180 636.0 403 78.2
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 3.2e-139 499.2 455 61.5
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 3.0e-137 492.7 446 61.9
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.2e-133 480.7 409 63.3
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 8.4e-132 474.6 390 65.1
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.8e-126 456.8 383 63.7
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-22 111.7 422 27.0
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-22 110.5 319 31.7
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 7.1e-22 109.4 319 31.3
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.1e-22 109.4 319 31.7
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 2.1e-21 107.8 429 29.1
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 2.1e-21 107.8 429 29.1
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-21 107.5 370 30.3
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.7e-21 107.5 395 27.8
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 3.5e-21 107.1 425 27.5
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-20 105.5 265 34.0
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-20 104.4 375 28.0
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-20 104.4 319 30.4
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-20 104.0 378 27.2
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-19 102.1 237 35.0
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-19 101.7 429 26.6
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-19 101.3 375 29.6
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-19 100.9 324 29.0
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 2.5e-19 100.9 386 28.5
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 5.6e-19 99.8 372 30.1
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 7.4e-19 99.4 395 28.4
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-18 97.1 319 29.5
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 4.8e-18 96.7 368 28.8
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 4.8e-18 96.7 368 28.8
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-17 94.7 355 28.7
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-17 94.7 355 28.7
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-17 94.4 264 31.4
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-17 93.6 301 29.2
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-17 93.6 413 27.4
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-17 93.2 379 26.1
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-16 91.7 378 25.7
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-16 91.7 421 25.9
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-16 91.3 355 25.9
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-16 90.9 290 29.3
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-16 90.9 290 29.3
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 4.5e-16 90.1 373 26.8
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 5.8e-16 89.7 381 28.1
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 7.6e-16 89.4 328 28.0
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-16 89.4 315 28.3
FvH4_2g38420 Fragaria vesca HOM05D013417 ORTHO05D022618 1.3e-15 88.6 398 25.9
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-15 87.8 290 29.3
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-15 87.0 377 25.5
FvH4_3g43023 Fragaria vesca HOM05D015758 ORTHO05D022659 1.9e-14 84.7 329 29.5
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 1.9e-14 84.7 343 27.1
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.1e-13 81.3 420 25.7
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-13 79.3 279 26.9
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 1.0e-12 79.0 383 25.6
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-12 77.0 333 27.0
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 6.7e-12 76.3 381 27.6
RcHm_v2.0_Chr5g0043831 Rosa chinensis HOM05D024550 ORTHO05D025568 1.1e-11 75.5 395 23.0
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-11 73.2 322 25.8
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-11 73.2 386 27.5
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 7.4e-11 72.8 387 26.9
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 1.6e-10 71.6 336 25.0
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-10 71.2 278 28.8
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 4.8e-10 70.1 247 27.9
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-09 68.2 366 24.6
FAN06G0067 Fragaria x ananassa HOM05D024550 ORTHO05D025568 2.4e-09 67.8 394 23.6
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 5.3e-09 66.6 374 25.7
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-09 66.2 286 27.3
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 1.5e-08 65.1 225 29.3
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.0e-08 64.7 306 27.5
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 2.2e-07 61.2 355 25.1
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-07 60.5 366 24.3
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-06 58.5 144 33.3
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.9e-06 58.2 344 25.0
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-06 58.2 118 35.6
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 4.2e-06 57.0 178 32.0
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.2e-06 56.2 277 26.0
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 9.3e-06 55.8 192 26.6


User provided reference genes

Program Settings