Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0043531 Rosa chinensis HOM05D019226 ORTHO05D012126 3.4e-109 398.3 193 100.0
RcHm_v2.0_Chr3g0491041 Rosa chinensis HOM05D019226 ORTHO05D012126 1.6e-103 379.4 192 95.8
RcHm_v2.0_Chr5g0079421 Rosa chinensis HOM05D019226 ORTHO05D012126 1.6e-103 379.4 192 95.3
RcHm_v2.0_Chr7g0227541 Rosa chinensis HOM05D019226 ORTHO05D012126 1.3e-92 343.2 192 88.5
RcHm_v2.0_Chr1g0343281 Rosa chinensis HOM05D019226 ORTHO05D012126 2.9e-92 342.0 192 87.0
RcHm_v2.0_Chr1g0347821 Rosa chinensis HOM05D019226 ORTHO05D012126 7.0e-30 134.8 80 78.8
RcHm_v2.0_Chr4g0423001 Rosa chinensis HOM05D019226 ORTHO05D012126 3.1e-25 119.4 69 78.3
FAN01G0822 Fragaria x ananassa HOM05D026390 ORTHO05D012126 3.6e-18 95.9 208 34.6
FAN17G2753 Fragaria x ananassa HOM05D026390 ORTHO05D012126 4.9e-15 85.5 115 41.7
FvH4_6g40675 Fragaria vesca HOM05D020255 ORTHO05D020676 3.0e-12 76.3 214 30.8
FAN20G2944 Fragaria x ananassa HOM05D017901 ORTHO05D011574 5.6e-11 72.0 131 36.6
FAN02G2827 Fragaria x ananassa HOM05D020255 ORTHO05D020676 1.2e-10 70.9 169 32.5
FvH4_1g25491 Fragaria vesca HOM05D000045 ORTHO05D025474 2.8e-10 69.7 124 39.5
FvH4_3g37241 Fragaria vesca HOM05D011702 ORTHO05D011574 2.8e-10 69.7 152 36.8
FvH4_4g03326 Fragaria vesca HOM05D011702 ORTHO05D025474 2.8e-10 69.7 124 39.5
FvH4_6g40312 Fragaria vesca HOM05D000045 ORTHO05D025474 2.8e-10 69.7 124 39.5
FvH4_c6g00031 Fragaria vesca HOM05D000045 ORTHO05D025474 2.8e-10 69.7 124 39.5
FvH4_3g22671 Fragaria vesca HOM05D000045 ORTHO05D011574 4.7e-10 68.9 129 36.4
RcHm_v2.0_Chr5g0039441 Rosa chinensis HOM05D000045 ORTHO05D011574 4.7e-10 68.9 207 30.0
FvH4_2g09441 Fragaria vesca HOM05D011702 ORTHO05D020676 4.0e-09 65.9 152 36.2
FAN16G0470 Fragaria x ananassa HOM05D017901 ORTHO05D012126 5.2e-09 65.5 132 34.8
FAN03G2691 Fragaria x ananassa HOM05D011702 ORTHO05D045971 8.9e-09 64.7 207 32.9
RcHm_v2.0_Chr6g0268121 Rosa chinensis HOM05D029995 ORTHO05D003357 1.5e-08 63.9 84 40.5
CANSAT78G1377 Cannabis sativa HOM05D000045 ORTHO05D000611 2.0e-08 63.5 110 36.4
FAN02G3637 Fragaria x ananassa HOM05D017901 ORTHO05D015208 2.0e-08 63.5 109 37.6
FvH4_4g07725 Fragaria vesca HOM05D011702 ORTHO05D045971 2.6e-08 63.2 209 32.5
FvH4_4g16251 Fragaria vesca HOM05D015025 ORTHO05D015208 2.6e-08 63.2 184 31.5
FvH4_2g00731 Fragaria vesca HOM05D000045 ORTHO05D011574 5.8e-08 62.0 140 32.9
FvH4_2g06391 Fragaria vesca HOM05D015025 ORTHO05D015208 5.8e-08 62.0 112 37.5
FvH4_7g05771 Fragaria vesca HOM05D000045 ORTHO05D012126 5.8e-08 62.0 180 30.6
RcHm_v2.0_Chr5g0042361 Rosa chinensis HOM05D015025 ORTHO05D015208 1.7e-07 60.5 78 44.9
RcHm_v2.0_Chr6g0251121 Rosa chinensis HOM05D000045 ORTHO05D011574 2.2e-07 60.1 98 35.7
FvH4_2g27932 Fragaria vesca HOM05D012284 ORTHO05D003357 4.9e-07 58.9 206 28.6
RcHm_v2.0_Chr6g0246161 Rosa chinensis HOM05D000045 ORTHO05D011574 1.1e-06 57.8 78 43.6
Atru.chr12.1212 Acer truncatum HOM05D000045 ORTHO05D000067 4.1e-06 55.8 131 31.3
Atru.chr8.433 Acer truncatum HOM05D005194 ORTHO05D015208 5.4e-06 55.5 66 48.5
FAN13G1008 Fragaria x ananassa HOM05D011702 ORTHO05D025474 5.4e-06 55.5 104 37.5
Rhsim02G0142300 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.4e-06 55.5 124 37.1
Rhsim11G0186200 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.4e-06 55.5 108 38.0
FvH4_4g10122 Fragaria vesca HOM05D000045 ORTHO05D012261 7.1e-06 55.1 109 32.1
Rhsim04G0145900 Rhododendron simsii HOM05D000045 ORTHO05D003665 7.1e-06 55.1 128 32.8


User provided reference genes

Program Settings