Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0040671 Rosa chinensis HOM05D004902 ORTHO05D006603 0.0e+00 1169.5 585 100.0
FAN18G4155 Fragaria x ananassa HOM05D004902 ORTHO05D006603 0.0e+00 1087.0 593 93.1
FAN04G1963 Fragaria x ananassa HOM05D004902 ORTHO05D006603 0.0e+00 1084.3 595 92.6
FAN13G3021 Fragaria x ananassa HOM05D004902 ORTHO05D006603 0.0e+00 1077.8 607 90.6
Prupe.4G217200 Prunus persica HOM05D004902 ORTHO05D006603 2.2e-300 1035.0 585 89.9
MD03G1198000 Malus domestica HOM05D004902 ORTHO05D006603 3.2e-296 1021.1 585 88.5
FAN08G0007 Fragaria x ananassa HOM05D004902 ORTHO05D006603 4.7e-295 1017.3 585 88.9
QL08p009339 Quercus lobata HOM05D004902 ORTHO05D006603 1.0e-286 989.6 595 83.4
Glyma.18G093200 Glycine max HOM05D004902 ORTHO05D006603 9.8e-285 983.0 591 84.3
TWI39G0824 Tripterygium wilfordii HOM05D004902 ORTHO05D006603 4.9e-284 980.7 585 84.6
TAR362G0117 Trochodendron aralioides HOM05D004902 ORTHO05D006603 3.2e-283 978.0 588 83.7
Cfa020314 Carpinus fangiana HOM05D004902 ORTHO05D006603 5.4e-283 977.2 594 83.3
CiPaw.11G191900 Carya illinoinensis HOM05D004902 ORTHO05D006603 7.0e-283 976.9 595 83.5
Dinv40776 Davidia involucrata HOM05D004902 ORTHO05D006603 2.7e-282 974.9 574 84.3
Glyma.18G108300 Glycine max HOM05D004902 ORTHO05D006603 7.8e-282 973.4 592 83.1
Manes.03G132000 Manihot esculenta HOM05D004902 ORTHO05D006603 1.0e-281 973.0 590 83.6
arahy.Tifrunner.gnm1.ann1.67NMHM Arachis hypogaea HOM05D004902 ORTHO05D006603 2.3e-281 971.8 596 83.2
Phvul.006G046400 Phaseolus vulgaris HOM05D004902 ORTHO05D006603 3.0e-281 971.5 577 84.6
Hma1.2p1_0036F.1_g023440 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 1.1e-280 969.5 583 83.0
Medtr3g052850 Medicago truncatula HOM05D004902 ORTHO05D006603 1.1e-280 969.5 588 82.7
Atru.chr2.3483 Acer truncatum HOM05D004902 ORTHO05D006603 2.5e-280 968.4 588 83.0
Ciclev10007818m.g Citrus clementina HOM05D004902 ORTHO05D006603 9.5e-280 966.5 576 84.2
Gohir.A11G067600 Gossypium hirsutum HOM05D004902 ORTHO05D006603 9.5e-280 966.5 579 83.6
Ca_14752_v3 Cicer arietinum L. HOM05D004902 ORTHO05D006603 3.6e-279 964.5 585 82.9
Gohir.D11G071500 Gossypium hirsutum HOM05D004902 ORTHO05D006603 8.0e-279 963.4 579 83.4
CANSAT11G1621 Cannabis sativa HOM05D004902 ORTHO05D006603 3.1e-278 961.4 591 82.4
TPR.G33794 Trifolium pratense HOM05D004902 ORTHO05D006603 4.0e-278 961.1 592 81.4
arahy.Tifrunner.gnm1.ann1.E3581I Arachis hypogaea HOM05D004902 ORTHO05D006603 6.8e-278 960.3 610 81.1
GSVIVG01037683001 Vitis vinifera HOM05D004902 ORTHO05D006603 6.8e-278 960.3 592 82.3
CSS0007833 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 8.9e-278 959.9 549 86.5
Lj4g0024994 Lotus japonicus HOM05D004902 ORTHO05D006603 8.9e-278 959.9 547 87.2
Eucgr.F00742 Eucalyptus grandis HOM05D004902 ORTHO05D006603 1.2e-277 959.5 589 81.5
Gorai.007G076800 Gossypium raimondii HOM05D004902 ORTHO05D006603 1.5e-277 959.1 579 83.2
Psat5g177120 Pisum sativum HOM05D004902 ORTHO05D006603 1.5e-277 959.1 592 81.6
CSS0000094 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 2.6e-277 958.4 549 86.3
MELO3C013152.2 Cucumis melo HOM05D004902 ORTHO05D006603 4.4e-277 957.6 572 84.3
Migut.M01740 Erythranthe guttata HOM05D004902 ORTHO05D006603 2.2e-276 955.3 565 83.0
Duzib264G0382 Durio zibethinus HOM05D004902 ORTHO05D006603 2.9e-276 954.9 578 83.0
Actinidia10742 Actinidia chinensis HOM05D004902 ORTHO05D006603 6.4e-276 953.7 572 83.0
ClCG09G010930 Citrullus lanatus HOM05D004902 ORTHO05D006603 6.4e-276 953.7 573 84.1
Sopen07g033000 Solanum pennellii HOM05D004902 ORTHO05D006603 6.4e-276 953.7 589 80.8
SGA_v2.0_scaffold172G39008 Striga asiatica HOM05D004902 ORTHO05D006603 1.4e-275 952.6 575 83.0
Solyc07g064810.3 Solanum lycopersicum HOM05D004902 ORTHO05D006603 2.4e-275 951.8 589 80.6
THA.LOC104811618 Tarenaya hassleriana HOM05D004902 ORTHO05D006603 5.4e-275 950.7 583 82.2
Aqoxy5G00324 Aquilegia oxysepala HOM05D004902 ORTHO05D006603 9.2e-275 949.9 566 83.7
Thecc.09G123200 Theobroma cacao HOM05D004902 ORTHO05D006603 9.2e-275 949.9 590 81.7
MSTRG.14441 Avicennia marina HOM05D004902 ORTHO05D006603 2.7e-274 948.3 569 83.3
Lalb_Chr10g0107081 Lupinus albus HOM05D004902 ORTHO05D006603 2.7e-274 948.3 585 81.7
PGSC0003DMG400022211 Solanum tuberosum HOM05D004902 ORTHO05D006603 4.6e-274 947.6 589 80.5
Sc02g0003710 Simmondsia chinensis HOM05D004902 ORTHO05D006603 1.0e-273 946.4 585 81.4
Potri.001G267400 Populus trichocarpa HOM05D004902 ORTHO05D006603 3.0e-273 944.9 591 81.0
Lj1A876G36 Lonicera japonica HOM05D004902 ORTHO05D006603 3.9e-273 944.5 557 84.6
Sed0009199 Sechium edule HOM05D004902 ORTHO05D006603 6.6e-273 943.7 599 80.5
COL.COLO4_19537 Corchorus olitorius HOM05D004902 ORTHO05D006603 8.6e-273 943.3 587 81.1
Oeu062577.2 Olea europaea HOM05D004902 ORTHO05D006603 1.1e-272 943.0 609 79.3
Potri.009G061700 Populus trichocarpa HOM05D004902 ORTHO05D006603 1.1e-272 943.0 589 80.5
CARHR234510 Cardamine hirsuta HOM05D004902 ORTHO05D006603 2.5e-272 941.8 571 81.8
FvH4_5g29730 Fragaria vesca HOM05D004902 ORTHO05D006603 2.5e-272 941.8 479 96.9
Thhalv10024744m.g Eutrema salsugineum HOM05D004902 ORTHO05D006603 5.6e-272 940.6 570 81.8
AL7G25950 Arabidopsis lyrata HOM05D004902 ORTHO05D006603 9.5e-272 939.9 587 80.1
PGR083G1168 Punica granatum HOM05D004902 ORTHO05D006603 1.6e-271 939.1 593 81.1
CAN.G337.72 Capsicum annuum HOM05D004902 ORTHO05D006603 2.1e-271 938.7 549 84.2
Carub.0007s1395 Capsella rubella HOM05D004902 ORTHO05D006603 2.8e-271 938.3 571 81.8
MSTRG.12985 Avicennia marina HOM05D004902 ORTHO05D006603 3.6e-271 937.9 546 84.2
C01p23080 Brassica napus HOM05D004902 ORTHO05D006603 3.6e-271 937.9 580 80.7
Hund26666 Selenicereus undatus HOM05D004902 ORTHO05D006603 6.2e-271 937.2 589 80.8
Aa31LG3G11010 Aethionema arabicum HOM05D004902 ORTHO05D006603 1.8e-270 935.6 572 82.2
Sp7g24850 Schrenkiella parvula HOM05D004902 ORTHO05D006603 2.3e-270 935.3 571 81.3
HanXRQChr08g0233501 Helianthus annuus HOM05D004902 ORTHO05D006603 8.9e-270 933.3 556 82.4
Lsat_1_v5_gn_5_3021 Lactuca sativa HOM05D004902 ORTHO05D006603 2.0e-269 932.2 569 80.7
AT4G26900 Arabidopsis thaliana HOM05D004902 ORTHO05D006603 2.6e-269 931.8 571 80.6
HanXRQChr05g0159411 Helianthus annuus HOM05D004902 ORTHO05D006603 3.4e-269 931.4 585 79.1
BolC1t02242H Brassica oleracea HOM05D004902 ORTHO05D006603 5.8e-269 930.6 572 81.3
BcaB06g27301 Brassica carinata HOM05D004902 ORTHO05D006603 6.4e-268 927.2 569 80.8
ECA246G3742 Erigeron canadensis HOM05D004902 ORTHO05D006603 1.1e-267 926.4 557 82.0
A04p12110 Brassica napus HOM05D004902 ORTHO05D006603 1.6e-266 922.5 592 78.9
C04p45770 Brassica napus HOM05D004902 ORTHO05D006603 4.6e-266 921.0 569 80.7
BolC4t26162H Brassica oleracea HOM05D004902 ORTHO05D006603 1.7e-265 919.1 571 80.6
ATR0736G184 Amborella trichopoda HOM05D004902 ORTHO05D006603 4.3e-264 914.4 539 83.9
Nn8g38868 Nelumbo nucifera HOM05D004902 ORTHO05D006603 5.6e-264 914.1 571 80.9
CDE02G3624 Ceratophyllum demersum HOM05D004902 ORTHO05D006603 9.5e-264 913.3 584 78.4
Oeu013136.2 Olea europaea HOM05D004902 ORTHO05D006603 3.6e-263 911.4 627 75.9
EL10Ac1g01638 Beta vulgaris HOM05D004902 ORTHO05D006603 1.1e-262 909.8 597 76.9
Haze_09705 Corylus avellana HOM05D004902 ORTHO05D006603 2.3e-262 908.7 594 78.8
BcaNung03568 Brassica carinata HOM05D004902 ORTHO05D006603 2.2e-260 902.1 570 79.5
BraA04t16876Z Brassica rapa HOM05D004902 ORTHO05D006603 2.7e-258 895.2 620 75.6
AUR62026758 Chenopodium quinoa HOM05D004902 ORTHO05D006603 1.3e-257 892.9 558 79.7
Rhsim06G0219700 Rhododendron simsii HOM05D004902 ORTHO05D006603 5.1e-257 891.0 585 76.8
Gorai.011G209600 Gossypium raimondii HOM05D004902 ORTHO05D006603 9.6e-256 886.7 576 78.6
Gohir.D10G186800 Gossypium hirsutum HOM05D004902 ORTHO05D006603 6.9e-254 880.6 576 78.1
HPP92_013494 Vanilla planifolia HOM05D004902 ORTHO05D006603 1.1e-251 873.2 588 74.5
Os03g0256400 Oryza sativa ssp. japonica HOM05D004902 ORTHO05D006603 6.6e-249 864.0 550 77.5
HPP92_026047 Vanilla planifolia HOM05D004902 ORTHO05D006603 6.6e-249 864.0 582 74.7
Gohir.A10G179900 Gossypium hirsutum HOM05D004902 ORTHO05D006603 1.1e-246 856.7 592 75.8
vmacro02220 Vaccinium macrocarpon HOM05D004902 ORTHO05D006603 5.3e-246 854.4 620 72.3
PSO210G2842 Papaver somniferum HOM05D004902 ORTHO05D006603 1.3e-244 849.7 545 78.7
Sabra16G0163900 Salix brachista HOM05D004902 ORTHO05D006603 4.9e-244 847.8 655 69.0
PSO832G3378 Papaver somniferum HOM05D004902 ORTHO05D006603 1.9e-243 845.9 571 76.2
Ah.13g076200 Amaranthus hybridus HOM05D004902 ORTHO05D006603 1.2e-242 843.2 544 78.7
CsaV3_7G021940 Cucumis sativus L. HOM05D004902 ORTHO05D006603 6.2e-239 830.9 520 81.0
AagrBONN_evm.TU.Sc2ySwM_117.3547 Anthoceros agrestis HOM05D004902 ORTHO05D006603 8.1e-239 830.5 593 70.3
Peaxi162Scf00235g00424 Petunia axillaris HOM05D004902 ORTHO05D006603 6.9e-238 827.4 576 74.0
DCAR_022578 Daucus carota HOM05D004902 ORTHO05D006603 4.0e-230 801.6 565 73.3
Mapoly0071s0086 Marchantia polymorpha HOM05D004902 ORTHO05D006603 7.6e-229 797.3 576 69.8
Nitab4.5_0022774g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 3.5e-226 788.5 463 83.2
Pp3c1_20280 Physcomitrium patens HOM05D004902 ORTHO05D006603 2.3e-225 785.8 581 69.4
Hma1.2p1_0036F.1_g023430 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 2.8e-223 778.9 474 81.4
SMO119G0352 Selaginella moellendorffii HOM05D004902 ORTHO05D006603 1.4e-222 776.5 532 72.0
CBR_g4356 Chara braunii HOM05D004902 ORTHO05D006603 2.6e-221 772.3 563 68.6
unitig_85.g27329 Utricularia gibba HOM05D004902 ORTHO05D006603 3.4e-213 745.3 562 69.4
AUR62013514 Chenopodium quinoa HOM05D004902 ORTHO05D006603 1.4e-211 740.0 545 70.5
Nitab4.5_0013139g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 7.5e-192 674.5 405 83.0
CAN.G677.16 Capsicum annuum HOM05D004902 ORTHO05D006603 9.7e-192 674.1 523 68.1
MCO02G311 Micromonas commoda HOM05D004902 ORTHO05D006603 2.7e-186 656.0 553 60.8
MD11G1214000 Malus domestica HOM05D004902 ORTHO05D006603 1.1e-171 607.4 341 89.7
HanXRQChr08g0233821 Helianthus annuus HOM05D004902 ORTHO05D006603 7.0e-166 588.2 410 73.4
A01p18110 Brassica napus HOM05D004902 ORTHO05D006603 7.3e-163 578.2 554 58.8
PRCOL_00006765 Prasinoderma coloniale HOM05D004902 ORTHO05D006603 3.1e-161 572.8 510 58.6
Zm00001eb011150 Zea mays HOM05D004902 ORTHO05D006603 5.2e-161 572.0 356 80.9
Cfa025092 Carpinus fangiana HOM05D004902 ORTHO05D006603 1.6e-154 550.4 545 53.6
Cre11.g481500 Chlamydomonas reinhardtii HOM05D004902 ORTHO05D006603 9.3e-134 481.5 566 48.1
Cpa.g.sc12.277 Carica papaya HOM05D004902 ORTHO05D006603 1.5e-131 474.2 257 90.7
MD11G1213900 Malus domestica HOM05D004902 ORTHO05D006603 1.7e-95 354.4 252 72.2
Cpa.g.c34168 Carica papaya HOM05D004902 ORTHO05D006603 2.6e-91 340.5 251 70.9
Glyma.08G323300 Glycine max HOM05D004902 ORTHO05D006603 8.5e-71 272.3 208 67.8
Lsat_1_v5_gn_3_2301 Lactuca sativa HOM05D004902 ORTHO05D006603 7.2e-70 269.2 377 45.4
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 7.8e-56 222.6 198 57.6
RcHm_v2.0_Chr4g0412471 Rosa chinensis HOM05D004902 ORTHO05D006603 2.7e-48 197.6 153 71.2
SEGI_16435 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 7.3e-46 189.5 116 82.8
VMungo0540G1125 Vigna mungo HOM05D004902 ORTHO05D006603 7.3e-46 189.5 145 72.4
SEGI_31768 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 7.8e-40 169.5 118 66.9
BraA01t01766Z Brassica rapa HOM05D004902 ORTHO05D006603 2.3e-36 157.9 102 76.5
Aqoxy84s005 Aquilegia oxysepala HOM05D004902 ORTHO05D038539 5.1e-31 140.2 314 32.2
Glyma.08G319400 Glycine max HOM05D004902 ORTHO05D029739 4.4e-27 127.1 76 85.5
Lsat_1_v5_gn_0_44000 Lactuca sativa HOM05D004902 ORTHO05D038539 1.3e-26 125.6 312 32.7
BcaNung03560 Brassica carinata HOM05D004902 ORTHO05D006603 5.3e-20 103.6 85 64.7
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 1.2e-19 102.4 58 87.9
Ah.01g018890 Amaranthus hybridus HOM05D004902 ORTHO05D006603 2.1e-13 81.6 106 48.1
Lsat_1_v5_gn_3_69341 Lactuca sativa HOM05D004902 ORTHO05D006603 3.1e-12 77.8 126 42.1
TPR.G39977 Trifolium pratense HOM05D004902 ORTHO05D006603 5.3e-12 77.0 41 85.4
Lsat_1_v5_gn_4_11281 Lactuca sativa HOM05D004902 ORTHO05D006603 1.2e-11 75.9 107 45.8
SEGI_35364 Sequoiadendron giganteum HOM05D004902 ORTHO05D025756 3.4e-11 74.3 46 65.2
TWI38G0888 Tripterygium wilfordii HOM05D004902 ORTHO05D029739 1.3e-10 72.4 70 62.9
BcaNung03565 Brassica carinata HOM05D004902 ORTHO05D006603 3.2e-09 67.8 68 58.8
HanXRQChr08g0233831 Helianthus annuus HOM05D004902 ORTHO05D006603 5.4e-09 67.0 42 73.8
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 2.1e-08 65.1 196 26.5
RcHm_v2.0_Chr5g0040621 Rosa chinensis HOM05D004902 ORTHO05D006603 2.3e-07 61.6 37 81.1
GSVIVG01021644001 Vitis vinifera HOM05D004902 ORTHO05D024725 1.5e-06 58.9 36 69.4
Lsat_1_v5_gn_0_720 Lactuca sativa HOM05D004902 ORTHO05D029739 2.5e-06 58.2 55 58.2


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