Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0038911 Rosa chinensis HOM05D000653 ORTHO05D008581 1.5e-42 175.6 83 100.0
Prupe.4G210100 Prunus persica HOM05D000653 ORTHO05D008581 2.3e-30 135.2 71 91.5
FAN11G1878 Fragaria x ananassa HOM05D000653 ORTHO05D008581 8.8e-30 133.3 71 91.5
FAN21G1877 Fragaria x ananassa HOM05D000653 ORTHO05D008581 8.8e-30 133.3 71 91.5
FAN25G0396 Fragaria x ananassa HOM05D000653 ORTHO05D008581 8.8e-30 133.3 71 91.5
RcHm_v2.0_Chr5g0039011 Rosa chinensis HOM05D000653 ORTHO05D008581 8.8e-30 133.3 71 91.5
FvH4_3g22370 Fragaria vesca HOM05D000653 ORTHO05D008581 2.6e-29 131.7 71 90.1
MD03G1205600 Malus domestica HOM05D000653 ORTHO05D008581 5.7e-29 130.6 71 87.3
Nn1g03575 Nelumbo nucifera HOM05D000653 ORTHO05D008581 1.3e-28 129.4 71 84.5
PGR031G3287 Punica granatum HOM05D000653 ORTHO05D008581 2.2e-28 128.6 71 83.1
Duzib213G0404 Durio zibethinus HOM05D000653 ORTHO05D008581 3.7e-28 127.9 71 84.5
HanXRQChr08g0220661 Helianthus annuus HOM05D000653 ORTHO05D008581 3.7e-28 127.9 71 85.9
AL8G30310 Arabidopsis lyrata HOM05D000653 ORTHO05D008581 1.1e-27 126.3 71 83.1
AT5G54860 Arabidopsis thaliana HOM05D000653 ORTHO05D008581 1.1e-27 126.3 71 83.1
BcaB08g35853 Brassica carinata HOM05D000653 ORTHO05D008581 1.1e-27 126.3 71 83.1
CARHR268200 Cardamine hirsuta HOM05D000653 ORTHO05D008581 1.1e-27 126.3 71 83.1
Thhalv10013383m.g Eutrema salsugineum HOM05D000653 ORTHO05D008581 1.1e-27 126.3 71 83.1
Duzib268G0251 Durio zibethinus HOM05D000653 ORTHO05D008581 1.4e-27 125.9 71 81.7
Eucgr.F03457 Eucalyptus grandis HOM05D000653 ORTHO05D008581 1.4e-27 125.9 71 84.5
Nn1g07111 Nelumbo nucifera HOM05D000653 ORTHO05D008581 1.4e-27 125.9 71 81.7
Sp6g16830 Schrenkiella parvula HOM05D000653 ORTHO05D008581 1.4e-27 125.9 71 81.7
TAR626G0986 Trochodendron aralioides HOM05D000653 ORTHO05D008581 1.4e-27 125.9 71 81.7
CiPaw.12G128500 Carya illinoinensis HOM05D000653 ORTHO05D008581 2.4e-27 125.2 71 84.5
Gohir.D13G143600 Gossypium hirsutum HOM05D000653 ORTHO05D008581 2.4e-27 125.2 71 80.3
Gorai.013G160400 Gossypium raimondii HOM05D000653 ORTHO05D008581 2.4e-27 125.2 71 80.3
QL08p011510 Quercus lobata HOM05D000653 ORTHO05D008581 2.4e-27 125.2 71 83.1
Sc03g0008710 Simmondsia chinensis HOM05D000653 ORTHO05D008581 2.4e-27 125.2 71 81.7
THA.LOC104817660 Tarenaya hassleriana HOM05D000653 ORTHO05D008581 2.4e-27 125.2 71 81.7
Thecc.07G043000 Theobroma cacao HOM05D000653 ORTHO05D008581 2.4e-27 125.2 71 80.3
Actinidia10723 Actinidia chinensis HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 84.5
Aa31LG3G10780 Aethionema arabicum HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 83.1
arahy.Tifrunner.gnm1.ann1.D18SLP Arachis hypogaea HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 80.3
arahy.Tifrunner.gnm1.ann1.PN5ECJ Arachis hypogaea HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 80.3
BcaC04g20290 Brassica carinata HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 81.7
A10p12200 Brassica napus HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 81.7
C09p45420 Brassica napus HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 81.7
BolC9t57411H Brassica oleracea HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 81.7
BraA10t43316Z Brassica rapa HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 81.7
CSS0008420 Camellia sinensis var. sinensis HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 84.5
Lj6g0014582 Lotus japonicus HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 80.3
GSVIVG01037614001 Vitis vinifera HOM05D000653 ORTHO05D008581 3.1e-27 124.8 71 83.1
Actinidia35334 Actinidia chinensis HOM05D000653 ORTHO05D008581 4.1e-27 124.4 71 83.1
Carub.0008s1516 Capsella rubella HOM05D000653 ORTHO05D008581 4.1e-27 124.4 71 80.3
Migut.H01838 Erythranthe guttata HOM05D000653 ORTHO05D008581 4.1e-27 124.4 71 83.1
Aqoxy3G03171 Aquilegia oxysepala HOM05D000653 ORTHO05D008581 5.3e-27 124.0 71 81.7
Glyma.08G314500 Glycine max HOM05D000653 ORTHO05D008581 5.3e-27 124.0 71 78.9
Gohir.A13G138800 Gossypium hirsutum HOM05D000653 ORTHO05D008581 5.3e-27 124.0 71 80.3
Lalb_Chr20g0113931 Lupinus albus HOM05D000653 ORTHO05D008581 5.3e-27 124.0 71 81.7
Glyma.18G099700 Glycine max HOM05D000653 ORTHO05D008581 7.0e-27 123.6 71 80.3
Hma1.2p1_0673F.1_g201200 Hydrangea macrophylla HOM05D000653 ORTHO05D008581 7.0e-27 123.6 71 83.1
Sabra11G0123200 Salix brachista HOM05D000653 ORTHO05D008581 7.0e-27 123.6 71 81.7
VMungo0540G2289 Vigna mungo HOM05D000653 ORTHO05D008581 7.0e-27 123.6 71 80.3
Lsat_1_v5_gn_1_1820 Lactuca sativa HOM05D000653 ORTHO05D008581 9.1e-27 123.2 71 83.1
RhsimUnG0251600 Rhododendron simsii HOM05D000653 ORTHO05D008581 9.1e-27 123.2 70 82.9
Nitab4.5_0000749g0150 Nicotiana tabacum HOM05D000653 ORTHO05D008581 1.2e-26 122.9 67 86.6
Cpa.g.sc97.29 Carica papaya HOM05D000653 ORTHO05D008581 1.6e-26 122.5 71 80.3
Potri.011G137300 Populus trichocarpa HOM05D000653 ORTHO05D008581 1.6e-26 122.5 71 81.7
SGA_v2.0_scaffold9G05065 Striga asiatica HOM05D000653 ORTHO05D008581 1.6e-26 122.5 70 81.4
Atru.chr2.3387 Acer truncatum HOM05D000653 ORTHO05D008581 2.0e-26 122.1 71 81.7
CANSAT80G0628 Cannabis sativa HOM05D000653 ORTHO05D008581 2.0e-26 122.1 71 80.3
CAN.G882.1 Capsicum annuum HOM05D000653 ORTHO05D008581 2.0e-26 122.1 71 81.7
Cfa020374 Carpinus fangiana HOM05D000653 ORTHO05D008581 2.6e-26 121.7 71 81.7
DCAR_022554 Daucus carota HOM05D000653 ORTHO05D008581 2.6e-26 121.7 71 80.3
Peaxi162Scf01097g00310 Petunia axillaris HOM05D000653 ORTHO05D008581 2.6e-26 121.7 71 81.7
Potri.011G137400 Populus trichocarpa HOM05D000653 ORTHO05D008581 2.6e-26 121.7 71 81.7
Nitab4.5_0000653g0050 Nicotiana tabacum HOM05D000653 ORTHO05D008581 3.5e-26 121.3 67 85.1
Medtr3g051190 Medicago truncatula HOM05D000653 ORTHO05D008581 4.5e-26 120.9 71 78.9
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 5.9e-26 120.6 71 81.7
PGSC0003DMG400001096 Solanum tuberosum HOM05D000653 ORTHO05D008581 5.9e-26 120.6 71 80.3
AUR62026825 Chenopodium quinoa HOM05D000653 ORTHO05D008581 7.7e-26 120.2 71 78.9
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 7.7e-26 120.2 67 85.1
Hund23262 Selenicereus undatus HOM05D000653 ORTHO05D008581 7.7e-26 120.2 71 78.9
TPR.G16570 Trifolium pratense HOM05D000653 ORTHO05D008581 1.0e-25 119.8 71 77.5
Cc05_g13570 Coffea canephora HOM05D000653 ORTHO05D008581 1.3e-25 119.4 71 81.7
Psat5g194120 Pisum sativum HOM05D000653 ORTHO05D008581 1.3e-25 119.4 71 76.1
EL10Ac4g07849 Beta vulgaris HOM05D000653 ORTHO05D008581 1.7e-25 119.0 71 76.1
Solyc12g005140.2 Solanum lycopersicum HOM05D000653 ORTHO05D008581 1.7e-25 119.0 71 81.7
Sopen12g001130 Solanum pennellii HOM05D000653 ORTHO05D008581 1.7e-25 119.0 71 81.7
MBI02_g28328_MAGBIO Magnolia biondii HOM05D000653 ORTHO05D008581 2.2e-25 118.6 71 78.9
PSO210G6519 Papaver somniferum HOM05D000653 ORTHO05D008581 2.9e-25 118.2 71 74.6
PSO832G4309 Papaver somniferum HOM05D000653 ORTHO05D008581 2.9e-25 118.2 71 74.6
TWI38G0314 Tripterygium wilfordii HOM05D000653 ORTHO05D008581 2.9e-25 118.2 71 77.5
Ciclev10008106m.g Citrus clementina HOM05D000653 ORTHO05D008581 3.8e-25 117.9 67 79.1
HanXRQChr11g0336311 Helianthus annuus HOM05D000653 ORTHO05D008581 2.7e-23 111.7 71 76.1
Os01g0243200 Oryza sativa ssp. japonica HOM05D000653 ORTHO05D008581 2.3e-22 108.6 64 75.0
SEGI_10883 Sequoiadendron giganteum HOM05D000653 ORTHO05D008581 2.0e-21 105.5 67 71.6
Zm00001eb122330 Zea mays HOM05D000653 ORTHO05D008581 4.4e-21 104.4 65 73.8
AUR62015737 Chenopodium quinoa HOM05D000653 ORTHO05D008581 5.0e-17 90.9 55 76.4
SMO358G0697 Selaginella moellendorffii HOM05D000653 ORTHO05D008581 8.5e-17 90.1 65 67.7
vmacro09730 Vaccinium macrocarpon HOM05D000653 ORTHO05D008581 2.7e-15 85.1 46 84.8
Atru.chr2.3328 Acer truncatum HOM05D000653 ORTHO05D008581 8.0e-15 83.6 55 74.5
QL09p032928 Quercus lobata HOM05D000653 ORTHO05D008581 8.0e-15 83.6 50 78.0
Lj8A168T98 Lonicera japonica HOM05D000653 ORTHO05D008581 4.0e-14 81.3 43 86.0
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 6.8e-14 80.5 44 84.1
SHI26629 Sapria himalayana HOM05D000653 ORTHO05D008581 5.7e-13 77.4 44 79.5
FAN14G1973 Fragaria x ananassa HOM05D002706 ORTHO05D045850 5.4e-11 70.9 42 81.0
FvH4_6g09050 Fragaria vesca HOM05D014733 ORTHO05D045850 1.6e-10 69.3 42 78.6
Pp3c1_14900 Physcomitrium patens HOM05D000653 ORTHO05D003117 2.7e-10 68.6 67 50.7
Pp3c1_36490 Physcomitrium patens HOM05D000653 ORTHO05D008581 7.7e-10 67.0 67 47.8
Lsat_1_v5_gn_7_109440 Lactuca sativa HOM05D000653 ORTHO05D008581 5.0e-09 64.3 35 82.9
Pp3c18_11000 Physcomitrium patens HOM05D000653 ORTHO05D003117 6.5e-09 63.9 65 46.2
AagrBONN_evm.TU.Sc2ySwM_362.2879 Anthoceros agrestis HOM05D000653 ORTHO05D008581 1.9e-08 62.4 65 44.6
Pp3c21_8500 Physcomitrium patens HOM05D000653 ORTHO05D003117 1.9e-08 62.4 67 44.8
Sc19g0006500 Simmondsia chinensis HOM05D000653 ORTHO05D003117 1.4e-06 56.2 59 49.2


User provided reference genes

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