Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0038421 Rosa chinensis HOM05D001371 ORTHO05D001319 9.8e-178 626.7 320 100.0
RcHm_v2.0_Chr5g0038791 Rosa chinensis HOM05D001371 ORTHO05D001319 3.6e-172 608.2 321 97.5
RcHm_v2.0_Chr5g0038771 Rosa chinensis HOM05D001371 ORTHO05D001319 3.8e-81 305.8 290 62.8
FvH4_3g22300 Fragaria vesca HOM05D001371 ORTHO05D001319 9.4e-64 248.1 313 50.5
RcHm_v2.0_Chr5g0038781 Rosa chinensis HOM05D001371 ORTHO05D001319 1.4e-43 181.0 311 40.2
FAN16G2046 Fragaria x ananassa HOM05D001371 ORTHO05D001319 3.4e-37 159.8 241 44.4
FvH4_3g22321 Fragaria vesca HOM05D001371 ORTHO05D001319 1.1e-35 154.8 322 37.0
FvH4_3g22330 Fragaria vesca HOM05D001371 ORTHO05D001319 1.6e-34 151.0 309 35.6
RcHm_v2.0_Chr5g0038801 Rosa chinensis HOM05D001371 ORTHO05D001319 6.8e-30 135.6 332 37.0
RcHm_v2.0_Chr5g0038381 Rosa chinensis HOM05D001371 ORTHO05D001319 6.4e-28 129.0 233 41.2
RcHm_v2.0_Chr5g0038731 Rosa chinensis HOM05D001371 ORTHO05D001319 7.1e-27 125.6 233 40.8
RcHm_v2.0_Chr5g0038351 Rosa chinensis HOM05D001371 ORTHO05D001319 6.6e-25 119.0 233 39.1
FAN21G0036 Fragaria x ananassa HOM05D001371 ORTHO05D001319 1.2e-21 108.2 320 32.2
FvH4_3g22290 Fragaria vesca HOM05D001371 ORTHO05D001319 1.7e-17 94.4 320 30.6
RcHm_v2.0_Chr5g0038361 Rosa chinensis HOM05D001371 ORTHO05D001319 1.8e-14 84.3 208 33.7
RcHm_v2.0_Chr5g0038741 Rosa chinensis HOM05D001371 ORTHO05D001319 9.0e-14 82.0 208 34.1
MD03G1206300 Malus domestica HOM05D001371 ORTHO05D001319 6.0e-10 69.3 118 38.1
Prupe.4G209700 Prunus persica HOM05D001371 ORTHO05D001319 1.3e-09 68.2 237 27.0
Prupe.4G209800 Prunus persica HOM05D001371 ORTHO05D001319 7.3e-08 62.4 67 43.3
QL08p011808 Quercus lobata HOM05D001371 ORTHO05D001319 9.6e-08 62.0 239 27.2
FvH4_7g03072 Fragaria vesca HOM05D001371 ORTHO05D001319 3.6e-07 60.1 99 36.4
FAN06G0975 Fragaria x ananassa HOM05D001371 ORTHO05D001319 3.6e-07 60.1 99 36.4
RcHm_v2.0_Chr5g0038451 Rosa chinensis HOM05D001371 ORTHO05D001319 4.8e-07 59.7 230 33.9
Sabra16G0286400 Salix brachista HOM05D001371 ORTHO05D001319 4.8e-07 59.7 153 27.5
Rhsim06G0215600 Rhododendron simsii HOM05D001371 ORTHO05D001319 4.0e-06 56.6 105 36.2
FAN03G3315 Fragaria x ananassa HOM05D001371 ORTHO05D001319 5.3e-06 56.2 96 35.4


User provided reference genes

Program Settings