Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 2.4e-196 688.7 361 100.0
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 6.0e-184 647.5 361 92.5
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 1.1e-182 643.3 361 92.5
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.9e-182 642.5 361 92.2
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 8.2e-173 610.5 357 88.2
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 7.4e-166 587.4 361 85.3
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 2.9e-162 575.5 360 84.2
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 6.9e-156 554.3 361 80.6
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 1.7e-154 549.7 362 79.0
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 2.5e-153 545.8 365 76.4
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.6e-152 543.1 361 79.2
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 3.9e-151 538.5 361 77.8
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 1.5e-150 536.6 361 79.5
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 2.6e-150 535.8 355 78.6
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 3.3e-150 535.4 338 80.2
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 3.3e-150 535.4 361 78.1
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 7.4e-150 534.3 375 76.5
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.7e-149 533.1 355 78.6
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.1e-148 530.4 359 76.6
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 2.4e-148 529.3 337 80.1
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 2.4e-148 529.3 337 80.1
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 7.0e-148 527.7 362 76.0
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 9.1e-148 527.3 363 76.3
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.2e-147 526.9 361 77.0
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 4.5e-147 525.0 361 76.2
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 5.9e-147 524.6 361 75.3
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 5.9e-147 524.6 355 78.3
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 2.2e-146 522.7 362 75.1
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 3.8e-146 521.9 333 79.9
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 6.5e-146 521.2 333 79.6
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 1.5e-145 520.0 361 74.5
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 1.5e-145 520.0 362 76.5
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 2.5e-145 519.2 362 75.7
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.5e-145 519.2 362 75.7
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 3.2e-145 518.8 362 75.1
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 3.2e-145 518.8 361 74.5
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 4.7e-144 515.0 362 74.0
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 6.1e-144 514.6 361 75.9
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 8.0e-144 514.2 362 74.6
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 2.3e-143 512.7 346 77.2
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.3e-143 512.7 355 75.2
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 8.8e-143 510.8 367 75.7
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.1e-142 510.4 350 75.4
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.5e-142 510.0 364 74.7
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.5e-142 510.0 362 76.8
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.0e-142 509.6 359 73.8
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 3.3e-142 508.8 366 74.3
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 3.3e-142 508.8 359 73.3
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 9.7e-142 507.3 355 74.4
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 9.7e-142 507.3 362 76.2
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 6.3e-141 504.6 342 76.3
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 8.2e-141 504.2 362 72.4
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 8.2e-141 504.2 359 75.8
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 8.2e-141 504.2 338 78.4
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 8.2e-141 504.2 362 73.5
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 8.2e-141 504.2 366 74.0
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.4e-140 502.7 366 73.8
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.7e-139 499.2 363 73.8
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 3.5e-139 498.8 356 75.3
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 5.9e-139 498.0 352 74.1
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 5.9e-139 498.0 361 74.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 7.7e-139 497.7 367 73.3
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 2.2e-138 496.1 361 72.3
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 2.2e-138 496.1 363 74.1
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 2.2e-138 496.1 359 74.1
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 3.8e-138 495.4 353 73.7
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 5.0e-138 495.0 362 72.7
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 5.0e-138 495.0 362 72.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 5.0e-138 495.0 361 72.9
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 5.0e-138 495.0 348 74.4
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 6.5e-138 494.6 351 73.5
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 1.1e-137 493.8 351 73.5
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 1.1e-137 493.8 349 75.1
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 1.9e-137 493.0 362 72.1
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 1.9e-137 493.0 349 74.5
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 2.5e-137 492.7 361 71.2
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 2.5e-137 492.7 351 73.2
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 3.2e-137 492.3 339 76.1
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 3.2e-137 492.3 362 73.8
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 4.2e-137 491.9 359 73.8
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 3.6e-136 488.8 362 72.9
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 9.8e-134 480.7 363 71.1
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.2e-131 473.8 361 71.7
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 2.0e-131 473.0 365 71.5
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.3e-130 470.3 344 72.1
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 2.5e-129 466.1 298 80.9
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 4.4e-126 455.3 329 70.8
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 6.3e-125 451.4 269 83.6
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 5.0e-122 441.8 269 82.2
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 3.1e-111 406.0 355 62.5
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 5.2e-111 405.2 271 76.4
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 3.5e-107 392.5 352 57.7
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 2.3e-106 389.8 352 57.1
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.3e-98 364.0 334 58.4
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.1e-95 354.4 289 69.2
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.1e-87 327.8 243 72.4
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.9e-81 307.0 242 66.5
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.7e-77 293.9 272 59.2
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 3.1e-71 273.1 346 46.2
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 3.1e-71 273.1 344 45.9
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.5e-70 270.8 228 64.9
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-64 251.1 155 82.6
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 2.4e-63 246.9 305 46.9
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.2e-61 240.4 336 44.3
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.9e-61 240.0 194 64.9
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 1.9e-60 237.3 363 46.0
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 2.7e-59 233.4 193 63.2
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.1e-58 229.2 185 67.0
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 2.2e-48 197.2 163 60.1
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 2.6e-46 190.3 140 69.3
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.3e-42 177.2 158 60.8
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.1e-39 168.3 114 74.6
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 2.4e-39 167.2 264 41.3
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.4e-38 163.3 91 90.1
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 8.0e-27 125.6 133 52.6
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 3.3e-25 120.2 66 89.4
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.7e-21 107.8 144 52.8
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 8.5e-21 105.5 57 89.5
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 6.1e-19 99.4 88 55.7
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 1.3e-13 81.6 46 87.0
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 3.8e-13 80.1 43 93.0


User provided reference genes

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