Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0037391 Rosa chinensis HOM05D000519 ORTHO05D345885 1.8e-66 255.8 127 100.0
HPP92_014273 Vanilla planifolia HOM05D000519 ORTHO05D000959 2.9e-08 62.4 121 34.7
HPP92_014276 Vanilla planifolia HOM05D000519 ORTHO05D000959 1.4e-07 60.1 120 34.2
Duzib128G1701 Durio zibethinus HOM05D000519 ORTHO05D001210 2.5e-07 59.3 100 35.0
HPP92_024487 Vanilla planifolia HOM05D000519 ORTHO05D000959 3.2e-07 58.9 120 33.3
Dinv14880 Davidia involucrata HOM05D000519 ORTHO05D001210 5.5e-07 58.2 83 37.3
Lj6g0026771 Lotus japonicus HOM05D000519 ORTHO05D001210 5.5e-07 58.2 81 35.8
Glyma.15G115300 Glycine max HOM05D000519 ORTHO05D000959 7.2e-07 57.8 115 35.7
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 9.4e-07 57.4 117 35.9
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 9.4e-07 57.4 117 35.9
Thecc.05G122600 Theobroma cacao HOM05D000519 ORTHO05D001210 1.2e-06 57.0 93 32.3
AL6G14920 Arabidopsis lyrata HOM05D000519 ORTHO05D001210 2.1e-06 56.2 97 34.0
CAN.G732.36 Capsicum annuum HOM05D005257 ORTHO05D006425 2.1e-06 56.2 123 29.3
Haze_23548 Corylus avellana HOM05D000519 ORTHO05D001210 2.7e-06 55.8 95 33.7
Sc13g0000890 Simmondsia chinensis HOM05D000519 ORTHO05D001210 2.7e-06 55.8 94 36.2
Cfa019958 Carpinus fangiana HOM05D000519 ORTHO05D001210 3.6e-06 55.5 83 34.9
Haze_20276 Corylus avellana HOM05D000519 ORTHO05D001210 3.6e-06 55.5 83 34.9
Haze_20281 Corylus avellana HOM05D000519 ORTHO05D001210 3.6e-06 55.5 83 34.9
Gohir.A06G154000 Gossypium hirsutum HOM05D000519 ORTHO05D000959 3.6e-06 55.5 122 34.4
SalBow6G4410 Salvia bowleyana HOM05D000519 ORTHO05D001210 3.6e-06 55.5 124 29.8
Aa31LG11G5980 Aethionema arabicum HOM05D000519 ORTHO05D001210 4.7e-06 55.1 79 38.0
AUR62012807 Chenopodium quinoa HOM05D000519 ORTHO05D000959 4.7e-06 55.1 106 34.0
AUR62021846 Chenopodium quinoa HOM05D000519 ORTHO05D000959 4.7e-06 55.1 126 32.5
CiPaw.10G043600 Carya illinoinensis HOM05D000519 ORTHO05D001210 6.1e-06 54.7 83 34.9
Glyma.04G096400 Glycine max HOM05D000519 ORTHO05D000959 6.1e-06 54.7 110 32.7
Glyma.19G206500 Glycine max HOM05D000519 ORTHO05D000959 6.1e-06 54.7 110 32.7
Lsat_1_v5_gn_7_31141 Lactuca sativa HOM05D000519 ORTHO05D001210 6.1e-06 54.7 130 30.8
Cfa010161 Carpinus fangiana HOM05D000519 ORTHO05D001210 7.9e-06 54.3 95 32.6
MELO3C025557.2 Cucumis melo HOM05D000519 ORTHO05D000959 7.9e-06 54.3 124 32.3
Duzib192G0996 Durio zibethinus HOM05D000519 ORTHO05D000959 7.9e-06 54.3 122 34.4
Gohir.D06G160700 Gossypium hirsutum HOM05D000519 ORTHO05D000959 7.9e-06 54.3 123 35.8
Gorai.010G187500 Gossypium raimondii HOM05D000519 ORTHO05D000959 7.9e-06 54.3 123 35.8
Lj2A411T30 Lonicera japonica HOM05D000519 ORTHO05D001210 7.9e-06 54.3 83 36.1
Peaxi162Scf00516g00518 Petunia axillaris HOM05D000519 ORTHO05D001210 7.9e-06 54.3 84 34.5
Sopen03g028040 Solanum pennellii HOM05D000519 ORTHO05D001210 7.9e-06 54.3 120 29.2
PGSC0003DMG400026473 Solanum tuberosum HOM05D000519 ORTHO05D001210 7.9e-06 54.3 88 31.8
GSVIVG01003320001 Vitis vinifera HOM05D000519 ORTHO05D000959 7.9e-06 54.3 120 33.3


User provided reference genes

Program Settings