Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.7e-76 289.3 147 100.0
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.6e-66 256.1 139 92.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 2.5e-64 248.8 127 98.4
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.2e-63 243.8 127 96.1
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.4e-62 242.3 127 95.3
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 5.9e-61 237.7 128 94.5
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.4e-59 233.0 128 93.0
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.3e-55 219.9 127 82.7
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 1.3e-55 219.9 127 83.5
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.4e-49 199.9 127 73.2
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.8e-49 199.5 142 67.6
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 8.8e-49 197.2 127 71.7
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.5e-48 196.4 127 74.8
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.0e-48 196.1 127 74.0
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 2.0e-48 196.1 127 73.2
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 4.4e-48 194.9 127 74.0
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 7.4e-48 194.1 127 70.9
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 7.4e-48 194.1 127 70.9
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 9.7e-48 193.7 127 70.1
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 3.7e-47 191.8 144 68.8
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 3.7e-47 191.8 127 70.1
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 8.2e-47 190.7 144 68.1
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.4e-46 189.9 127 69.3
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 3.1e-46 188.7 127 73.2
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 5.3e-46 188.0 127 69.3
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 7.0e-46 187.6 127 68.5
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 7.0e-46 187.6 144 65.3
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 9.1e-46 187.2 144 67.4
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.5e-45 186.4 144 64.6
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 2.0e-45 186.0 127 72.4
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.0e-45 186.0 127 67.7
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 2.6e-45 185.7 94 98.9
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 2.6e-45 185.7 127 71.7
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 2.6e-45 185.7 127 69.3
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 3.4e-45 185.3 127 71.7
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.4e-45 185.3 127 66.9
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 3.4e-45 185.3 127 68.5
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 5.9e-45 184.5 127 66.1
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 5.9e-45 184.5 127 68.5
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.9e-45 184.5 127 66.9
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 5.9e-45 184.5 127 66.1
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 7.7e-45 184.1 127 67.7
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 1.3e-44 183.3 149 63.1
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.7e-44 183.0 155 58.7
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.7e-44 183.0 144 63.2
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 2.2e-44 182.6 127 68.5
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.2e-44 182.6 148 63.5
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 3.8e-44 181.8 147 63.9
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 6.5e-44 181.0 127 66.9
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 6.5e-44 181.0 142 63.4
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 8.5e-44 180.6 142 62.7
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.9e-43 179.5 127 65.4
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.9e-43 179.5 127 63.8
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.5e-43 179.1 127 64.6
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 4.2e-43 178.3 127 64.6
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 4.2e-43 178.3 128 67.2
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 4.2e-43 178.3 142 62.0
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 5.5e-43 177.9 142 62.0
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 7.2e-43 177.6 127 65.4
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 9.4e-43 177.2 140 62.1
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 9.4e-43 177.2 127 65.4
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.2e-42 176.8 144 62.5
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.6e-42 176.4 127 64.6
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 2.1e-42 176.0 109 76.1
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.1e-42 176.0 127 64.6
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 2.7e-42 175.6 127 63.8
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 2.7e-42 175.6 127 64.6
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 2.7e-42 175.6 127 64.6
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 2.7e-42 175.6 127 64.6
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.7e-42 175.6 144 63.2
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 6.1e-42 174.5 140 60.7
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 6.1e-42 174.5 140 60.7
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 8.0e-42 174.1 127 63.8
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.0e-41 173.7 127 63.8
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.4e-41 173.3 127 63.8
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.8e-41 172.9 129 63.6
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 1.8e-41 172.9 127 66.1
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 3.9e-41 171.8 127 64.6
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.5e-40 169.9 129 63.6
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 2.6e-40 169.1 127 63.0
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 5.7e-40 167.9 142 57.7
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.7e-39 166.4 114 65.8
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.7e-39 166.4 114 65.8
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 6.3e-39 164.5 127 63.0
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 5.3e-38 161.4 127 62.2
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 2.6e-37 159.1 127 58.3
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 7.7e-37 157.5 122 62.3
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.3e-36 156.8 144 56.9
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 4.2e-35 151.8 127 59.8
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.8e-33 146.4 115 66.1
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.2e-32 143.7 94 72.3
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 3.3e-32 142.1 140 55.7
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 5.7e-32 141.4 104 63.5
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 7.5e-32 141.0 129 55.8
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 9.1e-30 134.0 127 57.5
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 4.5e-29 131.7 91 67.0
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.9e-28 129.0 128 46.9
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.9e-28 129.0 98 62.2
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.5e-27 126.7 135 48.1
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.9e-27 126.3 127 53.5
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 7.5e-24 114.4 94 57.4
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 9.8e-24 114.0 128 43.8
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.7e-23 112.1 148 40.5
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.6e-21 106.7 133 43.6
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 5.9e-21 104.8 132 40.2
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 2.0e-16 89.7 56 71.4
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 4.5e-13 78.6 164 35.4
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 1.0e-12 77.4 42 81.0
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 5.0e-12 75.1 57 63.2
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.1e-10 69.7 36 100.0
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 4.7e-10 68.6 108 37.0


User provided reference genes

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