Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0035441 Rosa chinensis HOM05D003275 ORTHO05D346868 3.2e-31 137.9 75 100.0
RcHm_v2.0_Chr1g0326971 Rosa chinensis HOM05D003275 ORTHO05D341450 1.3e-27 125.9 75 93.3
RcHm_v2.0_Chr4g0400641 Rosa chinensis HOM05D003275 ORTHO05D345639 5.3e-18 94.0 54 94.4
RcHm_v2.0_Chr6g0311011 Rosa chinensis HOM05D003275 ORTHO05D003732 7.0e-10 67.0 53 71.7
FvH4_2g31810 Fragaria vesca HOM05D003275 ORTHO05D003732 1.2e-09 66.2 53 69.8
FAN15G3499 Fragaria x ananassa HOM05D003275 ORTHO05D003732 1.2e-09 66.2 53 69.8
FAN24G1665 Fragaria x ananassa HOM05D003275 ORTHO05D003732 1.2e-09 66.2 53 69.8
Prupe.1G411500 Prunus persica HOM05D003275 ORTHO05D003732 2.7e-09 65.1 53 67.9
MD15G1059000 Malus domestica HOM05D003275 ORTHO05D003732 1.0e-08 63.2 53 66.0
MD08G1062700 Malus domestica HOM05D003275 ORTHO05D003732 5.0e-08 60.8 53 64.2
TAR383G0517 Trochodendron aralioides HOM05D003275 ORTHO05D003732 1.1e-07 59.7 53 60.4
Thecc.09G054400 Theobroma cacao HOM05D003275 ORTHO05D003732 1.9e-07 58.9 50 64.0
Duzib168G2080 Durio zibethinus HOM05D003275 ORTHO05D003732 3.2e-07 58.2 50 62.0
Sabra06G0177100 Salix brachista HOM05D003275 ORTHO05D003732 9.4e-07 56.6 53 60.4
Gorai.010G100200 Gossypium raimondii HOM05D003275 ORTHO05D003732 1.2e-06 56.2 53 56.6
Gohir.D06G086800 Gossypium hirsutum HOM05D003275 ORTHO05D003732 2.1e-06 55.5 53 56.6
Manes.03G048000 Manihot esculenta HOM05D003275 ORTHO05D003732 3.6e-06 54.7 51 60.8
BolC9t59327H Brassica oleracea HOM05D003275 ORTHO05D003732 4.7e-06 54.3 62 50.0
Dinv27990 Davidia involucrata HOM05D003275 ORTHO05D003732 4.7e-06 54.3 53 56.6
Gohir.A06G087400 Gossypium hirsutum HOM05D003275 ORTHO05D003732 6.1e-06 53.9 53 54.7
BcaC04g19190 Brassica carinata HOM05D003275 ORTHO05D003732 8.0e-06 53.5 50 58.0
C09p64990 Brassica napus HOM05D003275 ORTHO05D003732 8.0e-06 53.5 52 57.7
QL02p001118 Quercus lobata HOM05D003275 ORTHO05D003732 8.0e-06 53.5 48 64.6


User provided reference genes

Program Settings