Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 2.0e-167 592.4 307 100.0
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 2.1e-145 519.2 339 84.4
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 2.7e-108 396.0 362 64.1
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 5.2e-104 381.7 336 64.0
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 4.0e-96 355.5 341 58.9
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 5.3e-96 355.1 357 57.4
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 1.7e-94 350.1 350 57.4
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 4.9e-94 348.6 362 54.7
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 9.3e-93 344.4 344 55.5
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 1.2e-92 344.0 358 54.5
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 1.3e-91 340.5 350 56.3
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 6.6e-91 338.2 340 55.6
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 1.1e-90 337.4 361 54.6
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 1.5e-90 337.0 357 54.3
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 2.5e-90 336.3 340 57.1
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 3.3e-90 335.9 343 55.1
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 4.3e-90 335.5 342 55.0
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 2.0e-87 326.6 356 52.8
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 5.8e-87 325.1 343 53.9
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 1.3e-86 323.9 345 53.9
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 2.2e-86 323.2 369 52.8
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 4.9e-86 322.0 352 54.3
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 4.6e-84 315.5 342 53.5
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 5.1e-83 312.0 339 53.1
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 1.1e-82 310.8 355 51.0
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 7.4e-82 308.1 356 50.6
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 1.6e-81 307.0 362 50.6
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 8.1e-81 304.7 340 53.2
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 1.4e-80 303.9 356 50.3
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 5.8e-79 298.5 355 49.3
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 5.8e-79 298.5 355 49.9
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 9.6e-74 281.2 355 47.6
RcHm_v2.0_Chr5g0031411 Rosa chinensis HOM05D008293 ORTHO05D010504 2.1e-73 280.0 150 94.7
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 3.7e-73 279.3 271 54.6
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 6.3e-73 278.5 347 48.4
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 1.1e-69 267.7 309 52.4
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 2.7e-68 263.1 340 45.9
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 2.3e-67 260.0 339 46.0
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 5.1e-67 258.8 341 45.7
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 1.5e-66 257.3 341 46.3
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 1.2e-63 247.7 384 43.0
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 2.2e-62 243.4 343 45.8
RcHm_v2.0_Chr7g0194341 Rosa chinensis HOM05D008293 ORTHO05D010504 3.0e-59 233.0 234 62.8
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 2.2e-57 226.9 343 44.6
Cpa.g.sc97.100 Carica papaya HOM05D008293 ORTHO05D010504 1.0e-54 218.0 203 58.1
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 1.5e-50 204.1 286 45.8
Lj1A831T70 Lonicera japonica HOM05D008293 ORTHO05D010504 2.8e-49 199.9 255 49.4
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 2.0e-42 177.2 345 37.4
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 5.7e-42 175.6 324 38.9
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 2.2e-38 163.7 185 51.4
MD10G1199100 Malus domestica HOM05D008293 ORTHO05D010504 2.9e-30 136.7 171 47.4
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 1.6e-23 114.4 162 42.0
Actinidia35215 Actinidia chinensis HOM05D008293 ORTHO05D010504 7.8e-23 112.1 227 40.1
AagrBONN_evm.TU.Sc2ySwM_344.893 Anthoceros agrestis HOM05D008293 ORTHO05D010504 4.4e-18 96.3 133 46.6
Solyc07g062547.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 4.6e-15 86.3 69 68.1
Cfa019577 Carpinus fangiana HOM05D008293 ORTHO05D010504 1.0e-14 85.1 69 65.2
Lj1P831T51 Lonicera japonica HOM05D008293 ORTHO05D010504 6.6e-14 82.4 69 60.9
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 1.5e-10 71.2 54 61.1


User provided reference genes

Program Settings