Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0028901 Rosa chinensis HOM05D005685 ORTHO05D007046 3.9e-30 134.0 63 100.0
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.6e-12 75.5 48 70.8
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 4.8e-12 73.9 43 76.7
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.8e-12 73.9 43 76.7
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.8e-12 73.9 43 76.7
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 1.1e-11 72.8 43 72.1
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.8e-11 72.0 43 74.4
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 9.1e-11 69.7 41 73.2
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 1.1e-08 62.8 50 60.0
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 1.9e-08 62.0 40 67.5
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 2.5e-08 61.6 46 65.2
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 2.5e-08 61.6 46 63.0
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 3.2e-08 61.2 40 70.0
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 4.2e-08 60.8 46 63.0
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 5.5e-08 60.5 41 63.4
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 5.5e-08 60.5 46 58.7
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 5.5e-08 60.5 41 63.4
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 5.5e-08 60.5 43 60.5
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 5.5e-08 60.5 41 65.9
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 5.5e-08 60.5 41 65.9
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 7.2e-08 60.1 41 65.9
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 7.2e-08 60.1 50 58.0
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 9.4e-08 59.7 41 61.0
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 1.2e-07 59.3 46 58.7
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 1.2e-07 59.3 46 58.7
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 1.2e-07 59.3 46 60.9
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 1.2e-07 59.3 40 62.5
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 1.2e-07 59.3 46 60.9
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 1.2e-07 59.3 41 63.4
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 1.2e-07 59.3 41 63.4
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 1.6e-07 58.9 47 57.4
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 2.1e-07 58.5 46 60.9
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 2.1e-07 58.5 46 60.9
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.1e-07 58.5 43 58.1
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 2.1e-07 58.5 50 54.0
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 2.1e-07 58.5 40 62.5
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 2.7e-07 58.2 40 60.0
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 3.6e-07 57.8 41 61.0
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 3.6e-07 57.8 40 62.5
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 4.6e-07 57.4 41 58.5
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 4.6e-07 57.4 41 58.5
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 4.6e-07 57.4 44 56.8
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 4.6e-07 57.4 43 58.1
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 4.6e-07 57.4 41 53.7
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 4.6e-07 57.4 47 53.2
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 6.1e-07 57.0 46 58.7
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 6.1e-07 57.0 46 58.7
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 6.1e-07 57.0 40 62.5
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 6.1e-07 57.0 46 58.7
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 7.9e-07 56.6 38 68.4
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 7.9e-07 56.6 49 55.1
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 7.9e-07 56.6 41 61.0
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 1.0e-06 56.2 43 58.1
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 1.0e-06 56.2 42 59.5
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 1.4e-06 55.8 54 48.1
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 1.8e-06 55.5 41 63.4
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 1.8e-06 55.5 46 56.5
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 2.3e-06 55.1 40 62.5
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 2.3e-06 55.1 45 57.8
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 2.3e-06 55.1 45 57.8
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 3.0e-06 54.7 43 58.1
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 3.9e-06 54.3 40 57.5
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 3.9e-06 54.3 38 63.2
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 5.1e-06 53.9 40 60.0
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 5.1e-06 53.9 40 60.0
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 5.1e-06 53.9 36 66.7
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 6.7e-06 53.5 46 52.2
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 8.8e-06 53.1 50 54.0
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 8.8e-06 53.1 47 53.2


User provided reference genes

Program Settings