Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0028541 Rosa chinensis HOM05D000051 ORTHO05D000015 1.5e-104 382.9 191 100.0
RcHm_v2.0_Chr5g0028521 Rosa chinensis HOM05D000051 ORTHO05D000015 2.1e-26 123.2 181 44.8
RcHm_v2.0_Chr5g0028551 Rosa chinensis HOM05D000051 ORTHO05D000015 2.1e-26 123.2 186 43.0
RcHm_v2.0_Chr5g0028581 Rosa chinensis HOM05D000051 ORTHO05D000015 3.3e-24 115.9 181 40.9
FvH4_3g17160 Fragaria vesca HOM05D000051 ORTHO05D000015 5.3e-22 108.6 186 39.8
FvH4_3g17190 Fragaria vesca HOM05D000051 ORTHO05D000015 7.0e-22 108.2 176 39.8
FAN16G1794 Fragaria x ananassa HOM05D000100 ORTHO05D000052 7.0e-22 108.2 176 39.8
Prupe.4G158900 Prunus persica HOM05D000051 ORTHO05D000015 1.2e-21 107.5 182 37.9
FAN11G1258 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.0e-21 106.7 176 39.2
MD11G1266900 Malus domestica HOM05D000051 ORTHO05D000015 4.5e-21 105.5 178 40.4
FAN11G0348 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.7e-21 104.8 177 41.8
FvH4_2g40800 Fragaria vesca HOM05D000051 ORTHO05D000015 1.7e-20 103.6 176 40.3
Prupe.4G158800 Prunus persica HOM05D000051 ORTHO05D000015 1.5e-19 100.5 185 37.8
RcHm_v2.0_Chr5g0028511 Rosa chinensis HOM05D000051 ORTHO05D000015 1.5e-19 100.5 177 39.5
FAN16G0886 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.5e-19 99.8 177 37.9
RcHm_v2.0_Chr5g0028391 Rosa chinensis HOM05D000051 ORTHO05D000015 3.6e-18 95.9 191 37.2
FvH4_3g18021 Fragaria vesca HOM05D000051 ORTHO05D000015 8.0e-18 94.7 172 39.0
FAN11G1423 Fragaria x ananassa HOM05D000051 ORTHO05D008292 8.0e-18 94.7 172 39.0
FAN28G2792 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.0e-17 94.4 177 39.0
FvH4_1g00860 Fragaria vesca HOM05D000051 ORTHO05D000015 1.4e-17 94.0 173 39.9
FAN23G2828 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.7e-17 91.7 173 39.9
RcHm_v2.0_Chr5g0028411 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-16 90.9 183 37.2
FvH4_1g09890 Fragaria vesca HOM05D000051 ORTHO05D000015 1.5e-16 90.5 180 37.2
FvH4_3g33400 Fragaria vesca HOM05D000051 ORTHO05D000015 1.5e-16 90.5 173 41.0
FAN11G3894 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.6e-16 89.7 164 41.5
FAN25G1937 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.6e-16 89.7 173 39.9
RcHm_v2.0_Chr7g0237071 Rosa chinensis HOM05D000051 ORTHO05D000015 2.6e-16 89.7 177 36.2
FAN16G3673 Fragaria x ananassa HOM05D000051 ORTHO05D000015 5.7e-16 88.6 173 40.5
FAN19G2798 Fragaria x ananassa HOM05D000051 ORTHO05D010714 7.5e-16 88.2 180 36.1
FAN25G2060 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.3e-15 87.4 185 36.2
MD11G1266000 Malus domestica HOM05D000051 ORTHO05D000015 1.3e-15 87.4 183 36.6
FAN20G2836 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.2e-15 86.7 191 35.1
FAN25G3081 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.8e-15 86.3 185 36.2
FAN11G0701 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.3e-15 85.1 189 34.9
RcHm_v2.0_Chr5g0028401 Rosa chinensis HOM05D000051 ORTHO05D000015 1.4e-14 84.0 175 38.9
RcHm_v2.0_Chr5g0028471 Rosa chinensis HOM05D000051 ORTHO05D000015 1.8e-14 83.6 175 36.0
MD11G1266800 Malus domestica HOM05D000051 ORTHO05D000015 5.3e-14 82.0 184 32.1
MD11G1267000 Malus domestica HOM05D000051 ORTHO05D000015 5.3e-14 82.0 172 37.2
RcHm_v2.0_Chr5g0028481 Rosa chinensis HOM05D000051 ORTHO05D000015 7.0e-14 81.6 177 38.4
FvH4_3g17060 Fragaria vesca HOM05D000051 ORTHO05D000015 9.1e-14 81.3 189 34.4
FAN25G3744 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-13 80.9 107 51.4
FvH4_1g01500 Fragaria vesca HOM05D000051 ORTHO05D000015 2.0e-13 80.1 171 36.8
FAN23G0111 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.7e-13 79.7 177 36.2
FAN25G0012 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.7e-13 79.7 176 34.7
RcHm_v2.0_Chr5g0060771 Rosa chinensis HOM05D000051 ORTHO05D000015 5.9e-13 78.6 187 35.3
FAN16G1515 Fragaria x ananassa HOM05D015327 ORTHO05D019145 7.7e-13 78.2 171 33.3
FAN28G0970 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.7e-13 78.2 173 35.8
FvH4_3g17061 Fragaria vesca HOM05D000051 ORTHO05D000015 2.2e-12 76.6 175 35.4
FvH4_3g17161 Fragaria vesca HOM05D000051 ORTHO05D000015 2.9e-12 76.3 98 46.9
FvH4_3g21190 Fragaria vesca HOM05D000051 ORTHO05D000015 2.9e-12 76.3 189 36.0
RcHm_v2.0_Chr4g0417401 Rosa chinensis HOM05D000051 ORTHO05D000015 3.8e-12 75.9 170 35.9
FvH4_3g17080 Fragaria vesca HOM05D000051 ORTHO05D000015 5.0e-12 75.5 175 35.4
FAN25G2557 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.5e-12 74.7 190 32.6
FAN28G2620 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.1e-11 74.3 182 35.7
MD11G1256200 Malus domestica HOM05D000051 ORTHO05D000015 1.1e-11 74.3 176 34.1
RcHm_v2.0_Chr4g0417391 Rosa chinensis HOM05D000051 ORTHO05D000015 1.5e-11 73.9 173 35.3
FvH4_1g01470 Fragaria vesca HOM05D000051 ORTHO05D000015 1.9e-11 73.6 149 39.6
FAN26G3357 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.9e-11 73.6 180 35.0
Prupe.4G158700 Prunus persica HOM05D000051 ORTHO05D000015 1.9e-11 73.6 85 51.8
RcHm_v2.0_Chr5g0028461 Rosa chinensis HOM05D000051 ORTHO05D000015 1.9e-11 73.6 179 34.6
FvH4_3g17100 Fragaria vesca HOM05D000051 ORTHO05D000015 4.2e-11 72.4 177 34.5
FAN11G3946 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.2e-11 72.4 177 34.5
FvH4_3g17580 Fragaria vesca HOM05D000051 ORTHO05D000015 5.5e-11 72.0 190 33.7
FAN16G3202 Fragaria x ananassa HOM05D000051 ORTHO05D000015 9.4e-11 71.2 190 33.7
FAN21G3599 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-10 70.9 99 43.4
RcHm_v2.0_Chr4g0417361 Rosa chinensis HOM05D000051 ORTHO05D022692 1.2e-10 70.9 170 34.1
RcHm_v2.0_Chr6g0304711 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-10 70.9 183 33.9
MD03G1252900 Malus domestica HOM05D000051 ORTHO05D000015 1.6e-10 70.5 189 32.8
FAN08G2405 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.1e-10 70.1 177 32.2
MD11G1274900 Malus domestica HOM05D000051 ORTHO05D000015 2.1e-10 70.1 187 32.1
MD03G1246000 Malus domestica HOM05D000051 ORTHO05D000015 4.7e-10 68.9 181 33.1
Prupe.4G151700 Prunus persica HOM05D000051 ORTHO05D000015 8.0e-10 68.2 187 34.2
MD11G1266700 Malus domestica HOM05D000051 ORTHO05D000015 1.0e-09 67.8 179 32.4
MD03G1253200 Malus domestica HOM05D000051 ORTHO05D000015 1.4e-09 67.4 187 31.6
RcHm_v2.0_Chr5g0029291 Rosa chinensis HOM05D000051 ORTHO05D000015 1.4e-09 67.4 192 32.3
MD03G1253700 Malus domestica HOM05D000051 ORTHO05D000015 2.3e-09 66.6 172 33.7
MD03G1255400 Malus domestica HOM05D000051 ORTHO05D000015 2.3e-09 66.6 173 31.8
FvH4_3g33370 Fragaria vesca HOM05D000051 ORTHO05D000015 3.0e-09 66.2 177 32.8
FAN19G0896 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.8e-09 65.1 182 33.0
FvH4_3g17581 Fragaria vesca HOM05D000051 ORTHO05D000015 1.2e-08 64.3 183 30.6
FAN11G2886 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-08 64.3 183 30.6
MD11G1275300 Malus domestica HOM05D000051 ORTHO05D000015 1.2e-08 64.3 98 42.9
RcHm_v2.0_Chr2g0115721 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-08 64.3 180 35.6
RcHm_v2.0_Chr5g0060761 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-08 64.3 170 33.5
FvH4_3g33390 Fragaria vesca HOM05D000051 ORTHO05D000015 1.5e-08 63.9 181 32.0
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 2.0e-08 63.5 180 32.8
RcHm_v2.0_Chr5g0028241 Rosa chinensis HOM05D000051 ORTHO05D000015 2.0e-08 63.5 180 33.9
RcHm_v2.0_Chr5g0028431 Rosa chinensis HOM05D000051 ORTHO05D000015 2.0e-08 63.5 179 33.0
FvH4_3g33430 Fragaria vesca HOM05D000051 ORTHO05D000015 3.4e-08 62.8 173 31.8
FvH4_7g28000 Fragaria vesca HOM05D000051 ORTHO05D000015 3.4e-08 62.8 185 33.0
FAN10G3157 Fragaria x ananassa HOM05D000051 ORTHO05D000015 9.8e-08 61.2 179 30.2
RcHm_v2.0_Chr4g0387591 Rosa chinensis HOM05D000051 ORTHO05D000015 9.8e-08 61.2 195 31.8
FAN03G0619 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.3e-07 60.8 185 32.4
FvH4_3g17062 Fragaria vesca HOM05D000051 ORTHO05D000015 1.7e-07 60.5 103 38.8
RcHm_v2.0_Chr5g0028451 Rosa chinensis HOM05D000051 ORTHO05D000015 1.7e-07 60.5 171 33.3
FAN03G3040 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.8e-07 59.7 174 32.2
FAN20G0264 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.8e-07 59.7 170 32.9
Prupe.4G160900 Prunus persica HOM05D000051 ORTHO05D000015 2.8e-07 59.7 180 32.8
RcHm_v2.0_Chr5g0040081 Rosa chinensis HOM05D000051 ORTHO05D000015 3.7e-07 59.3 176 33.0
FvH4_2g37070 Fragaria vesca HOM05D000051 ORTHO05D000015 6.3e-07 58.5 184 29.9
FAN12G1339 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.3e-07 58.5 196 30.6
FAN16G1403 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.3e-07 58.2 44 59.1
FvH4_3g21162 Fragaria vesca HOM05D000051 ORTHO05D000015 1.1e-06 57.8 173 32.9
RcHm_v2.0_Chr5g0028261 Rosa chinensis HOM05D000051 ORTHO05D000015 1.1e-06 57.8 124 36.3
FAN06G4287 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.4e-06 57.4 185 31.9
FAN17G0415 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.4e-06 57.4 195 29.2
RcHm_v2.0_Chr5g0059941 Rosa chinensis HOM05D000051 ORTHO05D000015 1.8e-06 57.0 101 42.6
RcHm_v2.0_Chr5g0059951 Rosa chinensis HOM05D000051 ORTHO05D000015 1.8e-06 57.0 96 44.8
RcHm_v2.0_Chr4g0417411 Rosa chinensis HOM05D000051 ORTHO05D000015 2.4e-06 56.6 168 32.1
FvH4_5g35600 Fragaria vesca HOM05D000051 ORTHO05D000015 3.1e-06 56.2 99 39.4
FvH4_7g28011 Fragaria vesca HOM05D000051 ORTHO05D000015 3.1e-06 56.2 176 33.0
RcHm_v2.0_Chr5g0028201 Rosa chinensis HOM05D000051 ORTHO05D000015 3.1e-06 56.2 180 32.8
FvH4_3g33401 Fragaria vesca HOM05D012937 ORTHO05D000015 7.0e-06 55.1 107 36.4
FvH4_7g28030 Fragaria vesca HOM05D000918 ORTHO05D000015 7.0e-06 55.1 95 37.9
FAN25G1245 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.0e-06 55.1 108 38.0
FAN28G2657 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.0e-06 55.1 100 42.0
FAN18G4561 Fragaria x ananassa HOM05D000051 ORTHO05D000015 9.1e-06 54.7 99 38.4
FAN24G1734 Fragaria x ananassa HOM05D000051 ORTHO05D046548 9.1e-06 54.7 170 31.8


User provided reference genes

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