Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0028311 Rosa chinensis HOM05D006849 ORTHO05D003348 3.8e-63 244.6 118 100.0
RcHm_v2.0_Chr5g0004901 Rosa chinensis HOM05D006849 ORTHO05D003348 6.2e-29 131.0 73 75.3
RcHm_v2.0_Chr2g0135141 Rosa chinensis HOM05D006849 ORTHO05D003348 7.9e-16 87.4 73 47.9
RcHm_v2.0_Chr1g0371171 Rosa chinensis HOM05D006849 ORTHO05D003348 1.8e-15 86.3 77 46.8
RcHm_v2.0_Chr7g0206181 Rosa chinensis HOM05D006849 ORTHO05D003348 5.1e-15 84.7 73 46.6
RcHm_v2.0_Chr3g0491361 Rosa chinensis HOM05D006849 ORTHO05D003348 1.5e-14 83.2 73 46.6
RcHm_v2.0_Chr1g0379271 Rosa chinensis HOM05D006849 ORTHO05D003348 4.3e-14 81.6 72 48.6
RcHm_v2.0_Chr2g0133251 Rosa chinensis HOM05D006849 ORTHO05D003348 9.6e-14 80.5 73 45.2
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.3e-13 80.1 88 45.5
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 2.1e-13 79.3 73 43.8
RcHm_v2.0_Chr2g0174211 Rosa chinensis HOM05D006849 ORTHO05D003348 2.1e-13 79.3 90 38.9
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 2.1e-13 79.3 73 43.8
FAN06G4964 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.8e-13 79.0 88 44.3
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 8.1e-13 77.4 71 47.9
FAN06G0436 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.8e-11 71.2 98 39.8
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 1.7e-10 69.7 73 41.1
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.9e-10 68.2 73 38.4
MD17G1262000 Malus domestica HOM05D006849 ORTHO05D003348 8.4e-10 67.4 73 39.7
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 3.2e-09 65.5 71 40.8
FAN15G3621 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.2e-09 65.5 71 40.8
FAN16G1806 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.2e-09 65.5 71 40.8
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.2e-09 65.5 71 40.8
FAN23G1437 Fragaria x ananassa HOM05D000005 ORTHO05D003348 4.2e-09 65.1 70 40.0
FvH4_1g07041 Fragaria vesca HOM05D007856 ORTHO05D003348 1.2e-08 63.5 70 38.6
FAN21G0042 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.5e-08 62.0 68 35.3
MD08G1229500 Malus domestica HOM05D006849 ORTHO05D003348 3.5e-08 62.0 78 32.1
FvH4_2g22171 Fragaria vesca HOM05D006849 ORTHO05D003348 1.3e-07 60.1 49 49.0
FvH4_6g08820 Fragaria vesca HOM05D007856 ORTHO05D003348 1.9e-06 56.2 77 35.1
MD05G1167800 Malus domestica HOM05D006849 ORTHO05D003348 1.9e-06 56.2 75 33.3
FAN26G2587 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.3e-06 55.5 77 35.1
MD10G1198900 Malus domestica HOM05D006849 ORTHO05D003348 4.3e-06 55.1 48 43.8


User provided reference genes

Program Settings