Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0026451 Rosa chinensis HOM05D003775 ORTHO05D004314 2.2e-45 185.3 93 100.0
RcHm_v2.0_Chr1g0319451 Rosa chinensis HOM05D003775 ORTHO05D004314 1.3e-21 106.3 82 70.7
FAN01G0886 Fragaria x ananassa HOM05D003775 ORTHO05D004314 5.1e-18 94.4 58 81.0
FvH4_7g02050 Fragaria vesca HOM05D003775 ORTHO05D004314 1.1e-17 93.2 58 79.3
FAN10G1046 Fragaria x ananassa HOM05D003775 ORTHO05D004314 1.5e-17 92.8 58 79.3
FAN06G3050 Fragaria x ananassa HOM05D003775 ORTHO05D004314 1.9e-17 92.4 58 77.6
MD07G1027400 Malus domestica HOM05D003775 ORTHO05D004314 2.4e-12 75.5 58 69.0
MD02G1296700 Malus domestica HOM05D003775 ORTHO05D004314 9.3e-12 73.6 58 65.5
Prupe.2G027700 Prunus persica HOM05D003775 ORTHO05D004314 1.6e-11 72.8 83 55.4
Prupe.6G151000 Prunus persica HOM05D003775 ORTHO05D004314 2.1e-11 72.4 58 67.2
Prupe.3G154500 Prunus persica HOM05D003775 ORTHO05D004314 1.9e-09 65.9 83 53.0
QL04p013175 Quercus lobata HOM05D003775 ORTHO05D004314 8.1e-08 60.5 58 55.2
Cfa010842 Carpinus fangiana HOM05D003775 ORTHO05D004314 1.4e-07 59.7 58 55.2
Haze_03108 Corylus avellana HOM05D003775 ORTHO05D004314 9.0e-07 57.0 58 56.9
COL.COLO4_25844 Corchorus olitorius HOM05D003775 ORTHO05D004314 1.2e-06 56.6 56 53.6
Glyma.12G011800 Glycine max HOM05D003775 ORTHO05D004314 2.6e-06 55.5 60 53.3
arahy.Tifrunner.gnm1.ann1.F7MMZ3 Arachis hypogaea HOM05D003775 ORTHO05D004314 4.4e-06 54.7 50 56.0
Glyma.09G225200 Glycine max HOM05D003775 ORTHO05D004314 4.4e-06 54.7 55 56.4
arahy.Tifrunner.gnm1.ann1.IE4AJN Arachis hypogaea HOM05D003775 ORTHO05D004314 7.6e-06 53.9 78 41.0
Duzib106G0584 Durio zibethinus HOM05D003775 ORTHO05D004314 7.6e-06 53.9 57 49.1
THA.LOC104819115 Tarenaya hassleriana HOM05D003775 ORTHO05D004314 7.6e-06 53.9 57 52.6
Gohir.D06G164900 Gossypium hirsutum HOM05D003775 ORTHO05D004314 9.9e-06 53.5 85 43.5
Gorai.010G192300 Gossypium raimondii HOM05D003775 ORTHO05D004314 9.9e-06 53.5 85 43.5


User provided reference genes

Program Settings