Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0025421 Rosa chinensis HOM05D000013 ORTHO05D000011 8.6e-44 179.9 87 100.0
RcHm_v2.0_Chr5g0025521 Rosa chinensis HOM05D000013 ORTHO05D000011 1.9e-19 99.0 71 70.4
FvH4_3g15120 Fragaria vesca HOM05D000013 ORTHO05D000011 3.3e-19 98.2 72 69.4
RcHm_v2.0_Chr5g0025571 Rosa chinensis HOM05D000013 ORTHO05D000011 7.3e-19 97.1 74 67.6
RcHm_v2.0_Chr5g0025451 Rosa chinensis HOM05D000013 ORTHO05D000011 2.4e-14 82.0 71 63.4
RcHm_v2.0_Chr5g0025101 Rosa chinensis HOM05D000013 ORTHO05D000011 1.6e-13 79.3 71 62.0
RcHm_v2.0_Chr5g0025131 Rosa chinensis HOM05D000013 ORTHO05D000011 3.5e-13 78.2 71 60.6
RcHm_v2.0_Chr5g0025381 Rosa chinensis HOM05D000013 ORTHO05D000011 4.6e-13 77.8 71 60.6
RcHm_v2.0_Chr5g0025211 Rosa chinensis HOM05D000013 ORTHO05D000011 7.8e-13 77.0 75 56.0
RcHm_v2.0_Chr5g0025321 Rosa chinensis HOM05D000013 ORTHO05D000011 1.0e-12 76.6 73 58.9
RcHm_v2.0_Chr5g0025041 Rosa chinensis HOM05D000013 ORTHO05D000011 3.0e-12 75.1 77 54.5
RcHm_v2.0_Chr5g0025051 Rosa chinensis HOM05D000013 ORTHO05D000011 3.0e-12 75.1 75 60.0
FAN11G2139 Fragaria x ananassa HOM05D000013 ORTHO05D000011 3.9e-12 74.7 72 58.3
Prupe.4G134900 Prunus persica HOM05D000013 ORTHO05D000011 5.1e-12 74.3 74 56.8
RcHm_v2.0_Chr5g0025531 Rosa chinensis HOM05D000013 ORTHO05D000011 6.6e-12 73.9 71 59.2
FAN11G1270 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.5e-11 72.8 74 56.8
RcHm_v2.0_Chr5g0024871 Rosa chinensis HOM05D000013 ORTHO05D000011 2.5e-11 72.0 72 51.4
FvH4_3g15080 Fragaria vesca HOM05D000013 ORTHO05D000011 5.6e-11 70.9 74 55.4
RcHm_v2.0_Chr4g0410521 Rosa chinensis HOM05D000013 ORTHO05D000011 7.3e-11 70.5 78 52.6
FAN16G1277 Fragaria x ananassa HOM05D000013 ORTHO05D000011 9.6e-11 70.1 75 52.0
FAN16G1341 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.3e-10 69.7 74 55.4
Prupe.4G135100 Prunus persica HOM05D000013 ORTHO05D000011 2.8e-10 68.6 67 55.2
Prupe.4G135400 Prunus persica HOM05D000013 ORTHO05D000011 3.6e-10 68.2 76 59.2
FAN11G2545 Fragaria x ananassa HOM05D000013 ORTHO05D000011 4.8e-10 67.8 78 50.0
RcHm_v2.0_Chr5g0025071 Rosa chinensis HOM05D000013 ORTHO05D049560 4.8e-10 67.8 74 51.4
FAN11G3251 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.1e-09 66.6 73 53.4
FAN16G1724 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.1e-09 66.6 72 52.8
FAN21G1204 Fragaria x ananassa HOM05D000013 ORTHO05D000011 2.4e-09 65.5 72 52.8
RcHm_v2.0_Chr5g0025031 Rosa chinensis HOM05D000013 ORTHO05D000011 2.4e-09 65.5 77 51.9
Prupe.4G135500 Prunus persica HOM05D000013 ORTHO05D000011 5.3e-09 64.3 74 55.4
FAN16G3392 Fragaria x ananassa HOM05D000013 ORTHO05D000011 9.0e-09 63.5 73 52.1
MD10G1207500 Malus domestica HOM05D000013 ORTHO05D000011 9.0e-09 63.5 78 47.4
FvH4_3g15140 Fragaria vesca HOM05D000013 ORTHO05D000011 2.0e-08 62.4 43 72.1
RcHm_v2.0_Chr5g0024971 Rosa chinensis HOM05D000013 ORTHO05D000011 2.6e-08 62.0 74 48.6
RcHm_v2.0_Chr5g0024831 Rosa chinensis HOM05D000013 ORTHO05D000011 3.4e-08 61.6 74 48.6
RcHm_v2.0_Chr5g0024951 Rosa chinensis HOM05D000013 ORTHO05D000011 3.4e-08 61.6 74 48.6
MD05G1227500 Malus domestica HOM05D000013 ORTHO05D000011 4.4e-08 61.2 74 50.0
Gohir.A05G130700 Gossypium hirsutum HOM05D000013 ORTHO05D000011 5.8e-08 60.8 72 47.2
FAN21G3779 Fragaria x ananassa HOM05D000013 ORTHO05D000011 7.6e-08 60.5 67 50.7
RcHm_v2.0_Chr5g0024921 Rosa chinensis HOM05D000013 ORTHO05D000011 1.7e-07 59.3 74 47.3
MD10G1208000 Malus domestica HOM05D000013 ORTHO05D000011 2.2e-07 58.9 73 47.9
RcHm_v2.0_Chr5g0024901 Rosa chinensis HOM05D000013 ORTHO05D000011 2.2e-07 58.9 74 47.3
MD05G1227200 Malus domestica HOM05D000013 ORTHO05D000011 2.9e-07 58.5 71 52.1
Nn8g39191 Nelumbo nucifera HOM05D000013 ORTHO05D000011 2.9e-07 58.5 72 48.6
Prupe.4G135600 Prunus persica HOM05D000013 ORTHO05D000011 3.8e-07 58.2 73 52.1
Prupe.4G135000 Prunus persica HOM05D000013 ORTHO05D000011 6.4e-07 57.4 74 44.6
MD05G1227400 Malus domestica HOM05D000013 ORTHO05D000011 8.4e-07 57.0 76 48.7
MD10G1207000 Malus domestica HOM05D000013 ORTHO05D000011 1.4e-06 56.2 71 50.7
MD05G1227300 Malus domestica HOM05D000013 ORTHO05D000011 1.9e-06 55.8 77 48.1
Phvul.001G233100 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 3.2e-06 55.1 72 44.4
QL04p082408 Quercus lobata HOM05D000013 ORTHO05D000011 3.2e-06 55.1 72 45.8
FvH4_3g15090 Fragaria vesca HOM05D000013 ORTHO05D000011 4.2e-06 54.7 86 43.0
QL05p022956 Quercus lobata HOM05D000013 ORTHO05D000011 4.2e-06 54.7 72 45.8
MD05G1227000 Malus domestica HOM05D000013 ORTHO05D000011 5.4e-06 54.3 73 46.6
TAR624G0340 Trochodendron aralioides HOM05D000013 ORTHO05D000011 5.4e-06 54.3 72 38.9
Nn8g39196 Nelumbo nucifera HOM05D000013 ORTHO05D000011 7.1e-06 53.9 74 43.2


User provided reference genes

Program Settings