Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0021391 Rosa chinensis HOM05D008511 ORTHO05D010691 7.1e-139 497.3 255 100.0
FvH4_3g13150 Fragaria vesca HOM05D008511 ORTHO05D010691 5.0e-116 421.4 257 87.9
FAN21G0240 Fragaria x ananassa HOM05D008511 ORTHO05D010691 5.0e-108 394.8 245 86.1
FAN16G0518 Fragaria x ananassa HOM05D008511 ORTHO05D010691 6.1e-106 387.9 242 86.4
Prupe.4G119000 Prunus persica HOM05D008511 ORTHO05D010691 1.8e-102 376.3 256 77.7
MD05G1244600 Malus domestica HOM05D008511 ORTHO05D010691 8.5e-92 340.9 250 74.0
CiPaw.10G106900 Carya illinoinensis HOM05D008511 ORTHO05D010691 2.3e-76 289.7 256 60.9
QL11p011849 Quercus lobata HOM05D008511 ORTHO05D010691 2.3e-73 279.6 249 61.8
Haze_05233 Corylus avellana HOM05D008511 ORTHO05D010691 2.6e-72 276.2 209 69.4
CANSAT35G2052 Cannabis sativa HOM05D008511 ORTHO05D010691 7.3e-67 258.1 230 60.9
Manes.03G071600 Manihot esculenta HOM05D008511 ORTHO05D010691 2.8e-58 229.6 230 54.8
Potri.001G075700 Populus trichocarpa HOM05D008511 ORTHO05D010691 1.4e-57 227.3 262 50.8
TAR624G0648 Trochodendron aralioides HOM05D008511 ORTHO05D010691 1.8e-57 226.9 239 54.0
TWI38G1802 Tripterygium wilfordii HOM05D008511 ORTHO05D010691 6.8e-57 224.9 232 54.3
CsaV3_1G010050 Cucumis sativus L. HOM05D008511 ORTHO05D010691 1.2e-56 224.2 233 53.6
Cpa.g.sc30.92 Carica papaya HOM05D008511 ORTHO05D010691 3.4e-56 222.6 205 57.1
Atru.chr10.265 Acer truncatum HOM05D008511 ORTHO05D010691 2.2e-55 219.9 241 53.1
Gohir.A12G050000 Gossypium hirsutum HOM05D008511 ORTHO05D010691 2.2e-55 219.9 266 50.4
Dinv31195 Davidia involucrata HOM05D008511 ORTHO05D010691 8.3e-55 218.0 257 50.6
Thecc.02G002800 Theobroma cacao HOM05D008511 ORTHO05D010691 1.1e-54 217.6 263 51.7
Sed0008274 Sechium edule HOM05D008511 ORTHO05D010691 2.7e-53 213.0 208 53.8
ClCG03G004120 Citrullus lanatus HOM05D008511 ORTHO05D010691 7.8e-53 211.5 253 51.8
CAN.G809.39 Capsicum annuum HOM05D008511 ORTHO05D010691 2.3e-52 209.9 251 46.6
Nitab4.5_0000844g0310 Nicotiana tabacum HOM05D008511 ORTHO05D010691 4.3e-51 205.7 238 48.7
Duzib132G0693 Durio zibethinus HOM05D008511 ORTHO05D010691 5.6e-51 205.3 252 51.6
Nn7g38379 Nelumbo nucifera HOM05D008511 ORTHO05D010691 5.6e-51 205.3 208 53.8
Nitab4.5_0000632g0180 Nicotiana tabacum HOM05D008511 ORTHO05D010691 7.3e-51 204.9 252 46.8
Gohir.D12G048400 Gossypium hirsutum HOM05D008511 ORTHO05D010691 9.5e-51 204.5 265 47.9
Gorai.008G051400 Gossypium raimondii HOM05D008511 ORTHO05D010691 8.1e-50 201.4 266 47.4
DCAR_007773 Daucus carota HOM05D008511 ORTHO05D010691 1.9e-46 190.3 220 48.6
Aqoxy2G01550 Aquilegia oxysepala HOM05D008511 ORTHO05D010691 1.6e-45 187.2 208 49.5
Sc24g0002900 Simmondsia chinensis HOM05D008511 ORTHO05D010691 9.6e-43 177.9 221 45.2
SGA_v2.0_scaffold168G38543 Striga asiatica HOM05D008511 ORTHO05D010691 2.8e-42 176.4 261 43.3
MBI02_g25824_MAGBIO Magnolia biondii HOM05D008511 ORTHO05D010691 3.1e-41 172.9 254 43.7
arahy.Tifrunner.gnm1.ann1.5RH3SU Arachis hypogaea HOM05D008511 ORTHO05D010691 1.2e-40 171.0 248 42.7
Oeu010662.1 Olea europaea HOM05D008511 ORTHO05D010691 1.5e-40 170.6 217 46.1
arahy.Tifrunner.gnm1.ann1.LWVG2R Arachis hypogaea HOM05D008511 ORTHO05D010691 2.0e-40 170.2 251 42.2
Cfa001274 Carpinus fangiana HOM05D008511 ORTHO05D010691 3.8e-39 166.0 128 66.4
Ca_01975_v3 Cicer arietinum L. HOM05D008511 ORTHO05D010691 9.3e-38 161.4 246 40.7
Migut.D01193 Erythranthe guttata HOM05D008511 ORTHO05D010691 1.2e-37 161.0 228 41.2
HPP92_009504 Vanilla planifolia HOM05D008511 ORTHO05D010691 3.5e-29 132.9 232 38.4
Sabra01G0053200 Salix brachista HOM05D008511 ORTHO05D010691 1.1e-27 127.9 126 51.6
Sopen02g026560 Solanum pennellii HOM05D008511 ORTHO05D010691 2.8e-26 123.2 126 46.8
COL.COLO4_16225 Corchorus olitorius HOM05D008511 ORTHO05D010691 1.2e-24 117.9 128 47.7
Solyc02g081930.3 Solanum lycopersicum HOM05D008511 ORTHO05D010691 3.2e-22 109.8 156 41.0
ATR0763G254 Amborella trichopoda HOM05D008511 ORTHO05D010691 3.7e-18 96.3 174 34.5
Os01g0616800 Oryza sativa ssp. japonica HOM05D008511 ORTHO05D010691 2.9e-15 86.7 207 32.4
PGSC0003DMG402007333 Solanum tuberosum HOM05D008511 ORTHO05D010691 1.3e-12 77.8 79 53.2
Zm00001eb162150 Zea mays HOM05D008511 ORTHO05D010691 1.8e-12 77.4 217 29.0
SalBow3G2667 Salvia bowleyana HOM05D008511 ORTHO05D010691 1.5e-11 74.3 104 43.3


User provided reference genes

Program Settings