Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.0e-63 246.5 122 100.0
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.6e-54 215.3 122 89.3
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.4e-52 208.8 122 86.1
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.2e-46 189.9 109 89.0
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 1.5e-46 189.5 120 78.3
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 3.4e-46 188.3 122 77.0
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 5.8e-46 187.6 122 76.2
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 3.7e-45 184.9 122 74.6
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 4.9e-45 184.5 122 76.2
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.1e-44 183.3 120 75.8
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 1.4e-44 183.0 119 74.8
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.4e-44 182.2 119 74.8
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 3.5e-43 178.3 122 73.8
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 4.6e-43 177.9 102 90.2
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 1.3e-42 176.4 121 73.6
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 6.6e-42 174.1 116 74.1
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 9.5e-41 170.2 119 72.3
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.6e-40 169.5 120 71.7
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 2.1e-40 169.1 115 73.9
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 3.6e-40 168.3 120 72.5
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 4.7e-40 167.9 122 68.9
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.4e-39 166.4 122 69.7
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.8e-39 166.0 120 70.8
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 3.1e-39 165.2 105 73.3
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 3.1e-39 165.2 121 69.4
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 5.2e-39 164.5 122 68.0
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 6.8e-39 164.1 121 69.4
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 8.9e-39 163.7 121 70.2
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 8.9e-39 163.7 121 70.2
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 8.9e-39 163.7 121 69.4
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.2e-38 163.3 121 67.8
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.2e-38 163.3 99 76.8
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 1.5e-38 162.9 101 75.2
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 2.0e-38 162.5 121 67.8
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 3.4e-38 161.8 101 76.2
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 1.7e-37 159.5 108 71.3
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.2e-37 159.1 121 64.5
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 2.2e-37 159.1 90 81.1
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 2.2e-37 159.1 146 58.2
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 2.9e-37 158.7 121 66.1
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 2.9e-37 158.7 121 66.1
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 3.7e-37 158.3 121 65.3
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 3.7e-37 158.3 121 64.5
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 3.7e-37 158.3 121 64.5
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 3.7e-37 158.3 121 64.5
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 3.7e-37 158.3 121 65.3
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 3.7e-37 158.3 122 68.0
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 3.7e-37 158.3 121 66.9
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 4.9e-37 157.9 121 63.6
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 4.9e-37 157.9 121 63.6
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 4.9e-37 157.9 121 62.8
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 4.9e-37 157.9 121 66.9
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 6.4e-37 157.5 121 68.6
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 6.4e-37 157.5 120 67.5
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 6.4e-37 157.5 103 75.7
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 8.3e-37 157.1 121 65.3
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.4e-36 156.4 121 62.0
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 2.4e-36 155.6 87 79.3
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 2.4e-36 155.6 87 79.3
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 3.2e-36 155.2 105 67.6
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 3.2e-36 155.2 121 66.1
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 3.2e-36 155.2 121 66.1
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 4.1e-36 154.8 91 82.4
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 5.4e-36 154.5 93 77.4
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 5.4e-36 154.5 120 66.7
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 5.4e-36 154.5 107 68.2
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 5.4e-36 154.5 90 78.9
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 5.4e-36 154.5 90 78.9
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 7.1e-36 154.1 97 75.3
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 9.2e-36 153.7 109 67.0
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 6.0e-35 151.0 88 76.1
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 6.0e-35 151.0 90 77.8
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 6.0e-35 151.0 88 77.3
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 7.8e-35 150.6 119 63.9
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 7.8e-35 150.6 90 77.8
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.7e-34 149.4 120 62.5
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 2.3e-34 149.1 121 61.2
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 5.1e-34 147.9 90 77.8
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 1.1e-33 146.7 99 65.7
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.5e-33 146.4 120 63.3
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 4.3e-33 144.8 87 74.7
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 4.3e-33 144.8 111 62.2
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 1.6e-32 142.9 76 84.2
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 2.1e-32 142.5 108 61.1
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 2.8e-32 142.1 108 62.0
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 4.7e-32 141.4 118 59.3
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 5.2e-31 137.9 73 83.6
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.2e-30 136.7 100 69.0
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.0e-30 136.0 87 69.0
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 2.0e-30 136.0 117 57.3
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 3.4e-30 135.2 76 78.9
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 2.2e-29 132.5 76 77.6
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 2.2e-29 132.5 96 65.6
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 2.2e-29 132.5 110 58.2
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.1e-28 130.2 90 67.8
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 2.4e-28 129.0 86 72.1
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 4.2e-28 128.3 77 76.6
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 1.6e-27 126.3 109 58.7
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 2.1e-27 125.9 77 72.7
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.2e-22 110.2 97 50.5
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 4.4e-22 108.2 111 49.5
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 2.9e-21 105.5 130 44.6
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 5.4e-20 101.3 88 52.3
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 3.9e-18 95.1 77 57.1
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 7.3e-17 90.9 55 76.4
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 9.0e-15 84.0 110 40.0
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.1e-12 77.0 99 43.4


User provided reference genes

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