Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0014091 Rosa chinensis HOM05D000434 ORTHO05D007220 1.3e-60 236.1 116 100.0
FAN04G2744 Fragaria x ananassa HOM05D000434 ORTHO05D007220 6.9e-41 170.6 98 83.7
FAN08G1614 Fragaria x ananassa HOM05D000434 ORTHO05D007220 1.5e-40 169.5 98 82.7
FAN13G1139 Fragaria x ananassa HOM05D000434 ORTHO05D007220 1.5e-40 169.5 98 82.7
RcHm_v2.0_Chr7g0192351 Rosa chinensis HOM05D000434 ORTHO05D007220 2.6e-40 168.7 98 82.7
FvH4_5g06430 Fragaria vesca HOM05D000434 ORTHO05D007220 1.7e-39 166.0 98 81.6
FAN18G4510 Fragaria x ananassa HOM05D000434 ORTHO05D007220 1.7e-39 166.0 98 81.6
Prupe.5G164300 Prunus persica HOM05D000434 ORTHO05D007220 1.2e-37 159.8 98 78.6
QL10p006642 Quercus lobata HOM05D000434 ORTHO05D007220 2.1e-37 159.1 98 76.5
CANSAT80G0711 Cannabis sativa HOM05D000434 ORTHO05D007220 2.7e-37 158.7 98 77.6
Cpa.g.sc159.10 Carica papaya HOM05D000434 ORTHO05D007220 6.1e-37 157.5 98 74.5
Sabra15G0108200 Salix brachista HOM05D000434 ORTHO05D007220 7.9e-37 157.1 98 76.5
Phvul.003G202900 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 1.4e-36 156.4 98 75.5
CiPaw.11G018700 Carya illinoinensis HOM05D000434 ORTHO05D007220 1.8e-36 156.0 98 75.5
Sed0007484 Sechium edule HOM05D000434 ORTHO05D007220 2.3e-36 155.6 98 74.5
Ciclev10019026m.g Citrus clementina HOM05D000434 ORTHO05D007220 3.0e-36 155.2 98 75.5
Manes.14G059700 Manihot esculenta HOM05D000434 ORTHO05D007220 3.0e-36 155.2 101 70.3
MELO3C002307.2 Cucumis melo HOM05D000434 ORTHO05D007220 3.9e-36 154.8 98 74.5
CsaV3_1G008930 Cucumis sativus L. HOM05D000434 ORTHO05D007220 3.9e-36 154.8 98 74.5
Thecc.03G116400 Theobroma cacao HOM05D000434 ORTHO05D007220 3.9e-36 154.8 98 74.5
Potri.015G085300 Populus trichocarpa HOM05D000434 ORTHO05D007220 5.1e-36 154.5 98 76.5
GSVIVG01007621001 Vitis vinifera HOM05D000434 ORTHO05D007220 5.1e-36 154.5 98 75.5
Eucgr.K02783 Eucalyptus grandis HOM05D000434 ORTHO05D007220 8.8e-36 153.7 98 74.5
VMungo1215G0744 Vigna mungo HOM05D000434 ORTHO05D007220 8.8e-36 153.7 98 73.5
ClCG03G003080 Citrullus lanatus HOM05D000434 ORTHO05D007220 1.1e-35 153.3 98 73.5
Dinv20591 Davidia involucrata HOM05D000434 ORTHO05D007220 1.1e-35 153.3 98 74.5
Manes.06G111600 Manihot esculenta HOM05D000434 ORTHO05D007220 1.1e-35 153.3 98 72.4
Lj5A131T30 Lonicera japonica HOM05D000434 ORTHO05D007220 1.5e-35 152.9 98 74.5
Cfa019232 Carpinus fangiana HOM05D000434 ORTHO05D007220 2.0e-35 152.5 98 72.4
MD06G1164800 Malus domestica HOM05D000434 ORTHO05D007220 2.0e-35 152.5 98 75.5
Ca_19423_v3 Cicer arietinum L. HOM05D000434 ORTHO05D007220 2.6e-35 152.1 98 71.4
Glyma.05G042400 Glycine max HOM05D000434 ORTHO05D007220 2.6e-35 152.1 98 74.5
COL.COLO4_20642 Corchorus olitorius HOM05D000434 ORTHO05D007220 4.4e-35 151.4 98 72.4
Lalb_Chr07g0183031 Lupinus albus HOM05D000434 ORTHO05D007220 4.4e-35 151.4 98 71.4
MD14G1170100 Malus domestica HOM05D000434 ORTHO05D007220 4.4e-35 151.4 98 73.5
TWI23G1317 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 4.4e-35 151.4 98 71.4
Dinv38518 Davidia involucrata HOM05D000434 ORTHO05D007220 5.7e-35 151.0 98 74.5
Gohir.A07G056000 Gossypium hirsutum HOM05D000434 ORTHO05D007220 5.7e-35 151.0 98 72.4
TWI39G0950 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 5.7e-35 151.0 98 73.5
arahy.Tifrunner.gnm1.ann1.NJ3BP6 Arachis hypogaea HOM05D000434 ORTHO05D007220 7.4e-35 150.6 98 73.5
arahy.Tifrunner.gnm1.ann1.T2T4K7 Arachis hypogaea HOM05D000434 ORTHO05D007220 7.4e-35 150.6 98 73.5
Thhalv10012812m.g Eutrema salsugineum HOM05D000434 ORTHO05D007220 7.4e-35 150.6 98 73.5
Glyma.17G125100 Glycine max HOM05D000434 ORTHO05D007220 7.4e-35 150.6 98 73.5
THA.LOC104824992 Tarenaya hassleriana HOM05D000434 ORTHO05D007220 7.4e-35 150.6 98 72.4
vmacro16649 Vaccinium macrocarpon HOM05D000434 ORTHO05D007220 7.4e-35 150.6 98 73.5
CSS0021677 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D007220 9.7e-35 150.2 98 73.5
BraSC37t46157Z Brassica rapa HOM05D000434 ORTHO05D007220 1.3e-34 149.8 98 72.4
AL8G24240 Arabidopsis lyrata HOM05D000434 ORTHO05D007220 1.7e-34 149.4 98 72.4
CARHR258410 Cardamine hirsuta HOM05D000434 ORTHO05D007220 1.7e-34 149.4 98 72.4
Gohir.D07G060300 Gossypium hirsutum HOM05D000434 ORTHO05D007220 1.7e-34 149.4 98 71.4
Lj4g0018547 Lotus japonicus HOM05D000434 ORTHO05D007220 1.7e-34 149.4 98 70.4
Rhsim12G0168600 Rhododendron simsii HOM05D000434 ORTHO05D007220 1.7e-34 149.4 98 72.4
Duzib205G0335 Durio zibethinus HOM05D000434 ORTHO05D007220 2.2e-34 149.1 98 72.4
Gorai.001G064000 Gossypium raimondii HOM05D000434 ORTHO05D007220 2.2e-34 149.1 98 71.4
Aa31sc402G20 Aethionema arabicum HOM05D000434 ORTHO05D007220 2.8e-34 148.7 98 71.4
A10p08480 Brassica napus HOM05D000434 ORTHO05D007220 2.8e-34 148.7 98 71.4
Peaxi162Scf00089g01235 Petunia axillaris HOM05D000434 ORTHO05D007220 2.8e-34 148.7 98 70.4
Actinidia08038 Actinidia chinensis HOM05D000434 ORTHO05D007220 3.7e-34 148.3 98 71.4
CAN.G126.48 Capsicum annuum HOM05D000434 ORTHO05D007220 3.7e-34 148.3 98 70.4
Sp6g12320 Schrenkiella parvula HOM05D000434 ORTHO05D007220 3.7e-34 148.3 98 71.4
BcaC04g20813 Brassica carinata HOM05D000434 ORTHO05D007220 4.8e-34 147.9 98 71.4
C09p38860 Brassica napus HOM05D000434 ORTHO05D007220 4.8e-34 147.9 98 71.4
BolC9t56752H Brassica oleracea HOM05D000434 ORTHO05D007220 4.8e-34 147.9 98 71.4
AT5G50210 Arabidopsis thaliana HOM05D000434 ORTHO05D007220 6.3e-34 147.5 98 71.4
Carub.0008s1022 Capsella rubella HOM05D000434 ORTHO05D007220 6.3e-34 147.5 98 71.4
Cc04_g11340 Coffea canephora HOM05D000434 ORTHO05D007220 8.2e-34 147.1 98 69.4
HanXRQChr16g0504771 Helianthus annuus HOM05D000434 ORTHO05D007220 8.2e-34 147.1 98 71.4
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 8.2e-34 147.1 98 70.4
Atru.chr9.2596 Acer truncatum HOM05D000434 ORTHO05D007220 1.1e-33 146.7 98 73.5
BcaB08g35393 Brassica carinata HOM05D000434 ORTHO05D007220 1.1e-33 146.7 98 71.4
Medtr4g104680 Medicago truncatula HOM05D000434 ORTHO05D007220 1.1e-33 146.7 98 70.4
Sopen03g031160 Solanum pennellii HOM05D000434 ORTHO05D007220 1.4e-33 146.4 98 69.4
Nn3g16677 Nelumbo nucifera HOM05D000434 ORTHO05D007220 1.8e-33 146.0 98 71.4
Solyc03g112060.3 Solanum lycopersicum HOM05D000434 ORTHO05D007220 2.4e-33 145.6 98 69.4
PGSC0003DMG400018194 Solanum tuberosum HOM05D000434 ORTHO05D007220 2.4e-33 145.6 98 69.4
Psat4g061760 Pisum sativum HOM05D000434 ORTHO05D007220 5.3e-33 144.4 98 70.4
CDE09G1335 Ceratophyllum demersum HOM05D000434 ORTHO05D007220 7.0e-33 144.1 98 71.4
Psat5g209640 Pisum sativum HOM05D000434 ORTHO05D007220 7.0e-33 144.1 98 69.4
ECA232G0018 Erigeron canadensis HOM05D000434 ORTHO05D007220 1.2e-32 143.3 98 67.3
PGR044G1593 Punica granatum HOM05D000434 ORTHO05D007220 1.2e-32 143.3 98 71.4
ATR0122G015 Amborella trichopoda HOM05D000434 ORTHO05D007220 1.5e-32 142.9 95 71.6
EL10Ac7g17990 Beta vulgaris HOM05D000434 ORTHO05D007220 2.6e-32 142.1 98 70.4
Sc04g0001370 Simmondsia chinensis HOM05D000434 ORTHO05D007220 2.6e-32 142.1 98 70.4
TAR629G3010 Trochodendron aralioides HOM05D000434 ORTHO05D007220 2.6e-32 142.1 98 70.4
Lsat_1_v5_gn_4_79240 Lactuca sativa HOM05D000434 ORTHO05D007220 3.5e-32 141.7 98 66.3
AUR62001201 Chenopodium quinoa HOM05D000434 ORTHO05D007220 1.0e-31 140.2 98 69.4
Nitab4.5_0002522g0070 Nicotiana tabacum HOM05D000434 ORTHO05D007220 1.0e-31 140.2 98 67.3
TAR371G0697 Trochodendron aralioides HOM05D000434 ORTHO05D007220 1.0e-31 140.2 98 70.4
SalBow5G3182 Salvia bowleyana HOM05D000434 ORTHO05D007220 2.2e-31 139.0 98 66.3
AUR62022128 Chenopodium quinoa HOM05D000434 ORTHO05D007220 2.9e-31 138.7 98 68.4
Migut.O00172 Erythranthe guttata HOM05D000434 ORTHO05D007220 2.9e-31 138.7 98 65.3
Psat5g059720 Pisum sativum HOM05D000434 ORTHO05D007220 2.9e-31 138.7 97 69.1
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 6.5e-31 137.5 98 67.3
SalBow5G4295 Salvia bowleyana HOM05D000434 ORTHO05D007220 6.5e-31 137.5 98 65.3
Os12g0290150 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D007220 8.5e-31 137.1 98 65.3
unitig_8.g3068 Utricularia gibba HOM05D000434 ORTHO05D007220 8.5e-31 137.1 98 64.3
Nitab4.5_0008037g0020 Nicotiana tabacum HOM05D000434 ORTHO05D007220 1.1e-30 136.7 98 66.3
Hund05601 Selenicereus undatus HOM05D000434 ORTHO05D007220 1.1e-30 136.7 98 68.4
PSO063G6548 Papaver somniferum HOM05D000434 ORTHO05D007220 1.9e-30 136.0 98 67.3
PSO754G0033 Papaver somniferum HOM05D000434 ORTHO05D007220 1.9e-30 136.0 98 67.3
Aqoxy5G03714 Aquilegia oxysepala HOM05D000434 ORTHO05D007220 2.5e-30 135.6 98 68.4
Haze_07599 Corylus avellana HOM05D000434 ORTHO05D007220 4.2e-30 134.8 144 50.7
HPP92_006247 Vanilla planifolia HOM05D000434 ORTHO05D007220 1.2e-29 133.3 98 64.3
AagrBONN_evm.TU.Sc2ySwM_368.2356 Anthoceros agrestis HOM05D000434 ORTHO05D007220 2.1e-29 132.5 98 63.3
SMO367G0357 Selaginella moellendorffii HOM05D000434 ORTHO05D007220 1.8e-28 129.4 98 58.2
Mapoly0102s0006 Marchantia polymorpha HOM05D000434 ORTHO05D007220 8.8e-28 127.1 98 61.2
Pp3c22_13970 Physcomitrium patens HOM05D000434 ORTHO05D007220 1.1e-27 126.7 98 57.1
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 2.6e-27 125.6 129 53.5
Pp3c19_15510 Physcomitrium patens HOM05D000434 ORTHO05D007220 7.4e-27 124.0 98 57.1
SEGI_39802 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 9.7e-27 123.6 98 61.2
CBR_g20372 Chara braunii HOM05D000434 ORTHO05D007220 2.4e-25 119.0 98 57.1
Oeu036497.1 Olea europaea HOM05D000434 ORTHO05D007220 3.1e-25 118.6 87 64.4
Cre06.g251450 Chlamydomonas reinhardtii HOM05D000434 ORTHO05D007220 4.1e-25 118.2 97 57.7
CBR_g50939 Chara braunii HOM05D000434 ORTHO05D007220 7.7e-24 114.0 98 56.1
MCO05G483 Micromonas commoda HOM05D000434 ORTHO05D007220 1.7e-23 112.8 98 50.0
PRCOL_00006555 Prasinoderma coloniale HOM05D000434 ORTHO05D007220 1.7e-23 112.8 95 52.6
Psat5g059840 Pisum sativum HOM05D000434 ORTHO05D007220 4.0e-20 101.7 70 70.0
Psat0s171g0040 Pisum sativum HOM05D000434 ORTHO05D007220 6.8e-20 100.9 98 55.1
Psat0s2371g0040 Pisum sativum HOM05D000434 ORTHO05D006824 6.8e-20 100.9 98 55.1
SEGI_19957 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 4.5e-16 88.2 64 64.1


User provided reference genes

Program Settings