Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0013641 Rosa chinensis HOM05D017196 ORTHO05D022580 2.8e-102 375.2 172 100.0
RcHm_v2.0_Chr5g0013591 Rosa chinensis HOM05D017196 ORTHO05D026743 4.7e-62 241.5 250 52.0
FAN15G2713 Fragaria x ananassa HOM05D017196 ORTHO05D022580 6.9e-37 157.9 182 47.8
FAN15G3089 Fragaria x ananassa HOM05D017196 ORTHO05D022580 8.2e-30 134.4 166 43.4
FvH4_2g01202 Fragaria vesca HOM05D017196 ORTHO05D022580 1.0e-27 127.5 166 42.2
FvH4_2g01201 Fragaria vesca HOM05D017196 ORTHO05D022580 1.3e-22 110.5 160 39.4
Prupe.4G159500 Prunus persica HOM05D011414 ORTHO05D012868 7.7e-12 74.7 116 35.3
FvH4_3g13110 Fragaria vesca HOM05D011414 ORTHO05D012868 1.1e-10 70.9 86 47.7
RcHm_v2.0_Chr2g0131001 Rosa chinensis HOM05D017196 ORTHO05D345325 1.4e-10 70.5 76 40.8
Prupe.1G187100 Prunus persica HOM05D011414 ORTHO05D012868 2.7e-09 66.2 112 31.2
RcHm_v2.0_Chr5g0038691 Rosa chinensis HOM05D014182 ORTHO05D017018 3.0e-08 62.8 86 34.9
RcHm_v2.0_Chr1g0362141 Rosa chinensis HOM05D009281 ORTHO05D029533 5.2e-08 62.0 104 33.7
RcHm_v2.0_Chr1g0378661 Rosa chinensis HOM05D009281 ORTHO05D029533 6.7e-08 61.6 104 32.7
Aqoxy7G02525 Aquilegia oxysepala HOM05D033407 ORTHO05D026743 1.1e-07 60.8 81 37.0
Prupe.4G077400 Prunus persica HOM05D011414 ORTHO05D012868 1.5e-07 60.5 98 32.7
RcHm_v2.0_Chr5g0014841 Rosa chinensis HOM05D011414 ORTHO05D012868 5.7e-07 58.5 86 31.4
RcHm_v2.0_Chr5g0021371 Rosa chinensis HOM05D011414 ORTHO05D012868 9.7e-07 57.8 82 42.7
Aqoxy7G01298 Aquilegia oxysepala HOM05D033407 ORTHO05D026743 1.3e-06 57.4 78 35.9
Prupe.4G159300 Prunus persica HOM05D011414 ORTHO05D012868 1.3e-06 57.4 65 36.9
RcHm_v2.0_Chr5g0058561 Rosa chinensis HOM05D008624 ORTHO05D011001 2.2e-06 56.6 85 37.6
RcHm_v2.0_Chr5g0058501 Rosa chinensis HOM05D008624 ORTHO05D011001 4.8e-06 55.5 85 35.3


User provided reference genes

Program Settings