Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0010841 Rosa chinensis HOM05D000815 ORTHO05D000636 1.0e-21 107.1 74 100.0
FvH4_3g07760 Fragaria vesca HOM05D000815 ORTHO05D000636 1.1e-20 103.6 74 86.5
MD05G1300700 Malus domestica HOM05D000815 ORTHO05D000636 2.8e-19 99.0 74 73.0
FAN21G2446 Fragaria x ananassa HOM05D000815 ORTHO05D000636 1.4e-18 96.7 70 92.9
FAN11G2525 Fragaria x ananassa HOM05D000815 ORTHO05D000636 4.1e-18 95.1 70 84.3
FAN25G1173 Fragaria x ananassa HOM05D000815 ORTHO05D000636 7.0e-18 94.4 69 92.8
FAN16G0309 Fragaria x ananassa HOM05D000815 ORTHO05D000636 9.1e-18 94.0 69 91.3
Prupe.4G061800 Prunus persica HOM05D000815 ORTHO05D000636 4.5e-17 91.7 69 94.2
CiPaw.09G070000 Carya illinoinensis HOM05D000815 ORTHO05D000636 5.9e-17 91.3 74 86.5
Thecc.06G170300 Theobroma cacao HOM05D000815 ORTHO05D000636 2.9e-16 89.0 75 89.3
CANSAT35G0800 Cannabis sativa HOM05D000815 ORTHO05D000636 5.0e-16 88.2 73 65.8
PGR031G0746 Punica granatum HOM05D000815 ORTHO05D000636 6.5e-16 87.8 72 86.1
Ciclev10016016m.g Citrus clementina HOM05D000815 ORTHO05D000636 1.5e-15 86.7 73 79.5
Haze_06228 Corylus avellana HOM05D000815 ORTHO05D000636 1.9e-15 86.3 70 88.6
Dinv40679 Davidia involucrata HOM05D000815 ORTHO05D000636 3.2e-15 85.5 73 80.8
Lalb_Chr20g0117461 Lupinus albus HOM05D000815 ORTHO05D000636 4.2e-15 85.1 74 78.4
CiPaw.10G059200 Carya illinoinensis HOM05D000815 ORTHO05D000636 7.2e-15 84.3 73 83.6
Sopen02g021710 Solanum pennellii HOM05D000815 ORTHO05D000636 7.2e-15 84.3 74 78.4
Gohir.A10G037000 Gossypium hirsutum HOM05D000815 ORTHO05D000636 1.2e-14 83.6 73 84.9
Gohir.D10G037600 Gossypium hirsutum HOM05D000815 ORTHO05D000636 1.2e-14 83.6 73 84.9
Gorai.011G039600 Gossypium raimondii HOM05D000815 ORTHO05D000636 1.2e-14 83.6 73 84.9
Cfa000610 Carpinus fangiana HOM05D000815 ORTHO05D000636 1.6e-14 83.2 69 87.0
Actinidia16795 Actinidia chinensis HOM05D000815 ORTHO05D000636 2.7e-14 82.4 74 77.0
Cc02_g15010 Coffea canephora HOM05D000815 ORTHO05D000636 2.7e-14 82.4 74 78.4
Solyc02g076810.4 Solanum lycopersicum HOM05D000815 ORTHO05D000636 4.7e-14 81.6 74 77.0
PGR042G0710 Punica granatum HOM05D000815 ORTHO05D000636 6.1e-14 81.3 74 82.4
TWI38G1375 Tripterygium wilfordii HOM05D000815 ORTHO05D000636 6.1e-14 81.3 73 80.8
MSTRG.13222 Avicennia marina HOM05D000815 ORTHO05D000636 1.0e-13 80.5 75 80.0
Hma1.2p1_0215F.1_g090850 Hydrangea macrophylla HOM05D000815 ORTHO05D000636 1.4e-13 80.1 69 79.7
Hma1.2p1_2509F.1_g323575 Hydrangea macrophylla HOM05D000815 ORTHO05D000636 1.4e-13 80.1 69 79.7
Manes.16G040100 Manihot esculenta HOM05D000815 ORTHO05D000636 1.4e-13 80.1 69 72.5
MELO3C002654.2 Cucumis melo HOM05D000815 ORTHO05D000636 1.8e-13 79.7 73 58.9
Migut.H01434 Erythranthe guttata HOM05D000815 ORTHO05D000636 1.8e-13 79.7 74 78.4
TWI60G0759 Tripterygium wilfordii HOM05D000815 ORTHO05D000636 1.8e-13 79.7 74 73.0
CAN.G370.79 Capsicum annuum HOM05D000815 ORTHO05D000636 3.0e-13 79.0 71 78.9
Sed0023637 Sechium edule HOM05D000815 ORTHO05D000636 3.0e-13 79.0 71 66.2
Atru.chr10.1663 Acer truncatum HOM05D000815 ORTHO05D000636 4.0e-13 78.6 70 80.0
ClCG01G023750 Citrullus lanatus HOM05D001767 ORTHO05D000636 4.0e-13 78.6 67 80.6
TWI63G0072 Tripterygium wilfordii HOM05D000815 ORTHO05D000636 4.0e-13 78.6 68 77.9
Cpa.g.sc7.72 Carica papaya HOM05D000815 ORTHO05D000636 5.2e-13 78.2 67 88.1
Prupe.1G018500 Prunus persica HOM05D004187 ORTHO05D004890 5.2e-13 78.2 69 65.2
ClCG03G007670 Citrullus lanatus HOM05D000815 ORTHO05D000636 6.8e-13 77.8 65 64.6
CsaV3_UNG085670 Cucumis sativus L. HOM05D000815 ORTHO05D000636 6.8e-13 77.8 65 64.6
Sed0022312 Sechium edule HOM05D000815 ORTHO05D000636 6.8e-13 77.8 71 69.0
Oeu041768.1 Olea europaea HOM05D000815 ORTHO05D000636 8.8e-13 77.4 75 77.3
Psat1g197960 Pisum sativum HOM05D000815 ORTHO05D000636 8.8e-13 77.4 73 76.7
SalBow8G0414 Salvia bowleyana HOM05D000815 ORTHO05D000636 8.8e-13 77.4 75 73.3
vmacro16066 Vaccinium macrocarpon HOM05D000815 ORTHO05D000636 8.8e-13 77.4 69 79.7
Manes.17G056000 Manihot esculenta HOM05D000815 ORTHO05D000636 1.2e-12 77.0 68 70.6
PGSC0003DMG400010197 Solanum tuberosum HOM05D000815 ORTHO05D000636 1.5e-12 76.6 71 77.5
Duzib235G0969 Durio zibethinus HOM05D000815 ORTHO05D000636 2.0e-12 76.3 67 85.1
Nitab4.5_0000605g0160 Nicotiana tabacum HOM05D000815 ORTHO05D000636 2.0e-12 76.3 71 77.5
SalBow4G1589 Salvia bowleyana HOM05D000815 ORTHO05D000636 2.0e-12 76.3 70 74.3
Actinidia07641 Actinidia chinensis HOM05D000815 ORTHO05D000636 2.6e-12 75.9 69 58.0
CSS0040066 Camellia sinensis var. sinensis HOM05D000815 ORTHO05D000636 2.6e-12 75.9 69 76.8
Glyma.15G082900 Glycine max HOM05D000815 ORTHO05D000636 2.6e-12 75.9 74 75.7
Phvul.006G176000 Phaseolus vulgaris HOM05D000815 ORTHO05D000636 2.6e-12 75.9 73 76.7
Sc05g0007080 Simmondsia chinensis HOM05D000815 ORTHO05D000636 2.6e-12 75.9 70 77.1
MSTRG.14734 Avicennia marina HOM05D000815 ORTHO05D000636 3.4e-12 75.5 70 75.7
Nitab4.5_0001923g0040 Nicotiana tabacum HOM05D000815 ORTHO05D000636 3.4e-12 75.5 69 78.3
GSVIVG01021218001 Vitis vinifera HOM05D001767 ORTHO05D001714 3.4e-12 75.5 70 55.7
Duzib192G0497 Durio zibethinus HOM05D000815 ORTHO05D000636 4.4e-12 75.1 63 88.9
Lsat_1_v5_gn_5_157100 Lactuca sativa HOM05D000815 ORTHO05D000636 7.5e-12 74.3 75 74.7
SalBow5G5331 Salvia bowleyana HOM05D000815 ORTHO05D000248 7.5e-12 74.3 70 65.7
Sed0020128 Sechium edule HOM05D000815 ORTHO05D000636 9.8e-12 73.9 71 57.7
AUR62031211 Chenopodium quinoa HOM05D000815 ORTHO05D000636 1.7e-11 73.2 72 72.2
Hund21173 Selenicereus undatus HOM05D000815 ORTHO05D000636 2.8e-11 72.4 69 73.9
EL10Ac8g20595 Beta vulgaris HOM05D000815 ORTHO05D000636 3.7e-11 72.0 70 72.9
HanXRQChr01g0008201 Helianthus annuus HOM05D000815 ORTHO05D000636 3.7e-11 72.0 75 72.0
ECA248G0401 Erigeron canadensis HOM05D000815 ORTHO05D000636 4.8e-11 71.6 70 74.3
Migut.M01037 Erythranthe guttata HOM05D000815 ORTHO05D000636 4.8e-11 71.6 74 73.0
Lj1P1192T26 Lonicera japonica HOM05D000815 ORTHO05D000636 4.8e-11 71.6 67 76.1
Lj2A301T55 Lonicera japonica HOM05D000815 ORTHO05D000636 8.3e-11 70.9 69 78.3
Lalb_Chr15g0086101 Lupinus albus HOM05D000815 ORTHO05D000636 8.3e-11 70.9 72 73.6
SGA_v2.0_scaffold12G06108 Striga asiatica HOM05D000815 ORTHO05D000636 1.8e-10 69.7 69 75.4
VMungo0540G0075 Vigna mungo HOM05D000815 ORTHO05D000636 1.8e-10 69.7 69 76.8
Psat7g165120 Pisum sativum HOM05D000815 ORTHO05D000636 2.4e-10 69.3 75 64.0
Glyma.13G229600 Glycine max HOM05D000815 ORTHO05D000636 3.1e-10 68.9 69 76.8
Rhsim02G0143100 Rhododendron simsii HOM05D000815 ORTHO05D000636 3.1e-10 68.9 63 81.0
Ca_00437_v3 Cicer arietinum L. HOM05D000815 ORTHO05D000636 4.1e-10 68.6 69 75.4
SGA_v2.0_scaffold1G00048 Striga asiatica HOM05D000815 ORTHO05D000636 4.1e-10 68.6 75 70.7
QL05p047279 Quercus lobata HOM05D000815 ORTHO05D000636 5.4e-10 68.2 69 78.3
SGA_v2.0_scaffold16G07683 Striga asiatica HOM05D000815 ORTHO05D000636 5.4e-10 68.2 71 71.8
arahy.Tifrunner.gnm1.ann1.AVX1YG Arachis hypogaea HOM05D000815 ORTHO05D000636 7.0e-10 67.8 69 75.4
arahy.Tifrunner.gnm1.ann1.S1Y3JB Arachis hypogaea HOM05D000815 ORTHO05D000636 7.0e-10 67.8 69 75.4
Aqoxy1G02059 Aquilegia oxysepala HOM05D000815 ORTHO05D000636 9.1e-10 67.4 74 47.3
Lj6g0016738 Lotus japonicus HOM05D000815 ORTHO05D000636 9.1e-10 67.4 73 68.5
SHI19433 Sapria himalayana HOM05D000815 ORTHO05D000636 9.1e-10 67.4 71 53.5
CSS0043386 Camellia sinensis var. sinensis HOM05D000815 ORTHO05D000636 1.6e-09 66.6 40 80.0
Nn1g09121 Nelumbo nucifera HOM05D000815 ORTHO05D000636 1.6e-09 66.6 70 52.9
Lalb_Chr01g0006021 Lupinus albus HOM05D000815 ORTHO05D000636 2.7e-09 65.9 74 52.7
arahy.Tifrunner.gnm1.ann1.56MBJ9 Arachis hypogaea HOM05D000815 ORTHO05D000636 3.5e-09 65.5 73 50.7
arahy.Tifrunner.gnm1.ann1.XCJ6I1 Arachis hypogaea HOM05D000815 ORTHO05D000636 3.5e-09 65.5 73 50.7
Ca_18875_v3 Cicer arietinum L. HOM05D000815 ORTHO05D000636 3.5e-09 65.5 74 52.7
Glyma.12G210900 Glycine max HOM05D000815 ORTHO05D000636 5.9e-09 64.7 73 47.9
MBI06_g08591_MAGBIO Magnolia biondii HOM05D000815 ORTHO05D000636 5.9e-09 64.7 69 49.3
CsaV3_1G033310 Cucumis sativus L. HOM05D000815 ORTHO05D000636 7.7e-09 64.3 69 56.5
Glyma.13G290500 Glycine max HOM05D000815 ORTHO05D000636 7.7e-09 64.3 73 46.6
CAN.G1049.4 Capsicum annuum HOM05D000815 ORTHO05D000636 1.3e-08 63.5 71 49.3
Dinv15430 Davidia involucrata HOM05D000815 ORTHO05D000636 1.3e-08 63.5 74 68.9
TAR629G0571 Trochodendron aralioides HOM05D000815 ORTHO05D000636 1.3e-08 63.5 69 63.8
ATR0602G048 Amborella trichopoda HOM05D000815 ORTHO05D000636 1.7e-08 63.2 69 46.4
Solyc12g010890.2 Solanum lycopersicum HOM05D000815 ORTHO05D000636 1.7e-08 63.2 72 50.0
Sopen12g006250 Solanum pennellii HOM05D000815 ORTHO05D000636 1.7e-08 63.2 72 50.0
Medtr4g079960 Medicago truncatula HOM05D000815 ORTHO05D000636 2.2e-08 62.8 64 65.6
Sabra01G0086900 Salix brachista HOM05D000815 ORTHO05D000636 2.9e-08 62.4 70 60.0
MSTRG.16152 Avicennia marina HOM05D000815 ORTHO05D000636 3.8e-08 62.0 63 76.2
Cfa023594 Carpinus fangiana HOM05D000815 ORTHO05D000636 3.8e-08 62.0 67 47.8
AUR62027681 Chenopodium quinoa HOM05D000815 ORTHO05D000636 3.8e-08 62.0 60 80.0
QL08p041784 Quercus lobata HOM05D000815 ORTHO05D000636 3.8e-08 62.0 71 45.1
Lalb_Chr18g0054541 Lupinus albus HOM05D000815 ORTHO05D000636 5.0e-08 61.6 69 69.6
Sabra03G0082600 Salix brachista HOM05D000015 ORTHO05D000636 5.0e-08 61.6 63 66.7
Actinidia10956 Actinidia chinensis HOM05D000815 ORTHO05D000636 6.5e-08 61.2 68 69.1
TAR626G0720 Trochodendron aralioides HOM05D000815 ORTHO05D000636 6.5e-08 61.2 69 53.6
Lj3g0000231 Lotus japonicus HOM05D000815 ORTHO05D000636 1.1e-07 60.5 67 61.2
TAR624G0889 Trochodendron aralioides HOM05D000815 ORTHO05D000636 1.1e-07 60.5 70 44.3
Haze_13375 Corylus avellana HOM05D000815 ORTHO05D000636 1.5e-07 60.1 70 44.3
Lj3g0003562 Lotus japonicus HOM05D000815 ORTHO05D000636 1.5e-07 60.1 73 57.5
MSTRG.15090 Avicennia marina HOM05D000815 ORTHO05D000636 1.9e-07 59.7 65 49.2
Potri.003G118600 Populus trichocarpa HOM05D000815 ORTHO05D000636 1.9e-07 59.7 65 64.6
HPP92_024042 Vanilla planifolia HOM05D000815 ORTHO05D000636 1.9e-07 59.7 71 42.3
CiPaw.03G195300 Carya illinoinensis HOM05D000815 ORTHO05D000636 2.5e-07 59.3 64 48.4
CDE10G0436 Ceratophyllum demersum HOM05D000815 ORTHO05D000636 3.2e-07 58.9 65 46.2
Cc05_g08380 Coffea canephora HOM05D000815 ORTHO05D000636 3.2e-07 58.9 65 55.4
Hma1.2p1_0178F.1_g078790 Hydrangea macrophylla HOM05D000815 ORTHO05D000636 3.2e-07 58.9 65 70.8
Lalb_Chr19g0134871 Lupinus albus HOM05D000815 ORTHO05D000636 3.2e-07 58.9 39 74.4
PGSC0003DMG400007806 Solanum tuberosum HOM05D000815 ORTHO05D000636 3.2e-07 58.9 64 51.6
MSTRG.7410 Avicennia marina HOM05D000815 ORTHO05D000636 4.2e-07 58.5 62 64.5
Actinidia11156 Actinidia chinensis HOM05D000815 ORTHO05D000636 5.5e-07 58.2 72 65.3
Migut.M00262 Erythranthe guttata HOM05D000815 ORTHO05D000636 5.5e-07 58.2 72 43.1
Potri.001G113600 Populus trichocarpa HOM05D000815 ORTHO05D000636 5.5e-07 58.2 63 63.5
Aqoxy4G00340 Aquilegia oxysepala HOM05D000815 ORTHO05D000636 7.2e-07 57.8 65 46.2
Nitab4.5_0001095g0020 Nicotiana tabacum HOM05D000815 ORTHO05D000636 7.2e-07 57.8 39 74.4
ATR0681G182 Amborella trichopoda HOM05D000815 ORTHO05D000636 9.4e-07 57.4 68 42.6
AagrBONN_evm.TU.Sc2ySwM_117.2010 Anthoceros agrestis HOM05D000815 ORTHO05D000636 9.4e-07 57.4 67 44.8
EL10Ac9g20942 Beta vulgaris HOM05D000815 ORTHO05D000636 9.4e-07 57.4 64 50.0
CDE10G0137 Ceratophyllum demersum HOM05D000815 ORTHO05D000636 9.4e-07 57.4 65 46.2
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 9.4e-07 57.4 70 38.6
Nitab4.5_0009892g0030 Nicotiana tabacum HOM05D000815 ORTHO05D000636 9.4e-07 57.4 40 70.0
Phvul.005G095000 Phaseolus vulgaris HOM05D000815 ORTHO05D000636 9.4e-07 57.4 39 71.8
Solyc07g055100.4 Solanum lycopersicum HOM05D000815 ORTHO05D000636 9.4e-07 57.4 64 48.4
TAR624G0616 Trochodendron aralioides HOM05D000815 ORTHO05D000636 9.4e-07 57.4 67 65.7
VMungo1080G0495 Vigna mungo HOM05D000815 ORTHO05D000636 9.4e-07 57.4 39 71.8
A09p51170 Brassica napus HOM05D000815 ORTHO05D000636 1.2e-06 57.0 69 43.5
BolC8t50995H Brassica oleracea HOM05D000815 ORTHO05D000636 1.2e-06 57.0 69 43.5
BraA09t40561Z Brassica rapa HOM05D000815 ORTHO05D000636 1.2e-06 57.0 69 43.5
Oeu058993.2 Olea europaea HOM05D000815 ORTHO05D000636 1.2e-06 57.0 69 65.2
Dinv10600 Davidia involucrata HOM05D000815 ORTHO05D000636 1.6e-06 56.6 59 49.2
Prupe.3G118000 Prunus persica HOM05D000815 ORTHO05D000636 1.6e-06 56.6 69 50.7
vmacro12377 Vaccinium macrocarpon HOM05D000815 ORTHO05D000636 1.6e-06 56.6 65 50.8
arahy.Tifrunner.gnm1.ann1.EPKF0N Arachis hypogaea HOM05D000815 ORTHO05D000636 2.1e-06 56.2 39 71.8
arahy.Tifrunner.gnm1.ann1.LPK4E6 Arachis hypogaea HOM05D000815 ORTHO05D000636 2.1e-06 56.2 39 71.8
Eucgr.A01918 Eucalyptus grandis HOM05D000815 ORTHO05D000636 2.1e-06 56.2 71 43.7
Hund07793 Selenicereus undatus HOM05D000815 ORTHO05D000636 2.1e-06 56.2 63 50.8
DCAR_007945 Daucus carota HOM05D000815 ORTHO05D000636 2.7e-06 55.8 68 60.3
Oeu053230.1 Olea europaea HOM05D000815 ORTHO05D000636 2.7e-06 55.8 40 67.5
SEGI_31413 Sequoiadendron giganteum HOM05D000815 ORTHO05D000636 2.7e-06 55.8 66 56.1
CAN.G862.30 Capsicum annuum HOM05D000815 ORTHO05D000636 3.6e-06 55.5 68 58.8
Medtr2g016140 Medicago truncatula HOM05D000815 ORTHO05D000636 3.6e-06 55.5 67 70.1
BcaC08g44930 Brassica carinata HOM05D000815 ORTHO05D000636 4.7e-06 55.1 69 50.7
C06p25580 Brassica napus HOM05D000815 ORTHO05D000636 4.7e-06 55.1 69 50.7
BolC6t37719H Brassica oleracea HOM05D000815 ORTHO05D000636 4.7e-06 55.1 69 50.7
TWI14G1306 Tripterygium wilfordii HOM05D000815 ORTHO05D000636 4.7e-06 55.1 65 44.6
Duzib192G0287 Durio zibethinus HOM05D000815 ORTHO05D000636 6.1e-06 54.7 65 55.4
Lsat_1_v5_gn_9_61041 Lactuca sativa HOM05D000815 ORTHO05D000636 6.1e-06 54.7 65 44.6
Atru.chr1.4106 Acer truncatum HOM05D000815 ORTHO05D000636 8.0e-06 54.3 69 49.3
CAN.G1081.15 Capsicum annuum HOM05D000815 ORTHO05D000636 8.0e-06 54.3 65 58.5
DCAR_011831 Daucus carota HOM05D000815 ORTHO05D000636 8.0e-06 54.3 66 51.5
Lj8A101T44 Lonicera japonica HOM05D000815 ORTHO05D000636 8.0e-06 54.3 61 47.5
Nitab4.5_0001369g0050 Nicotiana tabacum HOM05D000815 ORTHO05D000636 8.0e-06 54.3 62 48.4
QL08p063514 Quercus lobata HOM05D000815 ORTHO05D000636 8.0e-06 54.3 68 44.1
SEGI_03096 Sequoiadendron giganteum HOM05D000815 ORTHO05D000636 8.0e-06 54.3 69 40.6
PGSC0003DMG400030023 Solanum tuberosum HOM05D000815 ORTHO05D000636 8.0e-06 54.3 73 43.8


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