Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 2.4e-102 375.6 195 100.0
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 5.3e-94 347.8 195 92.3
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 5.9e-93 344.4 195 91.3
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.2e-91 338.2 195 89.2
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 3.2e-83 312.0 195 81.5
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 4.1e-78 295.0 160 93.8
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 5.0e-76 288.1 198 80.8
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 8.0e-66 254.2 196 69.4
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 1.7e-63 246.5 200 67.5
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.7e-63 245.4 145 89.0
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.1e-62 243.8 190 69.5
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 1.4e-62 243.4 175 71.4
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 3.2e-62 242.3 195 68.2
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 5.4e-62 241.5 137 85.4
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 9.2e-62 240.7 196 65.3
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.2e-61 240.4 207 66.7
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.2e-61 240.4 136 86.8
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 3.5e-61 238.8 193 66.3
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 5.9e-61 238.0 201 67.2
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.7e-60 236.5 199 65.3
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 2.3e-60 236.1 190 66.8
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 2.3e-60 236.1 202 63.4
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.3e-60 236.1 192 66.1
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 3.9e-60 235.3 167 74.3
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 6.6e-60 234.6 198 65.2
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 6.6e-60 234.6 200 63.5
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 8.6e-60 234.2 200 66.5
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 8.6e-60 234.2 184 71.7
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.1e-59 233.8 197 65.5
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 1.1e-59 233.8 208 64.4
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 1.5e-59 233.4 196 65.3
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 1.9e-59 233.0 162 75.3
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 2.5e-59 232.6 147 80.3
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.5e-59 232.6 199 66.3
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 2.5e-59 232.6 193 66.3
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 4.3e-59 231.9 204 65.7
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 5.6e-59 231.5 200 63.0
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 9.5e-59 230.7 197 66.0
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.2e-58 230.3 199 65.8
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 2.1e-58 229.6 152 76.3
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 2.1e-58 229.6 197 66.5
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 2.1e-58 229.6 147 79.6
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 2.8e-58 229.2 201 65.2
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 2.8e-58 229.2 199 65.3
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 1.1e-57 227.3 210 61.9
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 2.3e-57 226.1 171 70.2
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 3.1e-57 225.7 143 79.0
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 3.1e-57 225.7 212 62.3
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 5.2e-57 224.9 135 83.0
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 8.9e-57 224.2 122 88.5
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.2e-56 223.8 154 72.7
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 1.5e-56 223.4 137 82.5
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 2.6e-56 222.6 139 78.4
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 3.4e-56 222.2 122 88.5
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 4.4e-56 221.9 122 88.5
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 7.5e-56 221.1 134 82.8
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 9.8e-56 220.7 122 86.9
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 9.8e-56 220.7 193 63.7
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 9.8e-56 220.7 155 73.5
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 1.3e-55 220.3 138 79.0
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.3e-55 220.3 143 77.6
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 1.7e-55 219.9 138 79.0
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 3.7e-55 218.8 122 86.9
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 4.9e-55 218.4 122 85.2
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 1.1e-54 217.2 152 72.4
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.1e-54 217.2 140 77.9
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 1.1e-54 217.2 180 63.9
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.1e-54 217.2 143 74.8
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 1.4e-54 216.9 154 74.0
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 2.4e-54 216.1 122 86.1
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 3.2e-54 215.7 138 76.8
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 3.2e-54 215.7 191 62.8
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 3.2e-54 215.7 150 72.7
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 3.2e-54 215.7 150 72.7
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 3.2e-54 215.7 169 68.0
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 3.2e-54 215.7 122 86.1
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 4.1e-54 215.3 136 78.7
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 5.4e-54 214.9 195 61.5
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 5.4e-54 214.9 189 65.6
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 9.2e-54 214.2 166 68.1
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.2e-53 213.8 134 78.4
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 2.7e-53 212.6 138 75.4
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 2.7e-53 212.6 155 69.7
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.0e-52 210.7 143 74.8
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.0e-52 210.7 190 61.6
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 1.7e-52 209.9 147 72.8
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 3.0e-52 209.1 179 64.8
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 3.9e-52 208.8 145 71.7
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 6.6e-52 208.0 192 59.9
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 6.6e-52 208.0 136 74.3
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.1e-51 207.2 136 71.3
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 2.5e-51 206.1 228 54.4
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 2.1e-50 203.0 138 77.5
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 4.7e-50 201.8 194 58.2
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.4e-49 200.3 192 55.7
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 8.9e-49 197.6 126 74.6
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.2e-48 197.2 169 63.3
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 7.1e-46 188.0 130 66.9
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.2e-45 187.2 195 56.4
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 7.8e-45 184.5 122 71.3
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.0e-44 182.6 99 89.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.5e-43 180.3 124 66.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.6e-42 176.8 127 65.4
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 3.6e-42 175.6 127 64.6
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.6e-37 160.2 106 68.9
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.0e-36 157.5 155 58.7
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 5.1e-36 155.2 147 60.5
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 2.5e-35 152.9 113 71.7
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.1e-30 137.5 186 47.8
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 6.6e-28 128.3 132 55.3
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 4.8e-26 122.1 121 53.7
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 1.8e-20 103.6 121 47.1
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.9e-19 100.1 71 67.6
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.6e-18 97.1 152 44.1
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.3e-15 87.4 45 86.7
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.2e-15 86.7 98 51.0
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.9e-15 86.3 58 74.1
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.3e-12 77.4 95 50.5
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.3e-12 77.4 95 50.5
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.3e-12 76.6 114 43.9
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 8.7e-12 74.7 37 91.9
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.2e-07 60.1 42 59.5
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.2e-06 56.2 52 53.8


User provided reference genes

Program Settings