Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0007641 Rosa chinensis HOM05D013659 ORTHO05D012679 7.2e-59 230.3 113 100.0
FvH4_3g28461 Fragaria vesca HOM05D000003 ORTHO05D014631 5.0e-12 74.7 92 39.1
RcHm_v2.0_Chr3g0477221 Rosa chinensis HOM05D013659 ORTHO05D012679 5.0e-12 74.7 92 42.4
RcHm_v2.0_Chr3g0481921 Rosa chinensis HOM05D000003 ORTHO05D000004 4.3e-11 71.6 81 40.7
FvH4_2g12622 Fragaria vesca HOM05D012422 ORTHO05D012874 2.8e-10 68.9 77 42.9
FAN06G4530 Fragaria x ananassa HOM05D013659 ORTHO05D012679 1.4e-09 66.6 83 43.4
FAN06G4742 Fragaria x ananassa HOM05D013659 ORTHO05D012679 1.4e-09 66.6 83 43.4
FAN19G2126 Fragaria x ananassa HOM05D001715 ORTHO05D012679 3.1e-09 65.5 79 40.5
RcHm_v2.0_Chr7g0227851 Rosa chinensis HOM05D008833 ORTHO05D000167 3.1e-09 65.5 74 41.9
FvH4_6g21812 Fragaria vesca HOM05D012422 ORTHO05D000167 5.2e-09 64.7 72 38.9
RcHm_v2.0_Chr4g0389021 Rosa chinensis HOM05D000003 ORTHO05D000167 5.2e-09 64.7 79 35.4
FvH4_1g26014 Fragaria vesca HOM05D000003 ORTHO05D000006 6.8e-09 64.3 76 40.8
FvH4_3g30011 Fragaria vesca HOM05D008833 ORTHO05D010662 2.6e-08 62.4 57 43.9
FvH4_4g07171 Fragaria vesca HOM05D008833 ORTHO05D012679 3.4e-08 62.0 60 41.7
RcHm_v2.0_Chr5g0044911 Rosa chinensis HOM05D013659 ORTHO05D012679 4.4e-08 61.6 83 36.1
FvH4_3g22561 Fragaria vesca HOM05D000003 ORTHO05D000006 5.8e-08 61.2 83 34.9
FvH4_6g30441 Fragaria vesca HOM05D002778 ORTHO05D012874 1.7e-07 59.7 79 41.8
FAN02G1338 Fragaria x ananassa HOM05D013134 ORTHO05D012679 2.9e-07 58.9 84 32.1
FAN16G0153 Fragaria x ananassa HOM05D013659 ORTHO05D012679 2.9e-07 58.9 63 38.1
RcHm_v2.0_Chr1g0346251 Rosa chinensis HOM05D000003 ORTHO05D000004 3.7e-07 58.5 83 32.5
RcHm_v2.0_Chr7g0206951 Rosa chinensis HOM05D013659 ORTHO05D012679 3.7e-07 58.5 88 34.1
RcHm_v2.0_Chr4g0415961 Rosa chinensis HOM05D000003 ORTHO05D000167 4.9e-07 58.2 83 39.8
FvH4_3g02851 Fragaria vesca HOM05D013659 ORTHO05D012679 1.4e-06 56.6 89 31.5
FAN25G0905 Fragaria x ananassa HOM05D012422 ORTHO05D012874 1.4e-06 56.6 81 39.5
FvH4_2g13902 Fragaria vesca HOM05D012422 ORTHO05D012874 2.4e-06 55.8 77 39.0
RcHm_v2.0_Chr4g0410641 Rosa chinensis HOM05D000003 ORTHO05D000004 2.4e-06 55.8 83 34.9
FvH4_1g18911 Fragaria vesca HOM05D009322 ORTHO05D010713 3.2e-06 55.5 82 32.9
RcHm_v2.0_Chr3g0471531 Rosa chinensis HOM05D065238 ORTHO05D012679 3.2e-06 55.5 70 30.0
FvH4_4g21351 Fragaria vesca HOM05D012422 ORTHO05D012874 4.1e-06 55.1 75 33.3
RcHm_v2.0_Chr2g0144601 Rosa chinensis HOM05D013659 ORTHO05D012679 5.4e-06 54.7 50 44.0
Manes.12G101201 Manihot esculenta HOM05D000003 ORTHO05D000004 7.1e-06 54.3 82 29.3
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 9.2e-06 53.9 82 29.3


User provided reference genes

Program Settings