Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 3.3e-261 904.4 431 100.0
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 1.2e-239 832.8 427 93.0
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.4e-235 819.3 433 91.5
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 3.9e-222 774.6 438 87.0
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 4.2e-216 754.6 441 84.8
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 1.8e-214 749.2 426 83.6
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 1.1e-213 746.5 411 84.7
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 5.1e-206 721.1 424 80.7
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 3.7e-196 688.3 411 77.9
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 1.4e-192 676.4 425 74.6
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 2.5e-192 675.6 433 74.6
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 4.2e-192 674.9 426 74.9
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 8.8e-190 667.2 427 73.3
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 3.3e-189 665.2 434 73.7
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 1.4e-187 659.8 431 73.3
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 3.1e-187 658.7 409 75.1
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 4.1e-187 658.3 405 76.5
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 9.1e-187 657.1 420 73.3
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.2e-186 656.8 406 76.8
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 2.0e-186 656.0 406 76.6
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 4.5e-186 654.8 407 75.4
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.0e-185 653.7 406 76.4
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 1.7e-185 652.9 414 73.7
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 3.8e-185 651.7 426 72.1
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 6.5e-185 651.0 431 70.1
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 8.5e-185 650.6 411 73.7
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 2.5e-184 649.0 433 73.2
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 9.4e-184 647.1 406 74.4
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 2.1e-183 646.0 433 69.7
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 1.4e-179 633.3 403 71.7
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 5.3e-179 631.3 387 73.9
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 1.6e-178 629.8 385 73.8
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 3.5e-178 628.6 427 71.0
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 4.5e-178 628.2 406 73.4
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 5.9e-178 627.9 418 71.8
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 1.0e-177 627.1 404 72.3
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 1.0e-177 627.1 406 71.9
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 1.0e-177 627.1 426 70.2
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 1.3e-177 626.7 389 73.8
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 3.8e-177 625.2 394 75.9
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 3.8e-177 625.2 462 66.2
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 6.5e-177 624.4 397 72.5
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 2.5e-176 622.5 427 70.5
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 4.2e-176 621.7 392 74.7
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 5.5e-176 621.3 399 71.2
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 1.2e-175 620.2 400 71.8
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 1.2e-175 620.2 434 68.7
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 1.6e-175 619.8 400 71.2
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 2.1e-175 619.4 395 72.2
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 4.7e-175 618.2 396 71.5
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 4.7e-175 618.2 389 72.8
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 4.7e-175 618.2 417 71.7
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 4.7e-175 618.2 422 69.7
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 1.0e-174 617.1 425 67.8
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 1.0e-174 617.1 398 72.9
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 1.4e-174 616.7 434 68.2
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 1.8e-174 616.3 418 69.4
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 4.0e-174 615.1 422 69.2
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 6.7e-174 614.4 392 74.2
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 1.5e-173 613.2 422 69.2
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 2.6e-173 612.5 401 70.6
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 2.6e-173 612.5 401 70.6
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 3.3e-173 612.1 396 73.2
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 9.7e-173 610.5 402 70.4
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 2.2e-172 609.4 403 70.2
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.8e-172 609.0 386 72.0
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 4.8e-172 608.2 416 69.0
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.1e-171 607.1 429 66.7
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 1.4e-171 606.7 423 68.6
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 1.8e-171 606.3 413 69.0
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.6e-170 603.2 406 69.5
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 1.6e-170 603.2 431 67.3
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 4.5e-170 601.7 350 79.1
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 7.7e-170 600.9 470 63.8
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.7e-169 599.7 404 69.6
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 1.5e-168 596.7 422 68.0
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 4.2e-168 595.1 386 73.1
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 4.7e-167 591.7 424 67.7
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 3.0e-166 589.0 395 68.9
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 8.8e-166 587.4 413 69.5
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 7.7e-162 574.3 370 72.7
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 5.0e-161 571.6 403 67.0
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 8.0e-159 564.3 380 68.9
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 1.4e-158 563.5 367 69.8
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 3.4e-157 558.9 421 62.9
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 1.7e-153 546.6 428 62.9
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 5.0e-153 545.0 380 68.4
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 1.9e-147 526.6 427 62.5
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 2.5e-144 516.2 377 62.6
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 7.0e-139 498.0 389 62.7
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 1.9e-136 490.0 401 55.6
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 2.5e-136 489.6 372 61.8
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 1.6e-135 486.9 337 67.1
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 7.8e-130 468.0 327 67.3
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 3.0e-129 466.1 315 71.1
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.1e-128 464.2 417 56.6
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 1.5e-128 463.8 295 75.6
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 7.6e-125 451.4 357 57.7
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 1.3e-124 450.7 322 67.7
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 6.2e-119 431.8 437 52.2
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 3.0e-113 412.9 372 51.9
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 1.5e-109 400.6 365 52.1
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 1.9e-99 367.1 256 68.8
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 1.0e-92 344.7 245 67.3
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 6.7e-89 332.0 411 43.8
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.8e-86 323.9 278 54.7
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 5.0e-84 315.8 179 80.4
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 8.5e-84 315.1 307 53.4
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 1.4e-83 314.3 394 43.4
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 6.1e-82 308.9 470 40.9
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.8e-78 297.4 171 77.8
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.8e-78 297.4 171 77.8
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.6e-66 257.7 150 78.0
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 2.9e-52 210.3 225 55.1
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 7.2e-51 205.7 127 77.2
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 4.0e-49 199.9 140 67.1
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.2e-45 188.3 103 81.6
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 2.0e-45 187.6 293 36.9
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 3.0e-41 173.7 123 63.4
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 9.8e-40 168.7 115 70.4
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 4.9e-39 166.4 93 80.6
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 4.9e-39 166.4 99 76.8
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 1.7e-36 157.9 89 77.5
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 5.2e-33 146.4 100 65.0
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 1.2e-29 135.2 80 71.2
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 2.9e-23 114.0 164 43.3
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 1.1e-22 112.1 213 37.1
AL117U10020 Arabidopsis lyrata HOM05D064442 ORTHO05D011622 2.3e-20 104.4 75 62.7
FAN22G0904 Fragaria x ananassa HOM05D002999 ORTHO05D003137 3.3e-11 73.9 327 23.9
CSS0013325 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 6.2e-10 69.7 77 49.4
Pp3c10_3720 Physcomitrium patens HOM05D002999 ORTHO05D003137 8.1e-10 69.3 350 22.9
Pp3c2_19830 Physcomitrium patens HOM05D002999 ORTHO05D003137 2.4e-09 67.8 252 26.6
AagrBONN_evm.TU.Sc2ySwM_228.3731 Anthoceros agrestis HOM05D002999 ORTHO05D003137 6.8e-09 66.2 235 24.3
Hma1.2p1_0643F.1_g194600 Hydrangea macrophylla HOM05D002999 ORTHO05D003137 1.2e-08 65.5 349 22.1
Nitab4.5_0004238g0040 Nicotiana tabacum HOM05D002999 ORTHO05D003137 2.0e-08 64.7 208 26.9
AagrBONN_evm.TU.Sc2ySwM_362.297 Anthoceros agrestis HOM05D002999 ORTHO05D003137 2.6e-08 64.3 348 20.7
AUR62043984 Chenopodium quinoa HOM05D002999 ORTHO05D003137 3.4e-08 63.9 327 22.6
HanXRQChr09g0256871 Helianthus annuus HOM05D002999 ORTHO05D003137 1.3e-07 62.0 238 23.9
HanXRQChr15g0466521 Helianthus annuus HOM05D002999 ORTHO05D003137 1.3e-07 62.0 238 23.9
HanXRQChr00c0537g0575611 Helianthus annuus HOM05D002999 ORTHO05D003137 1.7e-07 61.6 238 23.5
FAN07G0959 Fragaria x ananassa HOM05D002999 ORTHO05D003137 2.2e-07 61.2 246 24.8
Nn4g26096 Nelumbo nucifera HOM05D002999 ORTHO05D003137 2.2e-07 61.2 238 25.2
Potri.014G136000 Populus trichocarpa HOM05D002999 ORTHO05D003137 2.2e-07 61.2 357 22.1
FvH4_4g16870 Fragaria vesca HOM05D002999 ORTHO05D003137 2.9e-07 60.8 246 24.8
Sc19g0004770 Simmondsia chinensis HOM05D002999 ORTHO05D003137 4.9e-07 60.1 354 22.6
unitig_749.g14054 Utricularia gibba HOM05D002999 ORTHO05D003137 4.9e-07 60.1 150 31.3
Sabra14G0102500 Salix brachista HOM05D002999 ORTHO05D003137 6.4e-07 59.7 151 29.8
Zm00001eb354420 Zea mays HOM05D002999 ORTHO05D003137 8.4e-07 59.3 242 23.1
Ciclev10019830m.g Citrus clementina HOM05D002999 ORTHO05D003137 1.1e-06 58.9 358 21.8
ECA247G2129 Erigeron canadensis HOM05D002999 ORTHO05D003137 1.4e-06 58.5 238 24.4
SalBow2G2809 Salvia bowleyana HOM05D002999 ORTHO05D003137 1.9e-06 58.2 150 29.3
Nn3g21213 Nelumbo nucifera HOM05D002999 ORTHO05D003137 2.4e-06 57.8 150 29.3
AUR62034587 Chenopodium quinoa HOM05D002999 ORTHO05D003137 5.4e-06 56.6 353 20.4
AUR62036682 Chenopodium quinoa HOM05D002999 ORTHO05D003137 7.1e-06 56.2 165 28.5


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