Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0005651 Rosa chinensis HOM05D014406 ORTHO05D015627 2.2e-60 235.3 112 100.0
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 1.0e-36 156.8 102 72.5
RcHm_v2.0_Chr7g0229351 Rosa chinensis HOM05D009322 ORTHO05D010713 3.6e-26 121.7 98 52.0
RcHm_v2.0_Chr4g0415961 Rosa chinensis HOM05D000003 ORTHO05D000167 3.3e-24 115.2 95 52.6
RcHm_v2.0_Chr2g0147661 Rosa chinensis HOM05D000003 ORTHO05D010713 1.3e-23 113.2 105 48.6
RcHm_v2.0_Chr5g0012401 Rosa chinensis HOM05D000003 ORTHO05D010713 3.7e-23 111.7 104 49.0
FvH4_4g14101 Fragaria vesca HOM05D000003 ORTHO05D000006 1.4e-22 109.8 109 47.7
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 4.5e-21 104.8 98 51.0
FAN22G2408 Fragaria x ananassa HOM05D014406 ORTHO05D010713 1.3e-20 103.2 95 49.5
RcHm_v2.0_Chr7g0217171 Rosa chinensis HOM05D000003 ORTHO05D000167 3.2e-19 98.6 101 44.6
RcHm_v2.0_Chr2g0109541 Rosa chinensis HOM05D009322 ORTHO05D010713 7.2e-19 97.4 73 67.1
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 2.7e-18 95.5 86 47.7
FvH4_2g16581 Fragaria vesca HOM05D014406 ORTHO05D046462 3.6e-18 95.1 97 45.4
FvH4_1g18911 Fragaria vesca HOM05D009322 ORTHO05D010713 4.7e-18 94.7 101 44.6
FAN24G0116 Fragaria x ananassa HOM05D014406 ORTHO05D010713 1.4e-17 93.2 98 44.9
FvH4_5g18832 Fragaria vesca HOM05D000003 ORTHO05D000006 3.0e-17 92.0 98 44.9
FvH4_6g32473 Fragaria vesca HOM05D000003 ORTHO05D010713 1.7e-15 86.3 84 44.0
FvH4_2g09182 Fragaria vesca HOM05D000003 ORTHO05D045492 2.8e-15 85.5 82 47.6
FvH4_4g06602 Fragaria vesca HOM05D009322 ORTHO05D010713 2.8e-15 85.5 97 44.3
RcHm_v2.0_Chr1g0346251 Rosa chinensis HOM05D000003 ORTHO05D000004 4.8e-15 84.7 94 40.4
RcHm_v2.0_Chr5g0016681 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-14 83.6 93 47.3
FvH4_6g12311 Fragaria vesca HOM05D000003 ORTHO05D000004 2.4e-14 82.4 88 44.3
FvH4_7g09302 Fragaria vesca HOM05D015505 ORTHO05D000167 3.1e-14 82.0 91 44.0
FvH4_5g24951 Fragaria vesca HOM05D014406 ORTHO05D010713 1.2e-13 80.1 68 52.9
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-12 76.6 91 42.9
RcHm_v2.0_Chr7g0226691 Rosa chinensis HOM05D009383 ORTHO05D011656 5.0e-12 74.7 94 41.5
FvH4_1g27452 Fragaria vesca HOM05D009322 ORTHO05D010713 2.5e-11 72.4 103 38.8
FAN02G3264 Fragaria x ananassa HOM05D014406 ORTHO05D035495 5.5e-11 71.2 83 39.8
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 7.2e-11 70.9 94 38.3
CANSAT21G2087 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-10 70.1 99 35.4
FAN05G0083 Fragaria x ananassa HOM05D014406 ORTHO05D010713 1.2e-10 70.1 73 39.7
vmacro11570 Vaccinium macrocarpon HOM05D004336 ORTHO05D005367 1.2e-10 70.1 87 39.1
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.6e-10 69.7 106 32.1
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-10 69.7 89 41.6
Atru.chr5.2963 Acer truncatum HOM05D000003 ORTHO05D000006 2.1e-10 69.3 91 39.6
AUR62035351 Chenopodium quinoa HOM05D000003 ORTHO05D000167 2.7e-10 68.9 101 32.7
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.7e-10 68.9 91 34.1
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 3.6e-10 68.6 95 38.9
RcHm_v2.0_Chr5g0072911 Rosa chinensis HOM05D000003 ORTHO05D011656 3.6e-10 68.6 95 35.8
vmacro08440 Vaccinium macrocarpon HOM05D003860 ORTHO05D004218 3.6e-10 68.6 101 38.6
Atru.chr12.998 Acer truncatum HOM05D000003 ORTHO05D000167 4.7e-10 68.2 94 37.2
Haze_16342 Corylus avellana HOM05D032658 ORTHO05D000167 4.7e-10 68.2 93 36.6
FAN12G1204 Fragaria x ananassa HOM05D031349 ORTHO05D010713 4.7e-10 68.2 70 50.0
arahy.Tifrunner.gnm1.ann1.0Y1AJC Arachis hypogaea HOM05D027442 ORTHO05D000167 6.1e-10 67.8 91 38.5
FvH4_3g28461 Fragaria vesca HOM05D000003 ORTHO05D014631 6.1e-10 67.8 101 38.6
FvH4_4g11881 Fragaria vesca HOM05D000003 ORTHO05D000006 6.1e-10 67.8 60 48.3
arahy.Tifrunner.gnm1.ann1.MHV6FT Arachis hypogaea HOM05D027442 ORTHO05D007254 8.0e-10 67.4 91 38.5
Lj3g0004568 Lotus japonicus HOM05D000003 ORTHO05D007254 1.0e-09 67.0 91 37.4
Haze_12949 Corylus avellana HOM05D000003 ORTHO05D000167 1.4e-09 66.6 90 37.8
Gorai.002G144300 Gossypium raimondii HOM05D000003 ORTHO05D000167 1.4e-09 66.6 104 36.5
RcHm_v2.0_Chr2g0115441 Rosa chinensis HOM05D008133 ORTHO05D009449 1.4e-09 66.6 91 39.6
FvH4_1g28812 Fragaria vesca HOM05D000003 ORTHO05D000004 1.8e-09 66.2 63 49.2
vmacro21511 Vaccinium macrocarpon HOM05D000235 ORTHO05D000147 1.8e-09 66.2 93 39.8
Aa31LG6G10540 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-09 65.9 86 37.2
Atru.chr11.1155 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-09 65.5 103 33.0
QL10p017193 Quercus lobata HOM05D000003 ORTHO05D000167 3.0e-09 65.5 94 36.2
RcHm_v2.0_Chr4g0389021 Rosa chinensis HOM05D000003 ORTHO05D000167 3.0e-09 65.5 94 39.4
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.0e-09 65.5 102 37.3
Peaxi162Scf00139g10014 Petunia axillaris HOM05D000003 ORTHO05D000167 4.0e-09 65.1 98 34.7
Prupe.6G203400 Prunus persica HOM05D000003 ORTHO05D000167 4.0e-09 65.1 106 35.8
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 4.0e-09 65.1 90 38.9
CANSAT01G1919 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-09 64.7 90 36.7
CANSAT56G0133 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-09 64.7 97 34.0
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 6.8e-09 64.3 96 37.5
CANSAT56G1390 Cannabis sativa HOM05D000003 ORTHO05D000167 6.8e-09 64.3 91 35.2
AUR62005037 Chenopodium quinoa HOM05D000003 ORTHO05D000167 6.8e-09 64.3 107 34.6
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 6.8e-09 64.3 98 37.8
PSO170G6566 Papaver somniferum HOM05D000003 ORTHO05D001026 6.8e-09 64.3 101 35.6
Os01g0930300 Oryza sativa ssp. japonica HOM05D000003 ORTHO05D000167 8.8e-09 63.9 109 31.2
PSO541G0547 Papaver somniferum HOM05D000003 ORTHO05D001026 8.8e-09 63.9 99 36.4
AUR62024543 Chenopodium quinoa HOM05D007817 ORTHO05D010493 1.2e-08 63.5 95 34.7
FAN14G2343 Fragaria x ananassa HOM05D009322 ORTHO05D010713 1.2e-08 63.5 68 45.6
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 1.5e-08 63.2 98 36.7
FvH4_3g24370 Fragaria vesca HOM05D009322 ORTHO05D010713 1.5e-08 63.2 107 34.6
LjContig00564g0011142 Lotus japonicus HOM05D000003 ORTHO05D007254 1.5e-08 63.2 92 37.0
Atru.chr13.1037 Acer truncatum HOM05D000003 ORTHO05D000167 2.0e-08 62.8 91 36.3
Atru.chr13.1676 Acer truncatum HOM05D000003 ORTHO05D000006 2.0e-08 62.8 91 35.2
Atru.chr2.1340 Acer truncatum HOM05D000003 ORTHO05D000167 2.0e-08 62.8 96 33.3
Atru.chr4.1036 Acer truncatum HOM05D000003 ORTHO05D000167 2.0e-08 62.8 90 36.7
BolC8t50384H Brassica oleracea HOM05D000003 ORTHO05D001091 2.0e-08 62.8 102 31.4
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 2.6e-08 62.4 99 34.3
Atru.chr6.1815 Acer truncatum HOM05D000003 ORTHO05D000167 2.6e-08 62.4 93 36.6
Atru.chr8.838 Acer truncatum HOM05D000003 ORTHO05D000167 2.6e-08 62.4 87 36.8
Atru.chr9.146 Acer truncatum HOM05D000003 ORTHO05D000167 2.6e-08 62.4 90 36.7
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 2.6e-08 62.4 100 35.0
Atru.chr10.114 Acer truncatum HOM05D000003 ORTHO05D000167 3.4e-08 62.0 91 36.3
Atru.chr10.97 Acer truncatum HOM05D000003 ORTHO05D000167 3.4e-08 62.0 91 36.3
Atru.chr4.1619 Acer truncatum HOM05D000003 ORTHO05D000167 3.4e-08 62.0 91 34.1
CANSAT80G2787 Cannabis sativa HOM05D000003 ORTHO05D000167 3.4e-08 62.0 89 38.2
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 3.4e-08 62.0 102 37.3
Haze_16013 Corylus avellana HOM05D000003 ORTHO05D000167 3.4e-08 62.0 94 33.0
FvH4_6g23332 Fragaria vesca HOM05D000003 ORTHO05D000006 3.4e-08 62.0 92 37.0
FAN03G2590 Fragaria x ananassa HOM05D009322 ORTHO05D010713 3.4e-08 62.0 47 53.2
QL04p086747 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-08 62.0 87 40.2
QL04p086930 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-08 62.0 88 40.9
QL07p038559 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-08 62.0 87 36.8
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 4.4e-08 61.6 98 36.7
CSS0031820 Camellia sinensis var. sinensis HOM05D000698 ORTHO05D000004 4.4e-08 61.6 90 35.6
CANSAT11G2042 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-08 61.6 89 36.0
CANSAT56G2867 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-08 61.6 94 33.0
Haze_05932 Corylus avellana HOM05D009031 ORTHO05D000167 4.4e-08 61.6 93 38.7
Lj1g0019137 Lotus japonicus HOM05D000003 ORTHO05D007254 4.4e-08 61.6 99 33.3
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 4.4e-08 61.6 90 35.6
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 4.4e-08 61.6 90 35.6
RcHm_v2.0_Chr5g0038961 Rosa chinensis HOM05D008833 ORTHO05D000167 4.4e-08 61.6 89 39.3
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 5.7e-08 61.2 84 38.1
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 5.7e-08 61.2 91 36.3
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 5.7e-08 61.2 97 34.0
Aa31sc180G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-08 61.2 97 37.1
CANSAT01G2358 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-08 61.2 89 36.0
CANSAT11G1896 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-08 61.2 92 32.6
CANSAT21G0177 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-08 61.2 92 29.3
FAN26G2030 Fragaria x ananassa HOM05D009322 ORTHO05D010713 5.7e-08 61.2 50 52.0
Lj4g0008388 Lotus japonicus HOM05D000003 ORTHO05D007254 5.7e-08 61.2 95 36.8
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 5.7e-08 61.2 98 35.7
Atru.chr12.1749 Acer truncatum HOM05D000003 ORTHO05D000167 7.5e-08 60.8 88 37.5
Atru.chr9.1984 Acer truncatum HOM05D000003 ORTHO05D000167 7.5e-08 60.8 88 36.4
Atru.chr9.1998 Acer truncatum HOM05D000003 ORTHO05D000167 7.5e-08 60.8 88 36.4
Atru.chr9.887 Acer truncatum HOM05D000003 ORTHO05D000006 7.5e-08 60.8 98 33.7
A06p33810 Brassica napus HOM05D004976 ORTHO05D004851 7.5e-08 60.8 101 36.6
CANSAT25G0112 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-08 60.8 93 34.4
CANSAT35G1919 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-08 60.8 108 32.4
COL.COLO4_17377 Corchorus olitorius HOM05D008133 ORTHO05D009449 7.5e-08 60.8 92 37.0
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 7.5e-08 60.8 93 38.7
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-08 60.8 92 34.8
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-08 60.8 101 33.7
RcHm_v2.0_Chr5g0031531 Rosa chinensis HOM05D009322 ORTHO05D010713 7.5e-08 60.8 59 45.8
RcHm_v2.0_Chr5g0047711 Rosa chinensis HOM05D008833 ORTHO05D000167 7.5e-08 60.8 93 34.4
CANSAT78G1893 Cannabis sativa HOM05D000003 ORTHO05D000167 9.8e-08 60.5 99 33.3
CANSAT80G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-08 60.5 92 35.9
AUR62016609 Chenopodium quinoa HOM05D000003 ORTHO05D000167 9.8e-08 60.5 94 37.2
AUR62018161 Chenopodium quinoa HOM05D000003 ORTHO05D000167 9.8e-08 60.5 91 37.4
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 9.8e-08 60.5 85 42.4
FvH4_5g28071 Fragaria vesca HOM05D002778 ORTHO05D012874 9.8e-08 60.5 95 35.8
RcHm_v2.0_Chr2g0145181 Rosa chinensis HOM05D000003 ORTHO05D010713 9.8e-08 60.5 30 80.0
Atru.chr12.1060 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-07 60.1 101 34.7
Lj1g0000828 Lotus japonicus HOM05D000003 ORTHO05D000167 1.3e-07 60.1 96 35.4
Lj1g0002506 Lotus japonicus HOM05D000003 ORTHO05D007254 1.3e-07 60.1 90 36.7
QL06p046108 Quercus lobata HOM05D028670 ORTHO05D000167 1.3e-07 60.1 105 31.4
Atru.chr1.805 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-07 59.7 95 32.6
Atru.chr13.2526 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-07 59.7 79 38.0
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 1.7e-07 59.7 91 34.1
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 1.7e-07 59.7 98 35.7
Prupe.6G082500 Prunus persica HOM05D000003 ORTHO05D000167 1.7e-07 59.7 89 36.0
CANSAT25G2465 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-07 59.3 92 31.5
CANSAT56G3812 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-07 59.3 91 35.2
FvH4_6g17021 Fragaria vesca HOM05D000003 ORTHO05D000006 2.2e-07 59.3 45 57.8
Lj3g0000535 Lotus japonicus HOM05D000003 ORTHO05D007254 2.2e-07 59.3 101 36.6
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 2.2e-07 59.3 93 35.5
QL02p037441 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-07 59.3 89 33.7
Atru.chr11.235 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-07 58.9 101 30.7
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-07 58.9 101 32.7
EL10Ac3g06635 Beta vulgaris HOM05D000003 ORTHO05D000167 2.8e-07 58.9 83 43.4
CANSAT78G0730 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-07 58.9 92 34.8
Lj1g0015022 Lotus japonicus HOM05D000003 ORTHO05D000167 2.8e-07 58.9 89 38.2
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 2.8e-07 58.9 90 35.6
PSO063G0794 Papaver somniferum HOM05D000003 ORTHO05D001026 2.8e-07 58.9 96 33.3
RcHm_v2.0_Chr6g0277591 Rosa chinensis HOM05D009322 ORTHO05D010713 2.8e-07 58.9 59 47.5
Atru.chr3.843 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-07 58.5 102 31.4
Atru.chr9.663 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-07 58.5 91 35.2
BraA02t07436Z Brassica rapa HOM05D004976 ORTHO05D004851 3.7e-07 58.5 90 32.2
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-07 58.5 92 29.3
CANSAT56G2281 Cannabis sativa HOM05D000003 ORTHO05D000167 3.7e-07 58.5 92 34.8
FvH4_6g21171 Fragaria vesca HOM05D000003 ORTHO05D006737 3.7e-07 58.5 93 38.7
RcHm_v2.0_Chr5g0038031 Rosa chinensis HOM05D009322 ORTHO05D010713 3.7e-07 58.5 59 44.1
RcHm_v2.0_Chr7g0191391 Rosa chinensis HOM05D009383 ORTHO05D011656 3.7e-07 58.5 85 38.8
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-07 58.2 90 34.4
CANSAT21G1065 Cannabis sativa HOM05D000003 ORTHO05D000167 4.8e-07 58.2 96 35.4
CANSAT80G0316 Cannabis sativa HOM05D000003 ORTHO05D000167 4.8e-07 58.2 89 34.8
COL.COLO4_06385 Corchorus olitorius HOM05D000395 ORTHO05D009449 4.8e-07 58.2 98 32.7
COL.COLO4_20392 Corchorus olitorius HOM05D000003 ORTHO05D000167 4.8e-07 58.2 91 34.1
Haze_23484 Corylus avellana HOM05D062968 ORTHO05D016203 4.8e-07 58.2 106 34.0
FvH4_3g29411 Fragaria vesca HOM05D000003 ORTHO05D000006 4.8e-07 58.2 88 39.8
Lj5g0011892 Lotus japonicus HOM05D000003 ORTHO05D007254 4.8e-07 58.2 92 37.0
QL02p065736 Quercus lobata HOM05D000003 ORTHO05D000167 4.8e-07 58.2 98 34.7
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 4.8e-07 58.2 100 32.0
QL05p012625 Quercus lobata HOM05D000003 ORTHO05D000167 4.8e-07 58.2 94 34.0
QL10p036891 Quercus lobata HOM05D000003 ORTHO05D000004 4.8e-07 58.2 99 33.3
QL11p050659 Quercus lobata HOM05D002097 ORTHO05D002248 4.8e-07 58.2 92 38.0
RcHm_v2.0_Chr7g0203591 Rosa chinensis HOM05D009322 ORTHO05D010713 4.8e-07 58.2 41 63.4
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 6.3e-07 57.8 87 32.2
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-07 57.8 89 34.8
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.3e-07 57.8 91 35.2
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 6.3e-07 57.8 89 36.0
CANSAT56G3497 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-07 57.8 89 34.8
CANSAT78G2307 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-07 57.8 88 33.0
CiPaw.11G082900 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.3e-07 57.8 93 38.7
COL.COLO4_15333 Corchorus olitorius HOM05D064659 ORTHO05D000022 6.3e-07 57.8 91 33.0
COL.COLO4_20537 Corchorus olitorius HOM05D013144 ORTHO05D000022 6.3e-07 57.8 84 34.5
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 6.3e-07 57.8 90 34.4
FvH4_6g11620 Fragaria vesca HOM05D008133 ORTHO05D009449 6.3e-07 57.8 96 35.4
Sc18g0006100 Simmondsia chinensis HOM05D013236 ORTHO05D007254 6.3e-07 57.8 95 34.7
Atru.chr9.679 Acer truncatum HOM05D000003 ORTHO05D000167 8.3e-07 57.4 91 29.7
Aa31LG5G20940 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-07 57.4 89 31.5
BcaC05g28671 Brassica carinata HOM05D000003 ORTHO05D004851 8.3e-07 57.4 93 34.4
CANSAT25G1682 Cannabis sativa HOM05D000003 ORTHO05D000167 8.3e-07 57.4 89 33.7
AUR62041573 Chenopodium quinoa HOM05D000003 ORTHO05D000004 8.3e-07 57.4 95 35.8
Lj2g0007703 Lotus japonicus HOM05D000003 ORTHO05D000126 8.3e-07 57.4 88 38.6
Lj3g0010743 Lotus japonicus HOM05D000003 ORTHO05D007254 8.3e-07 57.4 89 32.6
Lj4g0023123 Lotus japonicus HOM05D000003 ORTHO05D000004 8.3e-07 57.4 86 33.7
Lj6g0015390 Lotus japonicus HOM05D000003 ORTHO05D000004 8.3e-07 57.4 96 33.3
QL04p013142 Quercus lobata HOM05D000003 ORTHO05D000167 8.3e-07 57.4 96 31.2
Atru.chr2.2051 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 57.0 93 32.3
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.0 94 36.2
Aa31sc502G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 57.0 92 35.9
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.0 95 34.7
AUR62034769 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.1e-06 57.0 94 33.0
FvH4_5g30171 Fragaria vesca HOM05D000003 ORTHO05D000006 1.1e-06 57.0 101 36.6
QL05p077379 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-06 57.0 79 40.5
RcHm_v2.0_Chr1g0348191 Rosa chinensis HOM05D000003 ORTHO05D006737 1.1e-06 57.0 98 35.7
Atru.chr10.535 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 90 34.4
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 87 34.5
Atru.chr5.1667 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 96 34.4
Atru.chr6.787 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-06 56.6 87 34.5
Atru.chr8.1648 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-06 56.6 90 32.2
CANSAT54G0125 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-06 56.6 92 31.5
Duzib187G0809 Durio zibethinus HOM05D000003 ORTHO05D000167 1.4e-06 56.6 93 31.2
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.4e-06 56.6 93 31.2
Lj5g0017569 Lotus japonicus HOM05D000003 ORTHO05D007254 1.4e-06 56.6 90 36.7
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-06 56.6 87 33.3
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-06 56.6 93 34.4
RcHm_v2.0_Chr6g0254571 Rosa chinensis HOM05D009322 ORTHO05D010713 1.4e-06 56.6 41 61.0
Sc21g0001780 Simmondsia chinensis HOM05D015356 ORTHO05D015627 1.4e-06 56.6 71 39.4
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-06 56.2 87 35.6
CANSAT21G2373 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-06 56.2 92 33.7
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-06 56.2 90 34.4
COL.COLO4_28425 Corchorus olitorius HOM05D019761 ORTHO05D009449 1.8e-06 56.2 86 33.7
Gorai.010G200800 Gossypium raimondii HOM05D026746 ORTHO05D036022 1.8e-06 56.2 93 30.1
Lj5g0023125 Lotus japonicus HOM05D000003 ORTHO05D000004 1.8e-06 56.2 86 34.9
PSO063G7282 Papaver somniferum HOM05D000003 ORTHO05D001026 1.8e-06 56.2 93 32.3
Prupe.1G179300 Prunus persica HOM05D000003 ORTHO05D006737 1.8e-06 56.2 69 43.5
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.2 90 32.2
QL04p079912 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-06 56.2 92 38.0
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.2 88 37.5
RcHm_v2.0_Chr4g0417671 Rosa chinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.2 96 31.2
vmacro07385 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 1.8e-06 56.2 87 35.6
Atru.chr11.1423 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-06 55.8 88 33.0
Atru.chr13.1294 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-06 55.8 101 31.7
Atru.chr2.2733 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-06 55.8 90 30.0
Aa31LG11G8620 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-06 55.8 96 27.1
COL.COLO4_22912 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.4e-06 55.8 102 35.3
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.4e-06 55.8 85 38.8
FvH4_2g04612 Fragaria vesca HOM05D008133 ORTHO05D009449 2.4e-06 55.8 87 36.8
Lj4g0011977 Lotus japonicus HOM05D000003 ORTHO05D000167 2.4e-06 55.8 96 35.4
QL04p016227 Quercus lobata HOM05D000003 ORTHO05D011877 2.4e-06 55.8 89 34.8
QL11p035690 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-06 55.8 87 34.5
Atru.chr3.2872 Acer truncatum HOM05D000003 ORTHO05D000167 3.1e-06 55.5 105 30.5
Atru.chr5.1665 Acer truncatum HOM05D000003 ORTHO05D000167 3.1e-06 55.5 91 33.0
Atru.chr9.1174 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-06 55.5 96 31.2
Aa31LG4G10800 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-06 55.5 92 32.6
EL10Ac6g13992 Beta vulgaris HOM05D000003 ORTHO05D000004 3.1e-06 55.5 103 34.0
CANSAT78G2528 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-06 55.5 95 31.6
AUR62034216 Chenopodium quinoa HOM05D000003 ORTHO05D000167 3.1e-06 55.5 108 32.4
AUR62037574 Chenopodium quinoa HOM05D000003 ORTHO05D000167 3.1e-06 55.5 94 31.9
COL.COLO4_22308 Corchorus olitorius HOM05D000003 ORTHO05D017149 3.1e-06 55.5 95 32.6
COL.COLO4_37225 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.1e-06 55.5 69 40.6
FvH4_6g27671 Fragaria vesca HOM05D009322 ORTHO05D010713 3.1e-06 55.5 60 45.0
Lj1g0020336 Lotus japonicus HOM05D000003 ORTHO05D007254 3.1e-06 55.5 88 38.6
Lj5g0027405 Lotus japonicus HOM05D000003 ORTHO05D007254 3.1e-06 55.5 86 36.0
Lj6g0001178 Lotus japonicus HOM05D000003 ORTHO05D000004 3.1e-06 55.5 86 36.0
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 3.1e-06 55.5 93 33.3
Nn5g30894 Nelumbo nucifera HOM05D030777 ORTHO05D000167 3.1e-06 55.5 87 34.5
PSO210G5051 Papaver somniferum HOM05D000003 ORTHO05D001026 3.1e-06 55.5 100 34.0
PSO761G0093 Papaver somniferum HOM05D000003 ORTHO05D001026 3.1e-06 55.5 91 34.1
Prupe.8G032200 Prunus persica HOM05D000003 ORTHO05D000004 3.1e-06 55.5 100 33.0
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 3.1e-06 55.5 91 30.8
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-06 55.5 105 33.3
EL10Ac2g02831 Beta vulgaris HOM05D000003 ORTHO05D000167 4.1e-06 55.1 88 37.5
CANSAT21G1802 Cannabis sativa HOM05D000003 ORTHO05D000167 4.1e-06 55.1 96 30.2
CANSAT56G4193 Cannabis sativa HOM05D000003 ORTHO05D000167 4.1e-06 55.1 91 34.1
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 4.1e-06 55.1 107 31.8
PSO541G1607 Papaver somniferum HOM05D000003 ORTHO05D001026 4.1e-06 55.1 91 30.8
QL04p095922 Quercus lobata HOM05D000003 ORTHO05D011877 4.1e-06 55.1 87 35.6
QL11p050287 Quercus lobata HOM05D000003 ORTHO05D000167 4.1e-06 55.1 90 34.4
vmacro16161 Vaccinium macrocarpon HOM05D000068 ORTHO05D000084 4.1e-06 55.1 88 31.8
Atru.chr10.418 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-06 54.7 90 35.6
Atru.chr11.827 Acer truncatum HOM05D000003 ORTHO05D000167 5.4e-06 54.7 84 38.1
Atru.chr12.2225 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-06 54.7 83 33.7
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 5.4e-06 54.7 92 32.6
Atru.chr7.658 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-06 54.7 96 32.3
Atru.chr9.1010 Acer truncatum HOM05D000003 ORTHO05D000167 5.4e-06 54.7 100 30.0
Aa31sc51G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-06 54.7 95 28.4
Ciclev10027161m.g Citrus clementina HOM05D000003 ORTHO05D000167 5.4e-06 54.7 96 33.3
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 5.4e-06 54.7 93 33.3
Gorai.003G154500 Gossypium raimondii HOM05D012953 ORTHO05D013581 5.4e-06 54.7 98 32.7
PSO063G1632 Papaver somniferum HOM05D000003 ORTHO05D001026 5.4e-06 54.7 91 31.9
PSO591G0286 Papaver somniferum HOM05D000003 ORTHO05D000004 5.4e-06 54.7 92 33.7
QL01p055468 Quercus lobata HOM05D000003 ORTHO05D000167 5.4e-06 54.7 90 30.0
QL05p015449 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-06 54.7 82 37.8
QL05p058297 Quercus lobata HOM05D008329 ORTHO05D010502 5.4e-06 54.7 99 33.3
QL11p056495 Quercus lobata HOM05D000003 ORTHO05D000167 5.4e-06 54.7 91 37.4
Rhsim01G0175900 Rhododendron simsii HOM05D001813 ORTHO05D026101 5.4e-06 54.7 96 37.5
Atru.chr11.995 Acer truncatum HOM05D000003 ORTHO05D000167 7.0e-06 54.3 91 33.0
Atru.chr12.350 Acer truncatum HOM05D000003 ORTHO05D000167 7.0e-06 54.3 105 31.4
Atru.chr8.277 Acer truncatum HOM05D000003 ORTHO05D000167 7.0e-06 54.3 88 34.1
CANSAT11G2130 Cannabis sativa HOM05D000003 ORTHO05D000167 7.0e-06 54.3 92 29.3
CANSAT64G2795 Cannabis sativa HOM05D000003 ORTHO05D000004 7.0e-06 54.3 96 30.2
CANSAT78G0193 Cannabis sativa HOM05D000003 ORTHO05D000167 7.0e-06 54.3 91 33.0
COL.COLO4_07398 Corchorus olitorius HOM05D013911 ORTHO05D019056 7.0e-06 54.3 102 29.4
Eucgr.B00966 Eucalyptus grandis HOM05D008183 ORTHO05D007254 7.0e-06 54.3 98 36.7
Gorai.013G190000 Gossypium raimondii HOM05D008766 ORTHO05D010886 7.0e-06 54.3 94 28.7
PSO017G5116 Papaver somniferum HOM05D000003 ORTHO05D000004 7.0e-06 54.3 93 32.3
QL03p029924 Quercus lobata HOM05D000003 ORTHO05D000167 7.0e-06 54.3 92 33.7
QL08p050763 Quercus lobata HOM05D000003 ORTHO05D000167 7.0e-06 54.3 89 34.8
QL10p031903 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-06 54.3 91 35.2
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 7.0e-06 54.3 98 33.7
Atru.chr1.3957 Acer truncatum HOM05D000003 ORTHO05D000167 9.1e-06 53.9 94 34.0
Atru.chr11.1957 Acer truncatum HOM05D000003 ORTHO05D000167 9.1e-06 53.9 99 30.3
Atru.chr5.2695 Acer truncatum HOM05D000003 ORTHO05D000167 9.1e-06 53.9 67 38.8
Aa31sc214G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.1e-06 53.9 102 32.4
CANSAT11G2397 Cannabis sativa HOM05D000003 ORTHO05D000167 9.1e-06 53.9 91 33.0
CANSAT64G0596 Cannabis sativa HOM05D000003 ORTHO05D000167 9.1e-06 53.9 85 34.1
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.1e-06 53.9 85 38.8
COL.COLO4_35856 Corchorus olitorius HOM05D000003 ORTHO05D000004 9.1e-06 53.9 60 46.7
FAN26G0020 Fragaria x ananassa HOM05D015505 ORTHO05D035495 9.1e-06 53.9 75 30.7
Lj1g0005496 Lotus japonicus HOM05D000003 ORTHO05D007254 9.1e-06 53.9 101 35.6
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 9.1e-06 53.9 96 36.5


User provided reference genes

Program Settings