Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0004721 Rosa chinensis HOM05D000194 ORTHO05D347115 1.0e-56 223.0 100 100.0
RcHm_v2.0_Chr7g0180121 Rosa chinensis HOM05D000194 ORTHO05D000069 4.2e-10 68.2 34 85.3
FAN08G0766 Fragaria x ananassa HOM05D000194 ORTHO05D000069 5.5e-10 67.8 34 85.3
FvH4_5g15930 Fragaria vesca HOM05D000194 ORTHO05D000069 2.1e-09 65.9 34 82.4
FAN13G1298 Fragaria x ananassa HOM05D000194 ORTHO05D000069 2.7e-09 65.5 34 79.4
FAN18G1135 Fragaria x ananassa HOM05D000194 ORTHO05D000069 3.5e-09 65.1 34 79.4
FAN04G0843 Fragaria x ananassa HOM05D000194 ORTHO05D000069 1.0e-08 63.5 34 85.3
CiPaw.11G034800 Carya illinoinensis HOM05D000194 ORTHO05D000069 5.1e-08 61.2 32 78.1
Prupe.5G183200 Prunus persica HOM05D000194 ORTHO05D000069 5.1e-08 61.2 32 78.1
CANSAT80G0328 Cannabis sativa HOM05D000194 ORTHO05D000069 2.5e-07 58.9 32 75.0
MD06G1184400 Malus domestica HOM05D000194 ORTHO05D000069 3.3e-07 58.5 32 75.0
ClCG06G016550 Citrullus lanatus HOM05D000194 ORTHO05D000069 4.3e-07 58.2 32 71.9
MELO3C017140.2 Cucumis melo HOM05D000194 ORTHO05D000069 4.3e-07 58.2 32 71.9
Eucgr.K02908 Eucalyptus grandis HOM05D000194 ORTHO05D000069 5.7e-07 57.8 32 68.8
PGR083G1768 Punica granatum HOM05D000194 ORTHO05D000069 7.4e-07 57.4 32 71.9
PGR083G2423 Punica granatum HOM05D000194 ORTHO05D000069 7.4e-07 57.4 32 71.9
CsaV3_1G001960 Cucumis sativus L. HOM05D000194 ORTHO05D000069 9.6e-07 57.0 32 68.8
MD14G1190300 Malus domestica HOM05D000194 ORTHO05D000069 1.6e-06 56.2 32 71.9
Actinidia04941 Actinidia chinensis HOM05D000194 ORTHO05D000069 3.7e-06 55.1 34 70.6
Gohir.A11G028270 Gossypium hirsutum HOM05D000194 ORTHO05D000069 4.8e-06 54.7 32 71.9
Gorai.007G034400 Gossypium raimondii HOM05D000194 ORTHO05D000069 4.8e-06 54.7 32 71.9
Sed0020735 Sechium edule HOM05D000194 ORTHO05D000069 4.8e-06 54.7 32 65.6
Gohir.D11G031500 Gossypium hirsutum HOM05D000194 ORTHO05D000069 8.2e-06 53.9 32 71.9


User provided reference genes

Program Settings